Chiloscyllium plagiosum (whitespotted bambooshark): 122552710
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Entry
122552710 CDS
T08871
Name
(RefSeq) exportin-5 isoform X1
KO
K14289
exportin-5
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122552710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpla03016
]
122552710
03036 Chromosome and associated proteins [BR:
cpla03036
]
122552710
Transfer RNA biogenesis [BR:
cpla03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122552710
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
122552710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
DUF5039
Motif
Other DBs
NCBI-GeneID:
122552710
NCBI-ProteinID:
XP_043551534
LinkDB
All DBs
Position
9:complement(26890566..26993070)
Genome browser
AA seq
1207 aa
AA seq
DB search
MSADQITTLCEQLMKAVNVIMDGGSSSRYRLEALKFCEEFKEKCPHTVQCGLRLAEKNNT
GIVRHFGLQILEHSIKFRWNGMIHRDKVQLKNSVMTLLSRGTHNIMVEEAYIKDALSRIV
VEMIKREWPQQWPDMLNEMDKLTAMGETQTELVMLILLRLVEDVVTFQTIPAQRRKDIQH
ALTQNMMQLFSFLLDILQEHTQSYKQLKADTTQENKAKAHCRVAVATLNTLAGYVDWVAL
HHITADSCKLLEVLCMLLTEPELQLEAAECLLIAISRKGKLEDRKPLLVLFSDAAMHCIL
SAAQTAHGAGLVEQHYMFLKRLCQVLTALGGQLTALWGSDKDVGQPPNFNKYLQAFLAFT
NHPSQYLRSSTQIAWCSFLRHEHVSKDPVLLEVIPQLLHATMANLLKVGFPSKSDSPSCE
YSRVDFDNDEDFNAFFNSFRAQQGETIRLSCRLSPMTGFNMASEALQYQLTAVIDVGPTM
SKTGKGLCSIFSPSFVQWDALTFFMESVMSQLFRTMEPEQLPVADGIELLKAVLSYQTHD
PLILSCILTAVSTLSPFLLHDATVLPQVLEKLFASATFEVVEESQGLQAPRTRAVKNVRR
HACSSILKMCRDHPELIMPVFEMFYAHVKRLQQDERQLTQLEKCALMESLVLLSNQFKDY
ERQKAFLEELMAPVTNLWLSEEMQRVLSDPAMFLSYIGADVTPDDPIREDPAGINRSRIS
LCVYTILGVVKRARWPTDLEEAKAGGFVVGFTPSGSPIYRNACTEHVIKLLDNLLALIRT
HNNLWLPEMLAQLSPHFTKAHDMLEVEKNAILGIPQPLLDHADAPVYKSVLERMQGFFCT
LYDNCFHILGNAGPSMLQDFFDITNFAESVINSAFVNLENIPDYRLRPVLRVFVKPLVQS
CPPEHYESVLCPILGPLFSYLLQRLSAKWVVINQRGLLEAESGAPEENPESQEMLDEQLT
RLLTRESIDLMTVCCCVKKGPESISGDMDVDDEMMNTSDGPHVGSEELTDLGKCLLKSED
ICKALLATAYSAITWSDTITCQRATLQLCWPLIKQVLSATLHSDAASWFFMSVLRGLQMH
GQHEGCLAALVNLAFMIYEALRPRYPDLKTVMQQVPQISGDALDQFDTKLLNPSSHKMGD
KRRKDLFKKLLSGCIGKPLGQKFKKEVHIKNLPTLFKKPKPQPTTPIEETNEDNVLTPLF
DPRAQDM
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggatcagatcacgacgttgtgcgaacagttgatgaaggcggtaaacgtgata
atggatggaggctcgagttcgcgctaccggctggaggccctgaagttttgtgaagagttt
aaggaaaaatgtccacacacagtgcagtgtgggctacgtttggctgagaaaaataatact
ggaattgtccgccactttggccttcagattctggagcattctataaagtttcgctggaat
ggtatgatacaccgtgataaagtccagctgaagaatagtgtgatgactcttctatcccgt
ggtactcataatattatggtggaagaagcttacattaaggatgcactttcccgaatcgta
gtagaaatgatcaaacgtgaatggccacagcagtggccagatatgctaaatgaaatggat
aaactgactgccatgggggagacacaaactgaattggtgatgttgatccttctgcgctta
gtggaagatgtggtgactttccagaccatacctgctcagcgtcgtaaggacatacagcat
gcattaactcaaaatatgatgcagctgttcagttttctcttggacatcttgcaggagcac
actcagagctacaaacagttgaaagcagacactactcaagaaaataaggccaaggcacac
tgtcgtgttgcagtagctactctgaataccctggctggatatgtggactgggttgctttg
caccatattacggctgatagctgcaagctacttgaagtcctatgtatgttattaacagaa
cccgaattgcagctcgaagcagcggaatgtctgcttattgccattagcagaaagggtaag
ctggaggatcgtaagccgcttctagtcctctttagtgatgctgccatgcactgcatttta
tcagctgcacaaacagctcatggagcagggcttgtggagcaacattacatgtttctaaag
aggctttgtcaagttcttacagccctaggtggacagctgacagcactgtggggaagcgat
aaagatgtcggccaacctcctaatttcaacaaatatttacaagcattcttggctttcacc
aatcaccctagtcagtatttaaggtcatcaactcagatagcctggtgttcgtttttaaga
catgagcatgtttctaaggaccctgtgttgctggaggtcattccacaattgttgcatgca
acaatggctaatcttctgaaggttggatttccttccaagagcgacagcccaagttgtgaa
tattcacgtgtggactttgataatgatgaagacttcaatgcatttttcaattcattccga
gctcaacaaggagagaccattagactctcttgtcgtctgtcaccaatgactgggttcaac
atggcttctgaggcactgcagtatcagctcacggcagtcattgatgttggcccaacaatg
tctaagactggcaaaggtttgtgctctatcttttcaccatcttttgtgcaatgggatgca
ttgaccttctttatggagagtgtgatgagccagctattcagaaccatggagcctgagcaa
cttccagtggcagatggaattgagctgctgaaagctgttttaagttatcaaacccatgat
ccgctcatcctgtcgtgcatcctaacagctgtgtccacactttctcccttccttctccat
gatgccactgtcttgccacaagtcctcgaaaagctctttgcatctgctactttcgaagtg
gtcgaggagagccaggggttacaggctccaagaacaagagcagtgaaaaatgttcgtagg
cacgcttgttcgtcaattctcaagatgtgcagagatcacccagaactgatcatgccggtg
tttgaaatgttctatgcccatgtcaagcgtctgcagcaagatgaacggcagcttacacag
ttggagaagtgtgctttaatggaatccctggttctcctgagcaaccagttcaaggattat
gagcgacagaaagccttcctagaggaactcatggctcctgttactaacctttggttgtct
gaggagatgcaaagagtgctttcagatccagccatgtttctttcatatattggtgcagat
gtcactccagatgatcctattagagaagacccagcaggcatcaacagatctcggatcagc
ttgtgtgtttacaccatacttggagttgtgaagcgggctcgctggcctactgacctggag
gaggcaaaggccggagggttcgtggttggattcacacccagcgggtctccgatctaccgc
aacgcctgcactgagcatgtcatcaaacttcttgacaacctgctcgccctgataaggaca
cataataacctttggctgccagagatgttggcccagctcagcccacactttacaaaagcc
catgacatgctggaggtggaaaagaatgcgattcttggtattccacagcctttgcttgat
catgctgatgctccagtgtacaaatctgtgttggaacgaatgcaagggttcttctgtact
ttgtacgacaattgttttcatatccttgggaatgctggaccaagtatgcttcaagatttt
tttgacataaccaattttgcagaatctgtaataaactccgcttttgtgaatctggagaat
attcctgactacaggctccgtccagtgctacgcgtatttgtgaaaccattagtccagtcc
tgcccacctgaacattatgaatctgtgctgtgtccaattctcggacctttgttctcctac
ttgctgcagagactaagtgccaagtgggttgtcatcaatcagaggggcctgttagaggct
gaaagtggtgctcctgaggagaatcctgaatcccaagaaatgctggatgagcaactgact
cgacttctcacgcgtgaatctattgatctaatgactgtttgctgttgtgttaagaagggc
cctgagtccatatcaggtgacatggatgtagatgacgaaatgatgaacacaagtgatggg
ccacatgttggatctgaagaactcactgaccttggaaaatgtctgctcaagtctgaggat
atctgtaaggcactgttagcaactgcctacagtgcaatcacttggagtgacaccattaca
tgtcagcgagcaacacttcaactttgctggccattgatcaaacaggtattgtctgcaacc
ctgcattctgatgcagccagttggttcttcatgagcgtgcttagagggctgcaaatgcat
ggacaacatgaagggtgcctcgcagcactggtcaatcttgctttcatgatctacgaggca
ttgagaccacgatatcccgatttaaaaacagttatgcagcaagttcctcaaatctctgga
gatgctttagaccagtttgatacaaaacttctgaacccatcatctcataaaatgggtgac
aaaagaagaaaggacctcttcaagaaactcttgtctggttgcattgggaagccacttggg
cagaaattcaaaaaagaggtgcatatcaaaaacttgcctactcttttcaagaaaccaaaa
ccacagcccaccacaccaatagaagaaactaatgaagacaatgtcctaaccccactcttt
gatccaagagctcaggacatgtga
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integrated database retrieval system
