Chiloscyllium plagiosum (whitespotted bambooshark): 122553366
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Entry
122553366 CDS
T08871
Symbol
gtf2a1
Name
(RefSeq) transcription initiation factor IIA subunit 1 isoform X1
KO
K03122
transcription initiation factor TFIIA large subunit
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122553366 (gtf2a1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpla03021
]
122553366 (gtf2a1)
Transcription machinery [BR:
cpla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIA
122553366 (gtf2a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIA
DDHD
CCD97-like_C
Hamartin
Pox_Ag35
Baculo_PP31
PPP4R2
Motif
Other DBs
NCBI-GeneID:
122553366
NCBI-ProteinID:
XP_043552913
LinkDB
All DBs
Position
10:7599031..7669504
Genome browser
AA seq
418 aa
AA seq
DB search
MASSANSNPVPKLYRSVIEDVINDVREQFLDDGVDEQVLIELKTLWESKLMQSKAVDGFH
SEEQQILIQAQQQQQQQQQQQHQQHHQQQQQQQQQQQQQHQHQAQPQQTQQVLTIPANSV
FSSSHKSGPQVIMQDGKLIQHMNPTGMSAAATAATLALPAGVPTPYQLSNGPILTNAGQL
LQFVRAPNGAHYFFQPHQQVVLAQSVTQQQVIQQMQSGGVQAPVIQQMLAPLPPGSIPQQ
TGVIIQPQQILVAGNKVPSNTQVMQATTVAATPSTQVGQTNSSAPVQQQPQQQQQQQQQQ
QQQQQPQPPLVVQVDGSGDTSSEEDEDDEEDEYDDEEEEKDKEEVGEDGQVEEEPLNSED
DVSDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYVFSKAIGDAEW
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcgagttcggccaactcaaacccggtgcctaaactctacagatcagtaattgaagat
gtaatcaatgatgtacgagaacaattccttgatgatggagtggatgaacaagttcttata
gaattaaaaacgctatgggagagcaagctaatgcagtcaaaagctgttgacggtttccac
tcagaggagcaacagattttaattcaggcgcagcagcagcagcagcaacagcagcagcaa
caacaccagcagcaccaccagcagcagcagcaacaacaacagcaacagcagcagcaacat
cagcatcaggctcagccgcaacagacacagcaagtgctcacaatacctgctaattcagtt
ttctcatcttctcataaatcaggaccgcaagttattatgcaagatggaaaactaatacaa
cacatgaatccgactggcatgagtgcagctgccactgcagcaactctggcattaccagcc
ggtgttccaactccctaccagctttctaatggaccaatcctaacgaatgcagggcaactg
ctgcagtttgtacgagctcctaatggagcccactactttttccagccacaccagcaagtt
gtacttgcacaatcggtgactcagcagcaggttattcagcagatgcagtctggtggtgtg
caggcacctgtcatacagcagatgctggctccactgccacctggaagtatccctcagcag
actggagtgatcattcaaccccagcaaattcttgttgcagggaacaaggtcccttcaaac
acacaggttatgcaagccaccactgtagcagcaaccccttcaacacaggttggtcaaaca
aacagctccgctcccgttcagcagcagccacagcaacaacagcagcagcagcaacagcag
cagcagcagcaacaaccacaaccccctttagtggtgcaagtagatggctctggagacact
tcttcggaggaagatgaggacgacgaagaggatgagtatgacgatgaggaagaagaaaaa
gacaaggaggaggttggggaagatgggcaagttgaagaggaaccactcaacagtgaagat
gatgtcagtgatgaagagggccaagaactctttgacacagaaaatgttgttgtctgccag
tatgataagatccaccggagtaagaataaatggaagttccacctgaaggatgggatcatg
aacctgaatgggagagattatgtgttttccaaagccatcggagatgcagagtggtaa
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