Chiloscyllium plagiosum (whitespotted bambooshark): 122553477
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Entry
122553477 CDS
T08871
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122553477 (rtn1a)
03036 Chromosome and associated proteins [BR:
cpla03036
]
122553477 (rtn1a)
Membrane trafficking [BR:
cpla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
122553477 (rtn1a)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122553477 (rtn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Reticulon
Motif
Other DBs
NCBI-GeneID:
122553477
NCBI-ProteinID:
XP_043553201
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All DBs
Position
10:29828069..30062110
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AA seq
771 aa
AA seq
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MASNPFVQPFAKGQWGEGEEFEQTDRGVGVSPQAGAAFGGGDAVAAAESWRAGLEQPLIP
DSRGQPVTKATASAVGHSPLIQNLSTKEVTEGSLVSSTGLEEYSPEIGTTRQVLSFESHG
MTSSDFGIEMVPGDSIDLAKALVDPVGAEKTEFQNYIDMCHSEESKVQELSKMHWEEKMS
FLDDTSADIEAFPEAPKKSVEEIKLIEEMSPCLSPEESTTAPYVEEPSDEDISEKWEMED
TQHNVHTVDTCASPAHVLLTELETIVDPNSRCKSQREQDMKPKQGSDVVPTVTVSEPDDD
SPISQTPTPSSSEESDSQIEAAYHFLEEEHPVASKTSEQTQCFSLNTTEEETSPSAALTK
LDESAQNLSNLPAMTLDLEASSAESGDSEIEVVPDESLSVEEAEDCSYMAFRQAGGTPPS
SVSSVQYSILREEREAELDSELIIDPYDVSSASEESLQREQGSPMKSNSMGKESAEKALI
MDNQQESDHQSSQLAEYAATSILKGSNGTEVATIEPLIPLDYTEAFITPEVVVEEPSSEE
VSEETAGKISDSKSSDRAKTGKDFDNSQPITSEQFLLVLNKKSVIDLLYWRDIKQTGIVF
GSVLLLLFSLTQFSVVSVIAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKAYLDMDA
TLSEEQIQKYADSALVYVNSTVKELRRLFLVQDLVDSLKFAVLMWLLTYVGAIFNGLTLM
IMAVVSMFTLPVVYEKYQAQIDQYLGLVRTHVNSVVAKIQAKIPGAKRKTE
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaatcctttcgttcagccgtttgcaaagggacagtggggcgagggcgaggag
tttgagcagacagatcgtggtgtaggtgtcagtccgcaggcgggggcggcttttggtgga
ggggatgcagttgcagcagccgagagctggcgagctgggttggagcagcccctcatacca
gactccaggggacagcctgttaccaaggcaactgcatccgcagttggacattctcccttg
attcagaatctaagtacaaaagaagttacagaaggatcacttgttagctcaacaggtttg
gaagagtatagtccagagattggcacaacaagacaagttctaagctttgagtctcacggt
atgaccagctcagatttcggaatagagatggtaccaggggattctattgacttggccaaa
gctttggtggaccctgttggggcagagaagacagaattccaaaactacattgatatgtgt
cattcagaagaatcgaaagttcaggagttatccaagatgcactgggaagagaaaatgtct
ttcctagatgacacatcagctgacatagaagccttcccagaagctccgaaaaagtcagtt
gaggagataaaattgatagaagaaatgagcccttgtctgagtcctgaggaatcaacgact
gcaccatatgtggaagagccttcagatgaagacatttcagagaaatgggaaatggaggac
acccagcacaacgttcacacagtggatacatgtgcatcaccagcccatgttttgcttact
gagctagaaaccatagtagatcccaatagcaggtgcaagtctcagcgtgaacaagacatg
aaaccaaaacaaggatccgatgtagtgccaactgtgactgtatcagagccagatgatgac
agcccaatctcccaaacgcctactccctcaagctcagaagagtctgattcacagattgaa
gctgcttaccattttctggaggaggaacaccctgttgccagcaagacatcagagcaaact
cagtgtttttctttaaataccacagaagaagagacctccccaagtgctgccttaacaaaa
ttagatgagtctgcacagaatttgtcaaatctaccagcaatgacattagatctagaggcc
agcagtgctgaatctggagattctgagatagaggtagtaccagatgaatcactgtctgtg
gaagaagcagaagattgcagctatatggcattcagacaggctggtgggactccaccttct
tccgtttcttcggtccagtatagcatcttgagggaggaacgtgaagctgagcttgacagt
gagctcatcattgatccatatgatgtttcatcagcatctgaagagagtctccaaagagaa
caaggctcccctatgaaatctaatagcatggggaaagagtctgctgaaaaagccttgata
atggacaaccagcaagaatcagatcatcagtcaagtcaattagctgagtatgctgcaact
tctattctcaaaggttctaatggaactgaggtagccactattgagccccttatccccctc
gattatacagaagctttcattacacctgaagtagtagttgaagaaccatcttctgaagaa
gtctctgaagaaacagctggaaaaataagtgatagcaaatcctcagacagagccaagact
ggaaaagatttcgacaacagccagcctattacttctgagcagtttctactggtactcaat
aagaaatcagttattgacctgctgtactggcgtgacatcaagcagacaggaattgtcttt
ggaagtgtgcttcttctgttgttttcactcacccagttcagcgttgtgagtgtcatagct
tacctggcacttgctgcactctctgctacaatcagcttcagaatttataaatcagtgtta
caggctgtgcagaagactgatgaaggacatccttttaaagcttatttggatatggatgcc
accctctctgaagagcagattcagaagtatgctgattctgcactggtgtacgtaaacagt
actgtcaaagagctgcgacgactgtttcttgtgcaagaccttgtggattctctgaaattt
gcagtactgatgtggctgttgacctatgttggagctatcttcaatggcttgaccttgatg
attatggctgtcgtttctatgtttaccttgcctgttgtatatgagaaataccaggcacaa
atcgaccagtatttgggactggtgaggacccatgtcaattctgtggtggcaaagattcaa
gccaaaataccaggagcaaaacgaaagactgagtaa
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