Chiloscyllium plagiosum (whitespotted bambooshark): 122552965
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Entry
122552965 CDS
T08871
Symbol
afdna
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04517
IgSF CAM signaling
cpla04520
Adherens junction
cpla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122552965 (afdna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
122552965 (afdna)
04530 Tight junction
122552965 (afdna)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
PDZ_2
RA_3
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
122552965
NCBI-ProteinID:
XP_043552216
LinkDB
All DBs
Position
9:77894597..78135386
Genome browser
AA seq
1923 aa
AA seq
DB search
MSSREEERTKLAEIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKVAGNFATKCIRV
SSTATTQDVIETLAEKFRPDMRMLSSPRYSLYEVHVSGEERRLDQDEKPLVVQLNWNKDD
REGRFVLKNENAFLPPKKSQSNGPEKEKEGVIQNFKRTLSKKEKKEKKRREKEALMQTVD
DDRPISSGDGENSSSHLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEQRMQEFRSGD
GRPDSGGTLRIYADSLKPNIPYKTILLSTTDTSDFAVGEALDKYGLEKENPKEYCIARVV
LPPGVQQSDDKGAKETLLDDDECPLQIFRDWPSDKGTLVFQLKKRPSEHIPKNVRKQDGR
LPKGKERNDNSGYGSSLPPEKLPYLVELSPDGSDSRDKPKLYRLQLNVTDVGTEKSDENS
IQLFGPGIQPHHCDLTNMDGIVTVTPRSFDAETYVDGQHITETTMLQSGMNIQFGSSHVF
KFVDPAQNHVSMRPMDAGPMVKGQRIKSGQGSRSVQETTFDLDGDIHSGMPLTMSKSSDR
LDSEHTVSSSSSSERNVVKPIVRVEQQDYYKQEIRPQDVQGHELTLPATIEFRESSEDSF
LSAVVNYTNSSTVHFKLSPTYVLYMTCRYVLSSQYRPDMSPSERTHKVIAIVNKMVSMME
GVIQDIAQYEQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFK
YLVHCLQSDLNNYIPAFLEDPEEASPQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFS
QLFHFINMWLFNKLVTEPDSCLCSHYWGAIIRQQLGHIEAWAEKQGLELAADCHLSRIVQ
ATTLLTMDKYLAEDISNINNTCFKLNSLQLQALLQSYHCAQDEPYIPQELIENVVALAEN
TADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNIPNGLQEFLEPLCQRGFCRLT
SHSRSPGTWTVYFESADYESNFPLDTELAEPNRKEPEIITVTLKKQNGMGLSIVAAKGAG
QDKLGIYVKSVVKGGAADLDGRLAAGDQLLSVDGRSLVGLSQERAAEFMTRTGSVVTLEI
ARQGAIYHGLATLLNQPSPMMQRASDRRGTGKPRPKSEGFELYNSNPQNGTPENSPMGWT
EYSEPKKPPGDDRLLKNRADHRSSPNVANQPPSPGVKPVYSTAPTSKIQSVSTGNLCAEE
QVLPTRPEAYPIPTQTYAREYFTFPTSRSQDRVSPVPGQWQHYDDRTMMQEQTFSGTIQR
GTRSQEELHETKAFHPEKLRQEDMLRRDTEYQKDLDRKPDVWAHQITSMDSSASGQEQLN
YSSKSLPPSAIAPHKSGPGRWKTPAPNQATPVAVSQPIRMENQLPPPPPPPPVHYAVDFD
NSHSDLPLPPPPPPPPASQGSNPSSVVDRRKREDQQRWYEKEKARLEEERDRKRREQDRK
IGQMRGPPPLHITPSQPVHVTPVIQQTRPEKMASLSRPQDTVIRELQPQQQPRTIERRDL
QYITISKEQMPGSDSLSPDPWKRDAKEKMEKQQQQHLLEMLSKEIQELQNKPDRTSEEND
RLRKLMLEWQFQKRLQESKEKDDDDEEEEDDDVDATLIMQRLEVERRARTVPAISVLDLL
QDEERRRHQQLEDIRKREAEERARQDNERHRQEEEQARRETEEKRRQEEEYYTRLEAERR
RQQEEAERKLLQPDEPGLYRPPLPRNYASETQQYEFPPPPHSSNAPPPPQRNISYMKTQI
VSPDTVYTAKFVPYNDEDEEDANLSGQDKYSVTRKSYGDLPSAPKQPPFIRQPRPVSDGY
YLSNSFRPPSANANSTTPKAGVPPPPPTKPNFVPQSGSKGFGPYGGSTTSSIGANEVYKS
PREKRPEQNKGNGQEPEAPAVKGSPENLTFKERQRLFSHGQDISNKVKASRKLMELENEL
NTK
NT seq
5772 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtcgcgaggaggaacgcacgaaactggcggagatcattaaccactggaatgcc
aaccggctggacctgttcgaaatcagccaaccgaccgaggatctggaattccatggtgtg
atgagattttattttcaagacaaagtagctgggaacttcgcaacaaaatgcatcagagtg
tccagcactgctacaacacaagatgtgatagagactcttgcagagaagtttcgcccagat
atgcgtatgctgtcctcacctagatactcactttacgaagtgcatgttagtggtgaggaa
cgtaggctcgatcaggatgaaaagcctttggttgtacaactaaactggaacaaggatgat
agggagggaagatttgttttgaaaaatgaaaatgcattcctgccaccaaagaagtctcaa
agcaatggtccagaaaaggagaaagagggtgtgatccagaactttaaacggacactgtcg
aagaaggaaaagaaagagaaaaagaggcgggaaaaggaagcgttaatgcaaactgtagat
gatgatcgacctatttccagtggtgatggtgagaactcaagttcacatcttgcagcggag
gtatacaaagacatgccagagactagcttcacccgtacaatatctaaccctgaagtagtt
atgaaacgcagacgacaacaaaagttagaacaaagaatgcaagaattccgtagtggtgat
ggacggccagattcaggtggaactcttaggatttatgcagatagtttaaagccgaatata
ccatataagaccatcttgctgtccacaacagatacatcagactttgctgtaggagaagcc
cttgacaagtatggattggagaaggaaaacccaaaggaatattgtatagcacgggtagta
ttacctcctggtgtgcaacaatctgatgataaaggtgctaaagagactctgcttgatgat
gatgaatgtccgctgcagattttcagagactggccaagtgacaaaggtactttggttttt
cagttaaagaaacggccatctgaacatatcccaaagaatgtaaggaaacaagatgggagg
ttacccaaaggaaaagaaaggaatgataattcaggctacggttcttcgttgcctcctgag
aaactgccataccttgttgaactgagtcctgatggttcagattccagagataaaccaaaa
ctgtatcgtttacaactgaatgttacagatgttggcactgaaaagtcagatgagaactcc
atccagctctttggtccaggaattcaacctcatcattgtgatcttactaacatggatggc
atagtaacagttacccctcgcagttttgatgctgaaacatatgttgatggccagcacatc
actgagaccactatgttgcaaagtggcatgaacatccagtttggatcatcacatgtgttc
aagtttgtggatcctgctcagaatcatgtgagcatgagacccatggatgcaggacctatg
gtcaagggccagagaattaaatctgggcaagggtcccgaagtgtccaagaaactacattt
gatctggacggcgacattcacagtggtatgccattaactatgagcaagagttcagataga
ttggatagcgagcacacagtttccagttccagttcaagtgaacgcaatgtggtgaagcca
attgtcagagtggaacaacaagactactacaaacaagagatcagaccacaagatgtacaa
ggtcatgagttgactctgccagcaacaatagaatttcgagagagctctgaagactccttc
ctgtctgcagttgttaactacaccaatagttctactgtccatttcaagctgtctccgaca
tatgtactctacatgacttgtcgatatgtcctgtctagccagtaccgacctgatatgagc
ccttctgaacgtactcataaagttattgcaatagttaacaagatggttagcatgatggaa
ggagttattcaggatatagcacagtatgaacagaagcagaagaatattgcaggtgcactt
gccttctggatggcaaatgcatcagaacttctcaacttcatcaaacaggacagagacctg
agtagaatcacgctggatgcacaggatgtcttggctcatttggtgcaaatggctttcaaa
tacttggtacactgtcttcaatcagatctgaacaattatataccagcatttcttgaagac
ccagaggaagcaagtccacaaagacccaaaatagatgatgtcttgcacacattgacagga
gcaatgtctttgttgcgtcgttgccgtgtgaatgctgctctcaccatccaactgttctct
cagctttttcattttattaacatgtggctattcaataaactggtcacggagccagactct
tgtctttgttctcattactggggagctatcatccgacagcaacttggtcacattgaagcc
tgggctgagaaacagggcttggaattggctgcagactgtcatcttagcagaatagtacag
gcaaccacattattaacgatggataagtatttggcagaagacatttcaaatatcaacaat
acttgttttaaattgaattcattgcaattgcaagcgctacttcaaagctaccactgtgca
caggatgagccctatatccctcaggaattaattgaaaatgtagtggcattagcagagaac
acagctgatgaacttgcacggagtgatggtagagaggtgcaattggaagaggaccctgac
ctacagctaccttttctactacctgaagatggctattcctgtgatgttgttcggaatatt
cctaatggccttcaggaattcttagaaccactttgtcagagaggtttttgtagactaacc
agtcattcacgatcacctggtacatggacagtttattttgagagtgctgactatgaaagt
aattttccacttgatactgagttggctgagcctaatcgtaaagaaccagagataattact
gtgacactgaaaaagcaaaatggaatgggcctaagcattgtagctgctaagggtgcggga
caggataaactaggaatctatgttaaatctgtggtgaaaggaggagctgcagacttggat
ggtcgtttggctgccggagatcaattactgagtgtagatggtcgcagccttgtgggactt
tcacaagaaagggctgcagagtttatgacaagaactggttctgtggtcactttagaaata
gcaagacaaggagctatttaccatggtttggccactctactcaaccaaccttctccaatg
atgcagcgagcctctgatcgtcgtggcacaggcaaacctcgccccaagagtgaaggcttt
gaattgtacaacagtaatcctcagaatggaacaccagaaaattccccaatgggttggaca
gaatactctgaaccaaagaaaccacctggggatgataggctgttgaaaaaccgagcagat
catcgatctagtcctaatgttgcaaaccaacctccaagtcctggtgtcaagcctgtttat
tctaccgcacctacctcaaagattcagtcagtctccacggggaacctttgcgcagaggag
caagtattgcctacaagacctgaagcctatccaattcccacgcaaacatatgccagggaa
tatttcactttcccaacatctagatcccaagacagagtgagtcctgtgcctggacagtgg
caacactatgatgacagaacaatgatgcaggagcagacattcagtggcaccatacagcgt
ggaactcgttcacaagaagaattgcacgagacaaaagctttccacccagaaaaattgcga
caggaagatatgcttcgtagagatacagaataccagaaagacttggatcgaaagccagat
gtatgggctcatcagattacctcaatggattcaagtgcatcaggtcaagagcagctgaac
tactcttcaaaatctctcccaccaagtgcaattgctcctcataaaagtgggcctggacgc
tggaaaactccagctccaaatcaggctactccagttgcggtttcccagcccatccgaatg
gaaaatcagttgccaccacccccacctcctccaccagtacattatgcagttgactttgat
aattcccatagtgacctacccctaccaccgccaccaccaccaccacctgcttcacaagga
tcaaatccaagctctgtggttgatcgtagaaaacgagaagatcagcagcgttggtatgaa
aaagaaaaagcacggttggaggaagagcgggacaggaaacgccgtgaacaggacaggaaa
attggccaaatgaggggtccaccgcctttgcacataactccatctcaacctgttcatgtt
actccagtaatccagcaaacaaggccagaaaaaatggctagtctatcacgacctcaagat
acagtaatccgtgaactacagcctcagcaacagcctcgcactattgagcgcagggacttg
caatacattacaattagcaaagaacagatgcctgggagtgatagtctttcgcctgatccc
tggaaacgtgatgcaaaggagaaaatggagaaacaacaacagcaacacctcttggagatg
ctcagcaaagagatacaggagctacagaacaagcccgatcgtacatctgaggagaatgac
cgtcttcgcaaacttatgcttgagtggcagtttcaaaagcggctacaggagtccaaagag
aaggatgatgatgatgaagaggaagaagatgatgatgttgatgcaacacttatcatgcaa
agattggaagtggaaaggcgggcaaggactgttccagccatctcggttctagatttgttg
caagatgaagaacgcaggcgtcatcaacagctggaagatatccgaaaaagagaagcagaa
gaaagagcaaggcaagataatgagcgtcatcgtcaagaggaggagcaagcaaggagagaa
actgaagaaaagagaagacaggaagaagaatattatacgcgtttggaagctgaaaggcgt
agacagcaggaagaagctgagaggaagttactgcaacctgatgaacctggtctgtacagg
cctccccttccaaggaactatgcttctgaaacccagcagtatgagttccctcccccaccc
cattcatctaacgctcctccccctcctcagagaaacatctcttacatgaaaacacagatc
gtctcccctgacacagtttacactgccaagtttgtcccatacaatgatgaggacgaggaa
gatgcaaatctttcaggtcaggataagtactccgtcacaagaaaatcgtatggtgatctc
ccttctgcccctaagcagccgccattcattcgtcaaccccgcccggtttcagatggctac
tatctttcaaactcattccgaccaccatctgccaatgccaacagtactactccaaaagct
ggtgttccccctccccctccaaccaaaccgaacttcgtgccacagagtggttcaaaagga
tttggtccttatggcggatcaactacaagtagcattggagcaaatgaagtttacaaaagc
ccgagagagaagcgtcctgagcagaataaagggaacggccaagagccagaagcaccggct
gtgaaaggatccccagaaaatctaacatttaaagaacgtcagcgtcttttctcacatgga
caggacatttctaacaaagtgaaggcatcacgaaaactgatggaactagaaaatgagctg
aacacaaaataa
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