Chiloscyllium plagiosum (whitespotted bambooshark): 122553394
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Entry
122553394 CDS
T08871
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2-like
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
122553394
Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
122553394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
FXa_inhibition
hEGF
Plasmod_Pvs28
EGF_MSP1_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
122553394
NCBI-ProteinID:
XP_043553038
LinkDB
All DBs
Position
10:complement(14165104..14531431)
Genome browser
AA seq
1652 aa
AA seq
DB search
MFSSRSFSSRSSALRSNVFQRTDSSTKNTTRSKNEPPAGHRASLIGQSSVSTLSRYGQPV
NTQQVPGTLRTVKHLSNGNGQLLSNALFNGNGQARVQNRFTTNGQTLVENEHPLLRGANL
TTNIGTIKIVFTPTICKRQCINGKCYNNCKKGDPTTLYSENGYGPVSKSGFRIYFCQIPC
LNGGYCIGRDKCRCPSNSTGKFCHLPVPPEKQTVSKTVPARSSASQSVYTLPLSNQQVVM
LPSLVNIHVNHPPEATVQIHQVARVKTVPDTPIKNSIKLSQEQQPTHSVQQRSQLNANGN
VNGQPKPQSQPQSQPQSQPQPPTRTLNVGRCFQETADGQCGKPLPGLTKQDDCCGSVGIS
WGYHKCTKCPPKPEYPKIQNGQVECPLGYKKMNQTSCQDINECLMSGMCQNANCLNTRGS
YRCTCKPGYMMDTSRSHCISDKAVSVEKGTCFRSLSRRNCSLPLSQQITKQICCCSRVGK
GWGKNCEKCPLPGSAVFDEICPAGHGYHYSRSHVQISVRPAEEHELAQITSEQYLDSQQS
TIKDSDLTSKEKDEFIRLEGYDTTIKTPQPFAPAHIPRIDAYPVEVLVKTSPPTLVQIVP
EPTPRQVASVFATEISVVNICDISPNICGPGICISQQVGYLCNCDPGYQLNDQKTKCVDI
DECWQIPQFCSYGRCENTVGSYRCVCSIGFVLNQQGIDCIDINECEGDPCEGKGHCTNTA
GTYSCSCYSGYTLAILEDKQTCQDINECAQAHLCHRGRCINTPGSYHCDCEEGYIMAPSG
QCNDINECSSPNTCPTGECINTLGSFECVSCSVGYKAMNGRCVDENECLTFGICANGNCI
NVDGSYRCSCNQGFELGDNLKSCRDIDECMTLDVCFNGLCTNTEGSYECSSCSLGYKLSE
DRHRCEDMNECLSKDVCGPNGECVNSEGSYFCICARGFTTTPDGTGCQDINECLARDICG
PNGECINNEGGSYHCLCAQGYTTTTDGTGCEDVDECSDETKCSGGQCINTDGSYMCRCDA
GFTHLPEAEQCIDIDECSLYGSSVCGVWKCENTVGSYQCIVRCQPGFQRTAIGECIDIDE
CMNGTICGTHGYCENTDGSFRCHCDQGFEIPPGGQGCVDVNECEMMNGVCGTALCENYEG
SFFCVCMDENEDFDPARGQCHPRVTMEQTPVSMMPAPAKGDLKACYYNLNDENFCDNLLS
RNITKEECCCTVGLGWGDNCEVHPCPMINTDEYNEICPDGKGFIPFQIGSFSFGSQSYGD
ADECTMFGSEICKNGHCVNNIGDYACYCDTGYYYNNVRLECVDIDECQDENTCVNGECVN
TPGSFNCFCSPPLTLDVTRKKCINGTELGVNSEEVDTYLDICWQAVTEDDICSKPLRTRS
TTYTECCCLYGEAWGLQCAFCPSRTSVDFAQLCNIPRIFGDASTGLRDRPGYEYGPEIPP
FGQDFQPGIGSYDNYVQPEYRPYDSQQGLEYGLGDPYLRQRDPQPDSRYELRDPYPAHQY
GPVEPQYGEAYGLRNSQPGSEYSSTGYLRIPQYRPREPGRIPLFSSSENDRSSSFEGLQA
EECGILNGCENGRCVRVQEGYTCDCFDGFELDMTKMTCVDINECEDLSDSIPLCRNASCE
NTEGSYKCICLPGFVLSQYPNDCIPEIETEHQ
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgtcaagatccttctcatctcggtcgtctgctttgcgctcaaacgtattccag
aggactgacagcagcacaaaaaacacgacaaggagtaaaaatgagcccccagcaggacat
agagcttcactaataggccaaagctctgtcagtacattgagtagatatggacagcctgtt
aatactcagcaagtgcctggaacattacgtactgtgaaacatctatcgaatggaaatgga
cagctactctcaaatgcgttatttaatggcaatgggcaggcacgggtccagaatcgtttc
acaacaaatgggcaaacattagtcgaaaatgagcatccgttgttacgaggggcaaacctg
accaccaatataggaacaataaaaatagtcttcacgccaactatttgcaaacgccagtgt
ataaatggaaagtgttacaacaattgtaaaaaaggcgacccaaccaccctttacagcgaa
aatggttacggccctgtgtccaaatcaggttttcgaatctatttctgccagatcccctgc
ctgaatggaggatactgcattggaagagacaagtgcaggtgcccatcaaactcaacaggg
aagttctgccaccttccagttcctcctgaaaagcaaactgtgtcaaagacagtacctgcc
cgttcatcagcttcgcagtctgtgtatactctgcctctttcgaaccaacaagttgtaatg
cttccgtccttggttaatatccacgtaaaccacccaccagaggccactgtgcagattcat
caagtggcaagagttaaaaccgtacctgacactccaatcaagaacagcataaaactgtca
caggagcaacagccaacccattcagttcaacaaaggtcacagcttaatgctaatggaaat
gtaaacggccagcccaaacctcagtcacaacctcagtcacaaccacagtcacaaccacaa
ccaccaaccagaactctgaatgtgggaagatgctttcaggaaacagctgatggtcagtgt
ggaaaaccccttccaggtctcacaaaacaggatgattgttgtgggagcgtaggaatatca
tgggggtaccataaatgtacaaaatgtcctccaaaaccagaatatcccaagatacagaat
ggccaggttgaatgtcctctgggctataaaaaaatgaaccagacaagttgtcaagatatc
aacgaatgcctgatgtcaggaatgtgtcaaaatgctaactgtttgaacaccagaggtagc
tacagatgtacgtgtaaacctgggtatatgatggatacatcaaggagccactgcatctcg
gacaaagctgtttcggtagaaaaaggcacttgttttagatcgctgtccagaaggaactgc
tcgctgcctctttctcagcagatcacgaaacagatctgctgctgtagccgagtgggcaaa
ggatggggtaaaaactgtgaaaagtgcccgctgcctggctcagctgtctttgatgaaatc
tgtccagcgggtcatgggtatcattactctcggtctcacgtccagatttcagtgagacct
gctgaagaacatgaattagctcagattacctctgaacaatatcttgacagtcagcagagc
accatcaaggattccgatttaacttcaaaggaaaaggatgaatttattaggttagaagga
tacgatacgacaataaaaactcctcaaccctttgcacctgctcatattccaagaattgat
gcctatccagtggaagtactagtgaagacaagtccacctactctggtgcaaattgttcct
gaacctaccccgagacaggtggcttcagtatttgcaacagaaatttcagttgtaaatata
tgtgacatttcgccaaacatctgtggtccaggaatttgcatcagtcagcaagtggggtat
ttgtgtaactgtgacccaggttatcagctaaatgatcagaaaacaaagtgcgtcgatatt
gatgaatgctggcaaatcccacagttttgtagctatggacgatgtgaaaatacagtggga
agctatcgatgtgtttgttcaattggttttgtgctgaaccaacaaggcatcgactgcata
gatataaatgagtgtgaaggagacccatgtgaaggaaaaggccattgtaccaatacagcg
ggcacatactcctgttcctgctattctggctatacattagctatcttagaagacaaacag
acctgccaagatataaatgaatgtgctcaggctcatttgtgccatagaggacgttgtatc
aacaccccaggttcttatcactgtgactgtgaagagggttacatcatggctccatcagga
cagtgtaacgatattaatgaatgcagtagtcccaatacatgtcctactggagagtgtatc
aatactctgggttcctttgaatgtgtcagctgttcagttggatacaaagcaatgaatgga
cgatgtgtagatgagaacgaatgcttgacatttggcatttgtgccaatggaaattgtata
aatgtggatggatcctaccgatgcagttgtaaccaagggtttgaactcggggataacctg
aagagttgcagagatatcgatgaatgtatgactcttgatgtttgtttcaatggactttgt
acaaacactgagggatcttatgaatgttcatcctgcagtcttggctacaaactatcagaa
gacagacacagatgtgaagacatgaatgaatgcttgagcaaggatgtctgtggtccaaac
ggagaatgtgttaacagtgaaggatcctatttctgcatttgtgccaggggtttcaccact
actcctgatggtacaggctgccaagatattaatgaatgcttggccagagacatctgtggt
ccaaatggagaatgcataaacaatgaaggaggatcttatcactgtctctgtgctcagggc
tacaccactactactgatggaacaggctgtgaagatgtggatgaatgcagtgacgaaact
aaatgttcagggggacaatgcataaataccgatggatcatatatgtgtagatgtgatgca
ggtttcacacatttacctgaagcagaacaatgtatagatatcgatgaatgcagtttatat
ggcagctcagtctgtggagtctggaaatgtgagaatacggttgggtcctaccagtgcatc
gtaagatgccaacctggtttccaacgtacagcgatcggagaatgcattgatattgatgag
tgtatgaatggaacgatctgtggtactcatggatattgcgaaaatacagatggatccttt
cgttgccattgtgaccaaggttttgagattccaccagggggccaaggatgtgtagatgtc
aatgaatgtgagatgatgaatggagtctgtggaacagccctctgtgaaaattatgaagga
tccttcttctgtgtgtgcatggatgagaatgaagactttgacccagcaagaggacagtgc
caccctcgggtaacaatggaacagacaccagtgtccatgatgccagctcctgcaaagggg
gatttgaaggcatgctactacaatctgaatgatgagaacttctgcgataatttgctgtcc
cgaaacatcacaaaggaagaatgctgctgtactgttggactcggttggggtgataactgt
gaagttcacccttgtcccatgatcaacacagatgaatacaatgaaatttgtccagatgga
aaaggctttattccatttcagatcggttcttttagctttggatcacaaagctatggagat
gcggatgaatgtacaatgtttggatcagaaatttgcaagaatgggcattgtgtaaataat
ataggtgactacgcctgttactgtgacactggatattactataacaatgtacgactggaa
tgtgttgatattgatgagtgtcaagatgaaaatacatgtgtgaatggagagtgtgtcaat
acaccaggatcttttaactgtttctgcagcccaccacttacactggatgtaacccgtaaa
aaatgtataaatggcacagaattaggagttaactctgaagaggtagatacatatctggat
atatgctggcaagcagtgactgaggatgacatctgtagtaagcctttgaggaccagatca
acaacatacactgaatgctgctgcttgtatggagaggcctggggcctacaatgtgctttc
tgcccctccagaacatcagttgattttgcacagctttgtaatattcctaggatatttggc
gatgcatcaactgggctccgggatagacctggttatgaatatggcccagaaataccaccc
tttggtcaggatttccaacctggaattggatcatatgataattacgttcagcctgaatat
agaccatatgattcccaacaggggctagaatatggattgggagatccctatctgagacag
agagatccgcaacccgactcgaggtatgaactgagagatccttatccagctcatcaatat
ggcccagtagaacctcaatatggtgaagcatatggactaagaaattcacaacctggatct
gagtatagttctacgggatatttacggattccacagtaccgtcctcgggagcctggaaga
atcccattgtttagtagcagtgagaatgatcgttccagtagttttgaaggcttacaagca
gaggagtgtgggattctgaatggctgtgaaaatgggcgatgtgttcgagtgcaggaagga
tacacctgtgattgttttgatggttttgagctcgacatgacaaaaatgacttgtgtagat
attaatgaatgtgaggatctgagtgatagcataccactctgccggaatgcaagctgtgag
aacacagaaggatcatataagtgcatctgtttaccaggctttgtgctttcccagtatcct
aatgactgtataccagaaatagaaacagaacatcagtaa
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