Chiloscyllium plagiosum (whitespotted bambooshark): 122553640
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Entry
122553640 CDS
T08871
Symbol
arid4a
Name
(RefSeq) AT-rich interactive domain-containing protein 4A isoform X1
KO
K19194
AT-rich interactive domain-containing protein 4A
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122553640 (arid4a)
03036 Chromosome and associated proteins [BR:
cpla03036
]
122553640 (arid4a)
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Helix-turn-helix
ARID
122553640 (arid4a)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
122553640 (arid4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
MSL3_chromo-like
Tudor_2
PWWP
KIF2A-like_1st
Motif
Other DBs
NCBI-GeneID:
122553640
NCBI-ProteinID:
XP_043553688
LinkDB
All DBs
Position
10:50252621..50409004
Genome browser
AA seq
1328 aa
AA seq
DB search
MKIFQQPLEQVDAVVTTKTSRWHCYQISQAADEPAYLTVGTDVSAKYRGAFCEAKIKTVK
RLVKVKVIFKHDSSTHVVQDDQVKGPLRIGASVEVKGSDGSYQEAAINKLTDASWYTVVF
DDGDERTLRRTSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKTNRGRRLSSAPTPE
DEREEEPSEDEDDDKRRLNDELLGKVVYVDCNADKRKGWYPALVLSPSCSDEITVKKDQC
LVRSFADSKFYPIARKDIRELDWDKVTKQDPVVKQALEEAHQFYQQRIVPESWKVDMNVI
LESSSSDEEEEEEEAENDEEDEETKQESEEELDPEERDNFLQQLYKFMEDRGTPINKPPV
LGYKDLNLFKLFRLVYRHGGCDNIDSGSVWKQIYMDLGIPILNSAASYNVKTAYKKYLYG
FEEYCRAADLRFRTIHHIEAIGKPVEIDEKNGTCDPKQASTTLDDEKSDDSENEKEEKEV
RSPRGRRRNTTPVRKEVKETKKEKMNEEANNENKEVKEDSKKQGKEADTGQLKNVSAPKN
RAEKIKKEESEKDSEEEDEGDEDAEEDHEDIQKKMLPLKREENENKEEEEEDEEEEEEEG
GDDEFERFPSGTKVKVKYGRGKNQKIYEANIRDSEVDDGEVVYLVHYYGWNTRYDEWVKG
DRILWPSERGVPKGKHRRKFKNKQDHEKKDDDKQSKSKRGRPSLKSPPTTNSQRSLSRTP
GSEGKSGTRNMRNNTSDSSPLLNGVEGLPRRRTRRSSGMYDSDKVSNGSTSSSDESEVET
AADKSVKEEVVSTKKLDDEEKPEGRKLKDSCLHELRVLPCEDGLKTTPVKQEVESLEQTD
NGKMMTQTEDIWKEIIDKSPKGKGRRNRTRDACSDNAKSVLANHVVAEGGEDVEKLENSE
IKQLSGPHVPEDAIPVIDTSLLNELTNDEKKLGKRKSPDKLTPDKRLRIENEDKLRTAKD
EGIEKIEFFADECEESKTIERLELENGEASSFEIATDRCVKQELEAPCLEIEEDISLKTD
EDMMPPIGPEALVCHEVDLDDFDEKEKSSNEALCAGTFASNSPESVIAVVSVVQQVLPVA
SPALPHQDEVRSVKSESDITIEVDSVAGESQEGLCESESANGFDASTSSSSSIVVQEAET
KEKGQKRISDSSNGTPAKKQKRSHKRSNVSNKTEKNGTGNSSDSEDLAVTENSNKCTPVK
SSNKSQKLGRSPSRTSPNGKDGDKDKEKDATDGASPRTYKWSFQLTDLNNLTSAERISFL
QDKLQEIRKYYMSLKSEVASIDRRRKRLKKKEREVISAAPGISSASSETGMSPTSSSPAQ
NSVAVECR
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgaagatatttcagcaaccactggagcaagtagacgctgttgtaactaccaagacttca
agatggcattgctaccaaatttcacaggcagctgatgagcctgcctatctcacagtggga
acggatgttagtgccaagtaccgtggtgccttctgcgaggcaaaaattaagaccgtgaag
cgattggtaaaggtcaaggtgatctttaagcatgacagttctacacatgttgtccaggat
gaccaagtaaaaggcccattaaggattggcgcatcagtggaagtgaaagggtctgatggt
tcttaccaagaagctgccattaataaactgacagatgccagctggtatactgtggtgttt
gatgatggagatgagaggacccttaggcgtacatctttatgtctgaagggggagagacac
tttgcagagagtgagacccttgatcagttgccattaacaaacccagagcactttggcaca
ccagtcattgggaagaaaacaaacagaggaaggagattatcctctgctcctacacctgag
gatgaaagagaagaggaaccaagtgaagatgaggatgatgacaaacgacgtcttaatgat
gaacttctgggcaaagtagtctatgtagattgtaatgcagacaagagaaaaggctggtat
ccagctttggtgctgtctccaagttgcagtgatgaaatcactgtgaagaaagaccagtgt
ttggtgagatcctttgccgactccaaattctatcctatcgcaagaaaagatatcagagag
ctcgattgggacaaagttacaaaacaagacccagttgttaaacaagcacttgaagaagct
caccaattctatcaacaaaggattgttcctgaaagctggaaggttgatatgaatgtcatc
ttagaatcctccagtagtgatgaagaggaggaggaagaagaggcagaaaatgatgaggaa
gatgaagaaacaaagcaagagtcagaagaagagcttgatccagaagagagggataacttc
ttgcagcagctttacaagtttatggaggacaggggcacacctatcaataaaccacctgta
ctgggctacaaggatctgaatttgttcaaacttttcagactggtgtatcggcatggtggc
tgtgacaatattgacagtggttctgtgtggaaacaaatatacatggaccttggcattcca
attctgaactctgctgcctcttacaatgtaaaaactgcttataagaagtatttgtatggg
tttgaggaatactgccgtgcagctgaccttcgcttcaggactattcatcatatagaagct
attggaaaaccagtggagatagatgaaaagaatgggacatgtgatccaaagcaggcatct
actacattagatgatgaaaaaagcgatgactctgaaaatgagaaagaggaaaaagaagta
cgatctccaagaggtcggaggagaaatacaacacctgtcagaaaagaagtcaaagaaaca
aaaaaagaaaagatgaatgaagaagctaataatgaaaacaaagaggttaaagaggattcc
aagaaacagggaaaggaagcagatacaggacagttgaaaaatgtgtccgcacccaaaaac
agagcagaaaagatcaagaaagaagagtctgaaaaagattctgaggaagaggatgaaggt
gatgaagacgcagaagaggaccacgaggatatacaaaagaagatgttaccattaaaaagg
gaagagaatgaaaataaagaggaggaagaagaagatgaggaggaggaggaggaggaaggt
ggtgatgatgaatttgaaagatttccttctggaaccaaggttaaagtaaaatacggacgt
ggaaagaatcagaaaatctatgaagccaatattagagactctgaagttgatgatggagag
gttgtctatttagtacattactacggttggaatacaaggtatgatgaatgggtaaaaggt
gatagaattctctggccttcagaaagaggtgtaccaaagggaaaacatcgaagaaaattc
aagaataaacaagatcatgaaaagaaagatgatgacaaacaaagtaaatcaaaacgtggg
cgccctagtctgaaatctccaccaactaccaattctcagcgtagtttatccagaactcca
ggtagtgaggggaaaagtggaacaagaaatatgcggaataatacatctgattcttcacct
cttctcaatggagtggaaggtcttcctcgaaggcgcaccaggcgtagttctgggatgtat
gattctgacaaagtatcaaatgggtctaccagttcttcagatgaaagtgaagtagaaact
gcagcagacaaatctgtgaaggaggaagttgtttctacaaagaaattagatgacgaagaa
aaacctgaggggagaaaacttaaggattcttgcctgcacgaactgagggtactgccatgc
gaggatggtttaaaaactacaccagtaaagcaggaagtagaaagcctagaacaaactgat
aatgggaaaatgatgacacagactgaagatatatggaaagaaatcattgacaagtcacca
aaggggaaaggaaggaggaatagaacacgagatgcatgttcagacaatgccaagtctgtt
cttgctaatcacgtagttgctgaaggtggagaagacgtggaaaaactagaaaactcagag
attaagcagctttctggcccccatgtgcctgaagacgccattccagtcatagatactagc
ttattaaatgaacttacaaatgatgagaagaagctaggaaaaagaaaatccccagataag
ttaacacctgataaaaggctgcggatagaaaatgaagacaaactacgaactgcaaaagat
gaaggtattgagaaaatagaattctttgcagatgagtgtgaagaatctaaaactattgaa
agactagaacttgaaaatggtgaagcttcttctttcgagattgcaacagaccggtgtgtg
aaacaggaattggaagctccctgtttagaaattgaagaggatatttcattgaaaactgat
gaagatatgatgcctccaattggaccagaagctttagtttgccatgaagtagatttagat
gactttgatgaaaaagaaaaaagtagcaatgaagctttatgtgctggaacgtttgcatcc
aattcccctgaatcagttatagctgttgtatctgtcgtgcagcaggttttgcctgttgct
tccccagcactgcctcatcaggatgaggttcgtagtgtaaaaagtgaaagcgacattacc
attgaagtggacagcgttgctggagaatcacaggaaggattgtgtgagagtgagtctgcc
aatgggttcgatgccagtactagctcaagcagcagcattgtagtgcaagaagctgagacc
aaggaaaaaggccagaaaagaataagcgacagcagcaatgggacaccagcgaagaaacaa
aaacgtagccacaagcgatcaaatgtgtccaataagactgaaaaaaacggaactggcaat
agcagtgacagtgaggatcttgcagtcacagaaaactccaataaatgcactccagtgaag
agctcaaataagtctcaaaaacttggcaggtctccttcaagaacttctccaaatggtaaa
gatggggataaggataaagagaaagatgcaactgatggtgcatcacctcggacgtataaa
tggagttttcaactcactgaccttaacaacctgaccagtgctgaacgaatatctttccta
caagacaaattacaggagatcagaaaatactacatgtctttgaaatctgaagtagcatcc
atagacaggaggagaaaaaggttaaaaaagaaagagagagaagttatatctgcagctcca
ggcatttcctctgcttcttcagaaaccggaatgagtccaacgtcgtcttcaccagcccag
aatagtgtggcagtagagtgcaggtga
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