Chiloscyllium plagiosum (whitespotted bambooshark): 122552859
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Entry
122552859 CDS
T08871
Symbol
taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpla03021
]
122552859 (taf1a)
Transcription machinery [BR:
cpla03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
122552859 (taf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
COG4_N
FANCI_S3
Motif
Other DBs
NCBI-GeneID:
122552859
NCBI-ProteinID:
XP_043551840
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All DBs
Position
9:complement(49761854..49804529)
Genome browser
AA seq
450 aa
AA seq
DB search
MDDGIAELIAERDNSTDDGPVQASSSRPEICLHLPRSILQFQNIKDAKQTGFRQTVQTCL
SGIEKAMLHHQWQTAAELMTSYFQILEDNTTRKQASTSKVIWMIGTAILQYHPNSCIEDV
SSFARKMKSIGVKHFLKICLEHAIHLLCNGKMEEAYRELSLAETWRYGENSAAQQKVLKL
IQGYRSLLDYYTWVKKNSTLHEQGDAEINSGRVQEMHNYFRQASIGLRDAVENPGVWDPF
ILSYVNLLDFYDGFEEALTVLNNYAYNSRFPPNPNAHVYLYEFLKKHNTSAKKLIKVLRI
LHQLVPSHELMLEFHSLLLQSKKKKHRKEALGVLFCLLDFSTWKENYHVWKCLIKQMKKV
IAEGHCDWIHEQWESRQDWWPAYHFSKYRAHKDFEQNESYASRKAMVAGILMGKGCKYFV
TIYQLGYKLQETKLKKMRQYIKNHSLPNKS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgggattgctgagctaatagcagaaagagataactcaactgacgatgggcct
gttcaggccagcagctcacggccagagatctgtttacacctgcctaggagtatacttcag
ttccaaaatatcaaagatgcaaagcaaactggtttccgacagacagtccaaacttgtctg
agtggcattgagaaagccatgcttcatcaccagtggcagactgctgcagaactgatgaca
agctacttccagatcttagaagacaacaccaccagaaaacaggcttctactagtaaggtc
atttggatgattggaactgcaatacttcagtatcatcccaatagctgcattgaggacgtc
agttcatttgctaggaaaatgaagagtataggagtcaaacatttcctgaagatctgcttg
gagcatgctattcacctgttgtgcaatggaaagatggaggaagcctacagggaattgtct
ctagctgaaacatggcgatatggtgaaaattctgcagctcagcaaaaagtgctgaaactc
attcagggttataggtcattgcttgactattatacatgggttaaaaagaatagtactctt
catgagcaaggtgatgccgaaatcaattcgggcagagtgcaagagatgcacaactatttc
cgacaagcctctattggtctacgtgatgctgtagaaaatcctggtgtttgggatcccttc
atactcagttatgtaaatctccttgatttctatgatggttttgaagaagcactgaccgtg
ttaaacaattatgcttataatagcagatttccaccaaacccaaatgctcatgtatatttg
tacgagttcctgaaaaaacacaatacctcggctaaaaaactgatcaaagtactgaggatc
ttgcatcagctggttccttcccatgaactgatgttagaatttcactcgctactactccaa
tcaaaaaaaaagaagcatcgtaaggaagcactgggtgtcctcttctgtcttctagatttt
tctacatggaaagaaaactaccacgtatggaaatgtttaataaaacagatgaagaaagtt
atagctgagggtcactgtgactggatccatgagcagtgggagtccagacaagactggtgg
cctgcgtatcatttcagcaaatatcgagcacacaaggattttgaacaaaatgagagctat
gcttcaaggaaagcaatggttgcaggaatcctaatggggaaaggctgcaaatactttgtc
accatttaccaactgggatataaacttcaggaaacgaaattgaagaagatgagacaatat
ataaagaatcacagtctgccaaataaatcttga
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