Chiloscyllium plagiosum (whitespotted bambooshark): 122552871
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Entry
122552871 CDS
T08871
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122552871 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpla04812
]
122552871 (sptbn1)
Cytoskeleton proteins [BR:
cpla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122552871 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
122552871 (sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
122552871
NCBI-ProteinID:
XP_043551895
LinkDB
All DBs
Position
9:55182153..55472772
Genome browser
AA seq
2360 aa
AA seq
DB search
MTAIATDYDNIDIQQQYSDVNNRWDVEEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVESEDNKEKKSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNAVIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDVSVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDYAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPSKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQAV
VAVAKELEAENYHDIKRITARKENVYRLWEYLLELLRARRHRLEMNLNLQKIFQEMLYIM
DWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVKVVNASAQKFASEGEGY
KPCDPQVIRDRVTHLEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSADYGKDLTSVIRLLSKHKAFEDEMSGRRGPLQQTIKEGEAMVSEEHFGSEKIKERIKD
IQEQWAHLEQLSAVQKKRLEEAANVHQFKADGDDIDVWMLDILRIVSSNDVGHDEYSTQA
LVKKHKDVGEEIASYRQIIDALHEQGRSLPDEYYKSPEVEGRLTDIEERYKELAELARLR
KQALQDALSQYKMFSEADACELWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQ
ASRIAVVNQIARQLIHSGHPSEKEIKAQQDKLNTRWSQFRQLVDQKKDALNSALSIQNYH
LECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLTAIEAKLDDLQKEAER
LAAEHPDQANAIMSRLSEINDVWEEMKCTLKNREESLGEANKLQQFLRDLDDFQSWLSRT
QTAIASEDMPNTLAEGEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNHLSQSHSYQLFLRDTKQAEGFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEDKINGVVETGRRLVSDGNIYSDKIQEKVDSIDERHKKNR
EAASELLMRLKDNRDLQKFLQDCQELSLWISEKMLTAQDMSYDEARNLHSKWQKHQAFMA
ELASNKEWLDKIDKDGMQLTAEKPETEVVVKEKLTALHHLWEELESTTQAKAQRLFDANK
AELFTQSCADLDKWLHNLEGQLQSDDYGKDLTSVSILLKKQQMLENQIEVRKKEVEELKS
QAQILSQEGKDIDEVDSKRTVVEKRFLQLLEPLNERKHYLLASKEIHQFNRDLEDEILWA
EERMPLATSTDHGHNLQTVQMLIKKNQTLQKEIQGHKPRIDDIFERSQSTVAADSPSAKA
IQQRLSDLRELWKLLSEETEKRHNRLVESHKAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEPSAVMMLKKHQILELAVEDYAETVHQLSKTSRALVADGHPESERISMRQSQVDKLYAG
LKDLAEERRGKLDERYRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDSVNRMADELINSGHSDAATVAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVEALQRMHTTFEHDIQALGTQVRQ
LQEDAARLQAAYAGDKADDIQKREAEVLEAWKTLLDACEARRAKLFDTGDKFRFFSMVRD
LMLWMEDVIRQIETQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKH
YASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLVLEVHQFARDAGVAEAWLLGQEPYLSS
RELGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRRQEEEERKRQPSP
QPTSQPSDESESPQQEGAREGEHVSQNGLPSDQESPRVSQTIETNEMVNGATEQRTSSKE
PSPAASPTSDRKTKTSPLQAQSATLPVKSQETPSAQMEGFLHRKHEWETHNKKASSRSWH
NVYCVINNQEMGFYKDAKNASSGITYHGEVPISLKEALCEVAVDYKKKKHVFKLKLSDGN
EYLFQAKDDEEMNSWIQAITSTVSTDKSEATPSSQSTPAASRAQTLPASVVLTGESSPGR
REKDKEKDKEKRFSLFGKKK
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaatagcaacagactacgacaacattgatattcaacagcaatatagtgatgtc
aacaatcgttgggatgtggaagaatgggataatgaaaacagctctgccagactgtttgaa
agatcccgtatcaaagctttagcagatgaacgtgaagctgttcaaaagaagactttcaca
aaatgggtaaactcacacttggcacgggtgtcttgcagaatcacagatttgtacacagac
ttgcgcgatggccgaatgctgatcaaattacttgaggtgttgtcaggagaaagacttccc
aaaccaacaaaaggacgaatgcgaattcattgtcttgaaaatgttgacaaagcccttcag
tttcttaaagagcaaagagtacatttagaaaatatgggatctcatgatatcgtggatgga
aaccaccggttgactcttggtctaatttggaccatcattctccgattccagatccaagat
atcagtgttgaatcagaagacaacaaggaaaagaaatctgcaaaagatgctttgctgtta
tggtgccagatgaaaactgcaggctatcccaatgtcaatattcacaactttaccaccagc
tggagggatggcatggcattcaatgctgttatacacaagcataggccggacttgattgat
tttgacaagcttaagaagtctaatgctcactacaatctccagaatgctttcaacctagca
gagcagcaccttgggcttaccaaactgttggaccctgaagatgtcagtgttgatcatcct
gatgaaaagtcaattattacctatgtggtgacatactaccactacttctcaaagatgaag
gccctggctgtggaaggaaagcgcattggaaaggtacttgattatgcgattgaaactgaa
aaaatgatagaaaaatatgaatcattggcatctgacctgctggagtggatcgaacagact
atcatcatcctgaacaatcgtaaatttgccaattcactggttggcgttcagcagcagcta
caagcttttaacacatatcgcactgtagaaaaaccatcaaagtttacagagaaaggaaat
ctagaagtattgcttttcactattcaaagcaaaatgagagcaaacaatcagaaagtatat
atgccaagagaaggcaaactcatctccgatatcaacaaggcctgggaaagactggaaaaa
gctgaacatgaacgagaactggcattaaggactgagttgatcagacaagaaaagctggaa
caacttgcacgtcgatttgatcgtaaagctgctatgagggaaacctggctaagtgaaaac
cagcgccttgtctctcaggacaattttggttttgatctcccagctgtggaagctgccact
aagaagcatgaagctattgagacagacattgctgcttatgaagagcgagtgcaggcagta
gtggctgtggccaaggagctcgaagcagagaattaccatgacatcaaacgcatcaccgca
cggaaagagaatgtctacagactgtgggaatacctactggaattactccgagctcgtcgt
catcgtttagagatgaatctcaacttgcaaaagatttttcaggaaatgctgtatatcatg
gactggatggatgaaatgaaggttcttttgctgtcacaagattatgggaaacatttactt
ggcgtagaggatctcctgcagaaacatgcactggtggaagctgatattgctatccaggct
gacagagtgaaagttgtcaatgcttctgctcagaaatttgcttctgaaggtgaaggttac
aaaccatgtgacccacaggttattcgtgatcgtgtgacccacctggaattctgttaccaa
gagctttgtcagctggcagctgagcgaagggctcgtttggaagagtcccgacgcctctgg
aagttcttctgggagatggcagaggaagaaggctggatccgggagaaagagcagatactt
tcatcagctgactatggcaaagatctaaccagtgtaattcgtcttctcagtaagcacaag
gcatttgaggatgaaatgagtggacggcgtggacctcttcaacaaacgataaaagaaggt
gaagcaatggtatcagaggagcactttggatcagaaaagattaaggagaggattaaagac
atccaggagcagtgggcccaccttgaacaactatctgcagttcagaaaaagcgattggaa
gaagctgctaatgttcaccagtttaaagctgatggtgatgatattgatgtgtggatgtta
gatattctgaggattgtctccagtaatgatgttggtcatgatgaatactccactcaagcc
ctagtgaagaaacacaaagatgttggtgaggagattgcgagctacagacaaatcattgat
gcactacatgaacaggggcgaagtctgccggatgagtattacaagtcaccagaagtagaa
gggaggttgactgatattgaggagcgttacaaggagttagcagaactggcacggcttcgt
aaacaagccctccaggatgcgctgtcacagtacaaaatgttcagtgaagcagatgcatgt
gaattatggattgatgaaaaggaacagtggctgaacagcatggagataccagaaaaactt
gaagatctcgaggttatccaacataggtttgaaagtctggagccagaaatgaacaaccag
gcttctcgtattgcagtggtgaaccaaattgctcgtcagttgatccacagtgggcatccc
agtgaaaaggagatcaaagcacagcaagataagctaaatacaagatggagtcaattccgt
caactagtggaccaaaagaaagatgcactcaattctgcactcagcattcagaattatcac
cttgaatgcaatgaaacaaagtcttggattagggaaaagaccaaagtcattgaatccacg
caagatctgggcaatgatcttgctggtgtcatggccctccaaaggaaattaactggaatg
gaacgtgatttgacagctattgaagctaagctagatgatctacagaaagaagctgaaaga
ctagctgctgaacatcctgatcaggcaaatgctatcatgagccgactttcagaaattaat
gatgtctgggaagaaatgaaatgtactttgaagaaccgagaagaatcacttggtgaggca
aataagcttcagcaattcctgcgcgatttggatgacttccagtcttggctttcaagaacc
caaactgctattgcttctgaagatatgcccaacactctggcagaaggggagaagctgctc
acccagcatgaaaacatcaaaaatgaaattaataattatgaagaagactaccagaaaatg
cgtgatatgggtgaaatggtaacacagggacagacagatgcacaatatatgttcttacgc
cagcgtctgcaagctttggatactggatggaatgagctgcacaaaatgtgggagaacagg
cagaatcacttgtctcaatctcattcataccaattgtttttaagagacacaaaacaagca
gaggggttcctcaacaaccaggagtacgtcttagcacacactgaaatgcccaccacactt
gagggtgctgaagctgccattaagaagcaggaggacttcatgactaccatggatgcgaat
gaagataagataaatggagtggtggagacaggcaggagactagtcagcgatggcaatatt
tattctgacaaaatccaggaaaaagttgactcaattgatgaaagacataagaagaatcgt
gaggctgccagtgaactacttatgcgccttaaggacaacagagatctgcagaagttcctt
caagactgccaggaactgtccctttggatcagtgagaagatgctcactgctcaggacatg
tcctatgatgaagcgagaaatttgcatagcaaatggcagaaacatcaggcttttatggca
gagcttgcatcaaataaagaatggctggataaaattgataaggacggcatgcagctaact
gcagagaagccagagactgaggtcgttgtgaaggaaaagctgacagcccttcaccatttg
tgggaagaactagaatccacgactcaggccaaagctcagcgtctgtttgatgccaacaaa
gcagagcttttcacccagagctgtgctgatttagacaaatggctacataacctggaagga
cagctccagtctgatgattatggcaaagaccttaccagtgtctccattctactcaagaaa
caacagatgttagaaaatcagattgaagtgcgaaagaaagaagtggaggaattgaagagt
caggctcagattttgagccaagaaggcaaagatattgatgaggtggatagcaagcgcaca
gttgtggaaaaaagatttttgcagctactcgaacccctaaatgaaaggaaacactacttg
ttggcatctaaagaaatacatcaattcaacagagatctggaggatgaaattttgtgggct
gaagaacgcatgcctcttgcaacatccactgaccatggccataacctccagactgtacag
atgctgatcaagaaaaatcagactcttcaaaaggaaattcaaggccataagccacgtatt
gatgatatattcgagagaagccaaagtacagtagctgcagattccccaagtgctaaggct
attcagcagagattatcagatctacgagaactttggaaattattgtctgaagaaacagag
aagcggcacaatcggctggtggagtctcacaaagcccaacagtactattttgatgctgca
gaggctgaagcatggatgagtgaacaagaattgtacatgatgtcggaagagaaagcgaag
gatgagccgagtgcagtgatgatgttgaaaaaacatcagattttggagctggcggtggag
gattatgctgagactgtgcatcagctttcaaagaccagcagagctctagtggcagatgga
cacccagagagtgagcgtatcagcatgcgccagtcccaggtggacaagctttatgctggc
ttgaaagatttggctgaggagagaagagggaaactggatgagaggtatcgcctttttcaa
ttaaacagggaggtggatgatttggagcaatggatagctgaacgtgaggtggtcgctgga
tcgcatgaacttgggcaggattatgagcatgttacgatgttgcaagagaggttccgtgaa
tttgctcgtgatactggtaacattggccaggagcgagttgacagtgtgaatcgtatggct
gatgagctgattaattctggacattctgatgctgccacagttgctgaatggaaagatgga
ctcaatgaggcttgggctgatctccttgagcttattgacaccagaacacagattctagca
gcttcttatgagttgcacaagttttaccatgatgccaaggagatctttggacgaattcaa
gacaagcacaagaagcttccagaggagctaggacgagatcagaacactgtggaagcgttg
cagagaatgcatacaacatttgaacatgacattcaagctcttggtactcaggtaagacag
ctgcaggaggatgctgctcgacttcaggctgcttatgctggtgacaaggctgatgacatt
caaaaacgcgaagcagaagtattggaagcgtggaagacacttcttgatgcatgtgaagct
cggagggcaaaactttttgatactggtgataagttccgtttctttagcatggtgcgtgat
ctgatgctatggatggaagatgttattcggcaaattgaaacccaagagaaaccaagagat
gtttcatcagtggaattgctaatgaacaatcaccaaggcatcaaagctgagattgatgcc
cgtaatgacagtttcactacgtgcattgaacttggcaaatctctcctggcaagaaaacat
tatgcatctgaagagattaaagagaaattgctgcaactaacggataagaggaaagaaatg
attgacaaatgggaggacaggtgggagtggctcagactagttttggaagtgcatcagttt
gctagagatgcaggtgtggcagaagcctggcttttaggccaagaaccatatctatccagt
cgagaattgggtcagagtgtggatgaagtagagaaattgattaagagacatgaggcattt
gagaaatcagcagctacatgggatgaaagattttcagcattggagagactgacgacactg
gaactgcttgaagtgcggaggaggcaagaagaggaggaaagaaagaggcagccatcccca
cagccaacctcacagccttctgacgagtctgaatcaccacaacaggaaggagctagagaa
ggagaacacgtttctcagaatggattaccatcagaccaggagtccccacgggtgtctcag
acaattgaaacaaacgagatggtgaatggtgctactgaacagagaaccagttcaaaagaa
cccagccctgcagcttcgccaacttcagatcgcaaaactaagacctcacctttgcaggct
caatctgctactttacctgttaagtcacaagaaactccttcagcacagatggaaggattc
ctacatcgcaaacatgaatgggaaacccacaacaagaaagcatcaagcagatcttggcac
aatgtgtattgtgtgataaacaatcaggaaatgggcttttataaagatgcaaagaatgct
agttcaggtatcacgtatcatggtgaggttccaattagcctaaaggaagcactctgtgaa
gtagctgttgattataagaagaagaagcacgtttttaagctaaagctgagcgatggcaat
gaatatctcttccaagctaaagatgatgaggaaatgaacagctggattcaagctatcacc
tcgactgtgtctacagacaagagtgaggcaactccaagcagtcagagtaccccagcagct
agtcgtgcacagaccctaccagccagtgttgtcttgactggggaatccagccctgggaga
cgagaaaaagacaaagagaaagacaaagagaagagattcagtctgtttggcaagaagaaa
taa
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integrated database retrieval system
