Chiloscyllium plagiosum (whitespotted bambooshark): 122552894
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Entry
122552894 CDS
T08871
Symbol
pus10
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10 isoform X1
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpla03016
]
122552894 (pus10)
Enzymes [BR:
cpla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
122552894 (pus10)
Transfer RNA biogenesis [BR:
cpla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122552894 (pus10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Rh5
Motif
Other DBs
NCBI-GeneID:
122552894
NCBI-ProteinID:
XP_043551994
LinkDB
All DBs
Position
9:complement(62281716..62359025)
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AA seq
527 aa
AA seq
DB search
MFPLKEKDRRVVQMLLSAGCCPRCILRFCSVGIQPTYRLSCKELFTELHKFLNDEEDKSK
VVEYDQPPCKKIRLLDSEKNDSDSEQNGAVKLLSSGNVLPDDEVKTCTVCLGILQDLCET
DFVKKVCAEVDSAGYHFNSLVFSVSLPPQLLVREHATWLLVKQELGQQGNILKKDDILQL
KEVYKWITHPLLSEELGVPVDGKSVFELSVVFAHPETDGDCHFLATACRECFRPTKSKQS
IFTRMAVVKALEKIKDGDFLQQFPHQLERPKSSCVIQEIQCTHDSIYVAGRYNKFSRNLP
QTPWVIDGERKMESSVEELIGEPLKKTFKVDSLNFSSSGREDVDVRALGNGRPFAIELLN
PRRATFLQNELKELQQKINSSTDKIQVRDLQIVTREAIGHMKEGEEEKTKSYSALIWTEK
AIVKNDIDFLQDLQDLKLDQKTPLRVLHRRPLAVRTRVIHNMRVEYIDLHHFRLYLKTQA
GTYVKEFVHGDFGRTQPNLGTLLNMTTDILELDVESVDVDWPPKLDE
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtttccattgaaggagaaggacaggagagttgtccagatgttgctcagtgcaggatgc
tgtcctcgatgtatactaagattctgttctgttgggattcagcctacgtacaggctttca
tgcaaggaattgttcacggagctccacaagttcttgaacgatgaagaagataaatctaag
gtagtggaatatgatcaaccaccttgtaagaagatccgattgttggattctgaaaagaat
gattctgattcagagcaaaatggagcagtcaaattgctgtccagtggaaatgtccttcct
gatgatgaggttaaaacctgcaccgtgtgtctgggcattctacaagacctatgtgaaaca
gattttgtcaaaaaggtgtgtgctgaagtggactctgctggttatcattttaacagtctc
gtattttcagtttcactgcctccccagcttttagtcagagagcatgccacgtggttgctg
gtaaaacaggaactaggacaacaagggaacattttaaaaaaggatgatattttacaactt
aaagaagtctacaagtggataactcatcctctgctttctgaggaactgggggtgcctgtg
gatgggaagagcgtatttgaactaagtgtggttttcgcacaccctgaaacagacggggat
tgccactttttggccactgcatgtcgagagtgctttagaccaacaaaaagcaagcagtcc
atattcactagaatggcagtggtgaaagctttggagaagataaaagatggtgacttcctt
caacagtttcctcatcagcttgaacgacctaaaagctcctgtgttattcaggaaattcag
tgcactcacgattcaatctatgtggcaggcagatataacaagttctccaggaatctacca
cagactccttgggtaatagacggagaaagaaaaatggagtcttcagtggaagaacttata
ggagagccgctgaaaaaaacgtttaaagtagatagtttaaacttttcctcttcaggaaga
gaagatgttgatgtcagagccttgggaaatggcaggccatttgcgattgaactgcttaac
ccacgtagagcaacttttcttcagaatgaacttaaagaacttcaacagaaaattaatagc
tctactgacaaaatccaagttcgagatttacagatagtgaccagggaggcaataggacat
atgaaagaaggtgaagaagagaagacaaagtcatatagtgccctaatatggacagagaaa
gctatagtaaagaatgatatagattttctgcaggatttacaggatctaaagcttgaccag
aaaactccattacgagttcttcaccgaaggcctctagctgtaagaacacgtgtaatacac
aatatgagagtggagtatatagatctacatcattttcgtctttatttaaagacacaggct
gggacctatgttaaagagtttgtacatggagattttggacgtacccagccaaaccttggc
accctactgaatatgacaacagatattcttgaactagacgtagagtctgtagatgttgac
tggccgccaaaattggatgagtga
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