Chiloscyllium plagiosum (whitespotted bambooshark): 122551840
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Entry
122551840 CDS
T08871
Symbol
cnot9
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122551840 (cnot9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122551840 (cnot9)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122551840 (cnot9)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
122551840
NCBI-ProteinID:
XP_043550295
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All DBs
Position
7:106378648..106400925
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AA seq
298 aa
AA seq
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MHSLGAGAPVTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFG
TIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYP
FLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTV
ATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSD
NPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRGIPLPPQ
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcctgggagcgggagcgccggttactgcgctggctcaggtggatcgtgagaag
atttaccagtggatcaatgagctatccagccccgagacccgggaaaatgccttgttagaa
ctcagcaagaagagagagtcggtgcctgacctggcccccatgctctggcactcttttgga
actattgctgccctcctacaggaaattgtaaatatttatccatctatcaaccctccaact
ctcacggctcatcaatctaaccgcgtgtgtaatgcactcgcattgttgcaatgcgtagca
tcacatccagaaaccaggtcagcatttctagcagcccatatcccgctgtttctctatcca
ttcttgcacacagtcagtaagacgagaccctttgagtatctgcgactcaccagcctgggt
gttataggcgccttagtgaaaacagatgaacaggaagtcatcaacttccttttgacaaca
gaaattattcctctctgcctccggataatggagtcaggaagtgaattgtccaaaacggtt
gcaacttttattttgcagaagatcctattggatgacacaggactggcttacatctgtcag
acgtacgaacgattctctcatgtggccatgattctgggtaagatggtgctgcagctctcc
aaagagccctcagccagattgttgaagcatgtcgttcgctgctacctccgtctctccgac
aatccacgggcaagggaggcactccgacagtgcctgcctgaccagctgaaagataccacg
tttgcccaggtgctgaaagacgatactactaccaagcgttggctggcccaacttgtcaag
aatctccaggagggacaggttaccgaccctcggggaatccccctgccaccccagtga
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