KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122552381
Entry
122552381         CDS       T08871                                 
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04137  Mitophagy - animal
cpla04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122552381
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    122552381
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpla03019]
    122552381
   03009 Ribosome biogenesis [BR:cpla03009]
    122552381
   04131 Membrane trafficking [BR:cpla04131]
    122552381
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpla04147]
    122552381
Messenger RNA biogenesis [BR:cpla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     122552381
Ribosome biogenesis [BR:cpla03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    122552381
Membrane trafficking [BR:cpla04131]
 SNARE
  SNARE associated proteins
   Others
    122552381
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    122552381
Exosome [BR:cpla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122552381
SSDB
Motif
Pfam: AAA AAA_lid_3 Vps4_C RuvB_N AAA_5 AAA_16 RNA_helicase AAA_28 AAA_2 TIP49 NPHP3_N Mg_chelatase ABC_tran Parvo_NS1 nSTAND3 AAA_33 Viral_helicase1 AAA_14 DUF815 AAA_17 ATPase IstB_IS21 AAA_25 NACHT AAA_7 ATPase_2 AAA_22
Other DBs
NCBI-GeneID: 122552381
NCBI-ProteinID: XP_043551066
LinkDB
Position
8:104078842..104107587
AA seq 465 aa
MSNAKTRPAKQPRSGLCVVDTNARASHKPPVPLVVKEFIPQGPLTLYFWAGRFDREIDIG
IPDSIGRLEILQIHTKNMKLSDDVDLERIAHDTHGHVGADLAALCSEAALQAIRKKMSII
DLEDDTIDADVLNSMAVTMDDFQWALGQSNPSALRETVVEVPTVTWEDIGGLDEVKRELQ
ELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIACECQANFVSIKGPELLTM
WFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGSAGDGGGASDRVINQILTEMDG
MSDKKNVFIVGATNRRTAFTPSAYCFGSQNVDLAYLAKITHGFSGADLTEICQRACKLAI
REAIEAEIKREQEHQTNPDVAMEDDYDPVPEIRRDHFEEAMRFGRRSVSDNDIRKYEMFA
QTLQQSRGFGNFRFPSSNPSGGQGSGDGGSGGNLYREEGDDDLYN
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgtcaaacgccaagaccagaccggctaaacagcctcgttctgggctttgcgtggtcgat
acaaatgctcgagcctcacacaagccccctgtgcctctggtagtgaaagagttcattcca
caaggaccattgacgctgtacttctgggcaggtcggtttgatcgggagatcgatattgga
atcccagattccatcgggagactggagatcctgcaaatccacacgaaaaacatgaagctg
tccgatgacgtggatctcgagaggattgcccatgatacccacggccatgttggcgctgac
ctggctgcgctgtgctcggaggcagcactgcaggccattcggaagaagatgagcatcatc
gatctggaggatgacaccatcgatgctgacgtccttaactccatggctgtcaccatggac
gacttccagtgggcactgggccagagtaacccgtctgctctccgtgagacggtggtagag
gtcccgactgtgacctgggaggacatcgggggtctggacgaggtgaaacgggagctgcag
gagctggtgcagtacccagtggaatacccagacaagttcctgaagttcggaatgacccct
tcgcgcggtgttctgttctacgggccccccgggtgtggcaagaccctgttagccaaggca
atagcctgcgagtgtcaggctaactttgtctccatcaaaggtcccgagttactcaccatg
tggttcggtgagtcggaagctaacgtcagggatgtgtttgacaaggcgcggcaggctgct
ccatgtatcttgttctttgatgagctggactccatcgccaagtcccggggagggagtgcc
ggtgatggtgggggagcatcagacagggtgatcaaccagatcctcactgagatggacggc
atgtcagacaagaagaacgtcttcatcgtgggggccaccaacaggaggaccgcgtttacc
ccatcggcttattgtttcggttctcagaacgtggacttggcgtatctggccaaaataacg
cacggcttctcgggggctgacctgactgagatctgccagagggcctgtaagcttgccatc
agagaggccatcgaggcggagattaaacgggaacaggagcaccaaactaacccagacgta
gccatggaagatgactacgatcctgtccccgagattcgccgtgaccactttgaggaggcc
atgaggttcggtcgccgctcagtcagtgacaacgacatcaggaaatatgaaatgtttgcg
cagacactgcaacagagcagaggcttcgggaacttcaggtttccgtccagcaatccgagt
ggcggccaggggagcggtgacggagggagtggagggaacttgtatcgcgaagagggggat
gacgatctctacaactga

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