Chiloscyllium plagiosum (whitespotted bambooshark): 122552381
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Entry
122552381 CDS
T08871
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04137
Mitophagy - animal
cpla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122552381
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122552381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122552381
03009 Ribosome biogenesis [BR:
cpla03009
]
122552381
04131 Membrane trafficking [BR:
cpla04131
]
122552381
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpla04147
]
122552381
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122552381
Ribosome biogenesis [BR:
cpla03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
122552381
Membrane trafficking [BR:
cpla04131
]
SNARE
SNARE associated proteins
Others
122552381
Autophagy
Aggrephagy
Other aggrephagy associated proteins
122552381
Exosome [BR:
cpla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122552381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_16
RNA_helicase
AAA_28
AAA_2
TIP49
NPHP3_N
Mg_chelatase
ABC_tran
Parvo_NS1
nSTAND3
AAA_33
Viral_helicase1
AAA_14
DUF815
AAA_17
ATPase
IstB_IS21
AAA_25
NACHT
AAA_7
ATPase_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
122552381
NCBI-ProteinID:
XP_043551066
LinkDB
All DBs
Position
8:104078842..104107587
Genome browser
AA seq
465 aa
AA seq
DB search
MSNAKTRPAKQPRSGLCVVDTNARASHKPPVPLVVKEFIPQGPLTLYFWAGRFDREIDIG
IPDSIGRLEILQIHTKNMKLSDDVDLERIAHDTHGHVGADLAALCSEAALQAIRKKMSII
DLEDDTIDADVLNSMAVTMDDFQWALGQSNPSALRETVVEVPTVTWEDIGGLDEVKRELQ
ELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIACECQANFVSIKGPELLTM
WFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGSAGDGGGASDRVINQILTEMDG
MSDKKNVFIVGATNRRTAFTPSAYCFGSQNVDLAYLAKITHGFSGADLTEICQRACKLAI
REAIEAEIKREQEHQTNPDVAMEDDYDPVPEIRRDHFEEAMRFGRRSVSDNDIRKYEMFA
QTLQQSRGFGNFRFPSSNPSGGQGSGDGGSGGNLYREEGDDDLYN
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgccaagaccagaccggctaaacagcctcgttctgggctttgcgtggtcgat
acaaatgctcgagcctcacacaagccccctgtgcctctggtagtgaaagagttcattcca
caaggaccattgacgctgtacttctgggcaggtcggtttgatcgggagatcgatattgga
atcccagattccatcgggagactggagatcctgcaaatccacacgaaaaacatgaagctg
tccgatgacgtggatctcgagaggattgcccatgatacccacggccatgttggcgctgac
ctggctgcgctgtgctcggaggcagcactgcaggccattcggaagaagatgagcatcatc
gatctggaggatgacaccatcgatgctgacgtccttaactccatggctgtcaccatggac
gacttccagtgggcactgggccagagtaacccgtctgctctccgtgagacggtggtagag
gtcccgactgtgacctgggaggacatcgggggtctggacgaggtgaaacgggagctgcag
gagctggtgcagtacccagtggaatacccagacaagttcctgaagttcggaatgacccct
tcgcgcggtgttctgttctacgggccccccgggtgtggcaagaccctgttagccaaggca
atagcctgcgagtgtcaggctaactttgtctccatcaaaggtcccgagttactcaccatg
tggttcggtgagtcggaagctaacgtcagggatgtgtttgacaaggcgcggcaggctgct
ccatgtatcttgttctttgatgagctggactccatcgccaagtcccggggagggagtgcc
ggtgatggtgggggagcatcagacagggtgatcaaccagatcctcactgagatggacggc
atgtcagacaagaagaacgtcttcatcgtgggggccaccaacaggaggaccgcgtttacc
ccatcggcttattgtttcggttctcagaacgtggacttggcgtatctggccaaaataacg
cacggcttctcgggggctgacctgactgagatctgccagagggcctgtaagcttgccatc
agagaggccatcgaggcggagattaaacgggaacaggagcaccaaactaacccagacgta
gccatggaagatgactacgatcctgtccccgagattcgccgtgaccactttgaggaggcc
atgaggttcggtcgccgctcagtcagtgacaacgacatcaggaaatatgaaatgtttgcg
cagacactgcaacagagcagaggcttcgggaacttcaggtttccgtccagcaatccgagt
ggcggccaggggagcggtgacggagggagtggagggaacttgtatcgcgaagagggggat
gacgatctctacaactga
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