Chiloscyllium plagiosum (whitespotted bambooshark): 122551950
Help
Entry
122551950 CDS
T08871
Name
(RefSeq) tubulin alpha-4A chain-like
KO
K07374
tubulin alpha
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04145
Phagosome
cpla04210
Apoptosis
cpla04530
Tight junction
cpla04540
Gap junction
cpla04814
Motor proteins
cpla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122551950
09143 Cell growth and death
04210 Apoptosis
122551950
09144 Cellular community - eukaryotes
04530 Tight junction
122551950
04540 Gap junction
122551950
09142 Cell motility
04814 Motor proteins
122551950
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122551950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122551950
03036 Chromosome and associated proteins [BR:
cpla03036
]
122551950
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpla04812
]
122551950
04147 Exosome [BR:
cpla04147
]
122551950
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122551950
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
122551950
Cytoskeleton proteins [BR:
cpla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
122551950
Exosome [BR:
cpla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122551950
Exosomal proteins of other body fluids (saliva and urine)
122551950
Exosomal proteins of colorectal cancer cells
122551950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin_C
Tubulin
DUF7281
Motif
Other DBs
NCBI-GeneID:
122551950
NCBI-ProteinID:
XP_043550455
LinkDB
All DBs
Position
7:complement(103460762..103477556)
Genome browser
AA seq
499 aa
AA seq
DB search
MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGYRPDVKNASEADDSFDTFFCETQTGK
HVPRAIFLDLEPTVIDEVRTGPYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDPVLA
RLNKLVRMSIFKTQLVTSFRSFVGGTGPGFPYLRMESLSVDYGKKSKLEFSIYPAPRIST
AVVEPYNSILTTHTTLEHTDCSFMVDNEAIYDICHKNLDIEHPGYINLNRLIGQIVSSIT
ASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVTEITSACFEPA
NQMVKCDPRHGKYMACCLLYRGDVVPKDVNVAIATVKTRRSIQFVDWCPTGFKVGINYQP
PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLNHKFDLMYAKRAFVHWYVGFKVGINYQP
PTVVPGGDLAKVQRAVCMLSNTTAIAEAWGKPLIAPMTEILTVGIQFLFCLLFGMVGNQP
AEGKELPSSAFLFLDAPML
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatctccatccatgttggccaggctggtgtccagatgggcaatgcctgc
tgggagctgtactgtttggaacatggcattcagcctgatgggtacagacctgatgtgaaa
aatgcaagcgaggctgatgactcctttgacaccttcttctgtgagacacaaactgggaaa
catgtcccccgggcaatctttctggacctggagccaactgtgatcgatgaggtccggact
ggtccctatcgtcagctgttccaccctgagcagctcatcaccgggaaggaagatgctgcc
aacaattacgcccgtgggcactacaccattggcaaggagctgattgacccagtcttagct
agacttaacaagttggtaaggatgtcgatatttaaaactcagcttgtcacatcatttaga
agtttcgtgggtggcaccggccccggtttcccttacctccggatggagagtctctcggtc
gactacggcaagaagtccaagctggagttttccatctacccggctcccaggatctccact
gctgtggtggaaccctacaactccatcctgaccactcacaccacactggaacacactgat
tgttccttcatggtggacaatgaggccatctatgacatctgccacaaaaacctggacatt
gagcatccaggctacatcaacctgaaccgtctgatcgggcaaattgtgtcatcaatcaca
gcttctctccgttttgatggggccctcaatgttgacctgacagaattccaaactaacttg
gtgccataccctcgtatccatttccctctggctacctacgccccagtcatctcagctgag
aaagcttaccatgagcagctgtcggtgaccgagatcaccagtgcctgctttgagccagca
aaccagatggtcaagtgtgaccctcgccacggcaagtacatggcttgctgcctgctctac
cgtggtgatgtggtgccaaaagacgtcaatgttgccattgccaccgtgaagaccagacgt
tccatccagtttgtggactggtgcccaactggcttcaaggttggcattaactaccagccc
cctacagtggtgcctggtggggacttggccaaagtgcagcgagctgtgtgtatgctgagc
aacaccacagccattgctgaagcctgggctcgactcaatcataagtttgatctgatgtac
gccaagcgtgcctttgtgcattggtacgtgggtttcaaggttggcattaactaccagccc
cctacagtggtgcctggtggggacttggccaaagtgcagcgagctgtgtgtatgctgagc
aacaccacggccattgctgaagcctggggaaagccactgattgctcctatgactgaaatt
ctgactgtcgggatacagtttctgttttgcttattgtttggaatggttggtaaccaacct
gctgaaggaaaggagcttcccagctcagctttcctgtttctggatgcacccatgttgtga
DBGET
integrated database retrieval system
