Chiloscyllium plagiosum (whitespotted bambooshark): 122553029
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Entry
122553029 CDS
T08871
Symbol
stxbp5a
Name
(RefSeq) syntaxin-binding protein 5a isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122553029 (stxbp5a)
Membrane trafficking [BR:
cpla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122553029 (stxbp5a)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
122553029 (stxbp5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40
Beta-prop_IFT140_1st
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Lgl_C
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
EIF3I
Synaptobrevin
Beta-prop_VPS8
WD40_like
Motif
Other DBs
NCBI-GeneID:
122553029
NCBI-ProteinID:
XP_043552394
LinkDB
All DBs
Position
9:87292199..87528943
Genome browser
AA seq
1185 aa
AA seq
DB search
MKKFNIRKVLDGLTAAAAASSSSSQPCQRPPDSDIVETLCSEHFQLCKTVRHGFPYQPSA
MAFDPVQKILAIGTQSGSLRLFGRPGVECYCQHDSAAGVIQLQFLINEGALVSALADDTL
HLWNLRQKRPAILHSLKFNKERITFCHLPFQSKWLYVGTERGNVHIVNVESFTLSGYVIM
WNKAIELSSKTHPGLIVHISDNPMDEGKLLIGFESGTLVLWDLKSKKGEYRYSYDEAIHS
VAWHHEGKQFVCSHSDGSLTIWNVKSPIKPAQIITPHGKLPKDGKKAEPCKPILKVEYRT
CKSGDPFIIFSGGLSYDTVGRRPCLTVMHGKTTAVLEMDYPIVDFLTLCETPYPSDFQEP
YAVVVLLEKDLVVVDLGQNGYPIFENPYPLDIHESPVTCCEYFADCPVDLIPALYSVGAK
QKRQGYSKKEWPINGGNWGLGTQSYPEIIITGHADGSLKFWDASAITLQVLYKMKTSKVF
EKSRNKEEKPNTDIVDEDPYAIQIITWCPESRMLCVAGVSAHVIVYKFSRQEVTTEAIQM
LEIRLLYEINDLDSPETDQIPLGAPCQGPNSQTANSQSHPSTSSSSSDGLRDNVPCLKIR
STPLKQGAGYQAEVVIQLVWVNGEPPQQISSLAVNSSYGLLVFGNCNGIAMVDYIQKTVL
LNLGTIELYGSNDPYQRQPKSPRKTRQTSGGLCDINEGSTNLDDRCKSPTSGSTSSCNSE
DEQKLPNFIERVKIKSRKLSKTVVSDIAKMSRKLSLPTELKPDLELAFRSKTRDQRFNLL
LEGTKQLKKNIWSMTSLCTHFFNVKDNSFSRSRSSSVTSIDKESREAITALHFCETYTRK
ADTCTSPCLWVGTTLGTVLVIVLNLPPGGDQRLTQPVIVSPSGTILRLKGAILRVAFLDT
TGSLINPAHEPWREPNVQEEKDDKDKCRKLRPVSVSPSSSQEINETQYAVICSEKQAKVI
SLPSQNCIYKHNITETSFVLRADIVGLNGSICLACFCANGHIMTFSLPSLRPLLDVNYLP
LTDMRIARTFCFTNNGQALYLVSPTEIQRITYSQSTCENLQEMLGELFTPVETPEAPNRG
FFKGLFGGGAQSLDREELFGESAAGKPSRSLAQHIPGTGGIEGVKGAASGVAGELARARI
ALDERGQKLSELEERTAAMLYSADTFSKHAHEMMLKCKDKKWYQF
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaacatccggaaggtgctggacggcctgacggcagcggccgccgcctcg
tcctcctcgtcgcagccctgccagcggccgcccgacagcgacatcgtcgagaccctgtgc
tccgaacacttccagctctgcaaaacggttcgtcatggatttccatatcagccttcagcc
atggctttcgatccagtgcagaaaatcctggcaattggaactcagtcgggatctttgcga
ctgtttgggagaccaggggtggagtgttactgccaacatgacagtgctgcaggagtgatt
caactgcaattcttgattaatgagggagcccttgtgagtgccttggcagatgataccttg
catctctggaatctacgtcagaaaaggcctgccatactccattctcttaaattcaacaaa
gaaaggataacattttgccatctgcccttccagagtaaatggttgtatgttggcacagaa
agaggcaatgtacatattgtcaacgtggagtctttcacactctcaggctatgttattatg
tggaataaagccattgaactatcatcaaaaactcacccaggattaattgttcacatcagt
gacaaccctatggatgaaggcaagctgttaattggtttcgaatccggaactctggtgttg
tgggaccttaaatcaaagaaaggagagtacagatacagctatgatgaggctattcattcc
gtggcttggcatcatgaaggaaaacagtttgtttgcagccattcagatggtagccttact
atctggaatgtaaaatctcccatcaaacctgcacaaattattacaccacatggaaagctg
ccaaaagatgggaagaaagcagagccttgcaaacccatcctcaaagtggaatatagaacc
tgtaaatctggagatcctttcatcattttctcaggaggtctgtcctatgatacagtaggc
agaagaccatgcttgacggtgatgcatgggaagaccactgcagtacttgagatggactat
ccgattgtcgattttctcaccctctgtgaaacgccatatcctagcgattttcaggagcct
tatgcggtcgttgtccttctggaaaaggacttggtagttgtggatcttggacaaaatggt
tatcctatatttgagaacccataccctttggatatacatgaatcacctgtcacctgttgc
gagtattttgctgactgccctgtggatttaattcctgcactttattctgttggggcaaag
cagaaacggcaaggatacagtaaaaaggaatggcccatcaatggaggtaattggggttta
ggcacgcagagctacccagagattattattacagggcatgcagatggatcattgaagttc
tgggatgcgtctgccataacattacaagttttgtataaaatgaaaacatccaaggtattt
gaaaaatctcggaataaggaggagaaaccaaacacagacatagtggatgaagacccttat
gccattcaaataatcacatggtgtcctgaaagcagaatgctgtgcgtggcaggagtatca
gcacatgtaatcgtttacaaattcagcagacaggaagtgacaacagaggctattcagatg
ctcgaaatacgattgctttatgaaataaatgatctagactcaccagaaaccgatcaaata
cctttgggagcaccatgccaggggccaaactctcagactgcaaattctcagtctcatccc
tctacaagcagcagctcatctgatggtcttcgtgataacgtgccctgtttaaaaattaga
agtactccattaaaacaaggggcaggctatcaagctgaagtggtaattcaattggtttgg
gttaatggcgaacctccacagcagatcagcagcctggcagtgaattcatcgtatggactt
ttggtgtttggaaactgtaatggcattgcaatggttgattacattcagaaaactgtacta
ctaaatctgggcacgattgaactatatggatcaaatgatccttatcagaggcaaccaaag
tccccacgcaaaacacgacaaacttcaggaggtctctgtgatattaacgagggttcaaca
aatctagatgaccgctgcaagtctcccacatcaggttctacctcttcatgcaattctgaa
gatgaacaaaaattgcctaactttatagaaagggtgaaaatcaaaagcagaaaattatcc
aagaccgtagtatctgatatagcgaagatgtcaagaaaactaagcttgccgactgaactg
aagcctgacttggagcttgcatttaggtcaaagaccagagaccaacgctttaatctcctg
cttgaaggaacaaagcagcttaaaaaaaatatttggagtatgacttctctatgcacacat
ttttttaatgtgaaagacaactctttcagccgttcccggagttcaagtgttaccagcatc
gacaaggagtcccgagaggcaatcacagctcttcacttctgcgagacgtacacccgaaag
gcagacacatgtacatccccatgtttatgggttgggactacacttggcactgtactggtc
atagtactgaatctgccacctggaggagatcagagacttactcagccggtcatagtgtct
cccagtggaactatattgagactaaaaggtgcaattttgagagtagcgtttctggacacc
actggaagcctcatcaatccagcacatgaaccctggagagaaccaaatgtgcaagaagag
aaggatgacaaggataaatgtagaaaactgaggccagtatctgtgtctccctcatcctct
caggagataaatgaaacccagtacgcagtgatatgttcagaaaaacaggcaaaagttatc
tcattgccatcccaaaactgtatttataaacacaacataactgaaacatcatttgttctt
cgtgctgatattgtgggattgaatgggagcatctgtcttgcatgcttctgtgccaatgga
catatcatgacattcagcttgccaagccttagaccattgctagatgtcaattatttacca
ctgacggatatgcgaatagctcgtactttctgtttcaccaacaatggacaggctctatat
ctggtttcccctaccgagatccagcgcatcacctacagtcagagcacatgtgagaattta
caggaaatgcttggcgaactattcactcctgtggaaacaccagaagctccaaacagagga
ttctttaaaggcttgtttggtggtggtgcacagtcactggacagagaagaactttttggt
gaatctgcagcagggaaaccttcgaggagcctagctcagcatatcccagggactggtgga
attgaaggtgttaaaggagcagcatctggtgttgcaggtgagctggcacgggccagaata
gcacttgatgaaagaggacaaaaactgagtgagttggaagaacgaacagcagccatgtta
tacagtgctgacactttctctaaacatgctcatgagatgatgttgaagtgcaaagataag
aagtggtaccagttctga
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