Chiloscyllium plagiosum (whitespotted bambooshark): 122552171
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Entry
122552171 CDS
T08871
Symbol
colgalt1b
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00310
Lysine degradation
cpla00514
Other types of O-glycan biosynthesis
cpla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122552171 (colgalt1b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
122552171 (colgalt1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cpla01003
]
122552171 (colgalt1b)
Enzymes [BR:
cpla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
122552171 (colgalt1b)
Glycosyltransferases [BR:
cpla01003
]
O-Glycan biosynthesis
O-linked Gal type
122552171 (colgalt1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
122552171
NCBI-ProteinID:
XP_043550645
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Position
8:complement(89359337..89414908)
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AA seq
503 aa
AA seq
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MDEPKSYFDEMGPKHWSDSRYEHVMKLRQAALNSARDRWADYILFLDTDNFLINPDTLNH
LIAENKTVVAPMLDSRSAYSNFWCGMTAEGYYKRTPAYVPIRKRDRLGCFPVVMVHSTML
IDLRKEASKQLAFYPPHPDYTWSFDDIIVFAFSCRQAEVQMYICNKERYGFLQVPLKLTS
TMQDEMDSFTHVHLEIMVNHPPMEPSKYLSVAPKYPDKMGFDEIFLINLKRRPDRRMRML
NSLHEQEIACKVIDAVDGRAFNSTQIKALGINMMPNYEDPYSGRPLTKGEMGCFLSHYNV
WKEIVDRGLQTSVVIEDDLRFEIFFKRRLKYLMKEVEKVALDWDLIYIGRKRMQVDHPEK
SVPGVRNLVEADYSYWTLGYVLSLQGAQKLIDAKPFTKMLPVDEFLPVMYNKHPVSEYMD
HFENRNLRAFSAEPLLIYPTHYTGDPGYVSDTETSTVWDNEKLKTDWDRAKSQKTKEQAK
IREAAQNLDMSHSPIDSASRDEL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggatgagccaaaatcctactttgacgaaatggggcctaagcattggtctgactcccgc
tatgagcatgtgatgaagctgaggcaagcagcactgaactcagccagggatcgatgggct
gattatattttgtttctcgatacagacaacttcctgatcaaccctgacaccttaaaccac
cttatagcggagaacaaaacagttgtggcacccatgttggactcgcgctctgcatattcc
aatttctggtgtggaatgactgctgagggttattacaagcggaccccagcctacgtgccc
atacggaagcgggaccgactgggctgcttcccagttgtcatggtccactccacgatgctg
atcgacctccgtaaagaggcctccaagcaactggcgttttaccctccacacccagattac
acctggtctttcgacgacatcattgtctttgctttctcatgccgacaagcagaggtccag
atgtatatctgtaataaggaacgttatgggttcctgcaggtgccactgaagttgaccagc
accatgcaggatgagatggatagcttcactcatgtccatttggagattatggtgaaccac
cctcccatggagccttccaaatacttgtctgtggcaccaaagtaccccgataagatgggc
ttcgatgagatttttctgatcaacttgaaacgccgtccagataggagaatgcgaatgctt
aattcgctgcatgagcaggagattgcatgcaaagtaattgatgctgttgatggaagggct
ttcaacagcacccagataaaggcgcttggtatcaatatgatgccaaattatgaagatcct
tactcgggccggcctttgaccaaaggggagatgggctgttttctcagtcactacaatgtc
tggaaagagattgtcgaccgaggattgcagacctctgtggtcattgaagatgatctacgg
ttcgagatcttcttcaagcggagactgaaatatttgatgaaggaagtggagaaggtagca
ctcgactgggatctgatctacattggccgaaagcggatgcaagtggatcacccagaaaag
tcagtgcctggggtccggaatttggtcgaggctgattactcctattggactctcggatat
gtcctctcactccaaggagcacagaagctcattgatgccaagccattcaccaagatgtta
cctgtggatgaatttctgcccgtgatgtataacaagcacccagtgtctgagtacatggat
cactttgagaaccgtaacctgagggctttctctgcggaaccgctcctcatctacccgacg
cattacacaggtgacccaggctatgtgagcgacacagagacctccacggtctgggacaac
gagaagctgaagacggactgggaccgcgccaagtcacagaagaccaaggaacaggcaaaa
atccgggaagcagcacagaatctggacatgtcgcattctcccattgactccgcctccaga
gatgaactgtga
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