Chiloscyllium plagiosum (whitespotted bambooshark): 122554025
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Entry
122554025 CDS
T08871
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04140
Autophagy - animal
cpla04148
Efferocytosis
cpla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122554025 (vps18)
04148 Efferocytosis
122554025 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122554025 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122554025 (vps18)
Membrane trafficking [BR:
cpla04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122554025 (vps18)
Hops complex
122554025 (vps18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_16
zf-RING_5
zf-C3HC4_2
zf_RING_Vps8
zf-RING_Vps41
zf-ANAPC11
zf-RING_11
zf-RING_2
zf-RING_UBOX
zf-rbx1
DUF5600
DUF1664
DUF2229
zf_RING_Vps8_fungal
DUF4446
Motif
Other DBs
NCBI-GeneID:
122554025
NCBI-ProteinID:
XP_043554447
LinkDB
All DBs
Position
10:complement(88296648..88305855)
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AA seq
929 aa
AA seq
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MENLQVLDSLGLCAPLYTEIIADNLLFLFLFFFSPFLGRIDLGKPDQPNQIELGRKDDAR
THKLFLDPSGSHLLISLTSSECLYVNRNSQKMRSLSRWKGHLIESVGWNKHMGSESNTGP
ILVGTSQGQMYEAEIVVSEDRLFNSSPDQYFKYVYSLEEDGSPAPVCCLEIERSIDARFF
VIATTRKRLYQFVGKAPEASEQQVFQPIFNQYADSLPSFQEFPVSLGYSEISFYTSKLRS
SPRSFAWMMGNGVLYGTLDYSRPDSLLSDLKVWEYSADTEPPRSIVLTQFHFLLLLSDRV
KAICTLNGQLVFEDVFPDKFGRLLRMVKDSVAGLIWIYTEKAVFRYHVQKESRDVWQMYM
NMGKFDLAKEYCKDRPECLDAVLAKEADHCFQNKKYVESAKYYALTQRYFEEIALKFIEA
KQEEALKEFLLKKLKNLKLEDKTQMTLLVSWLTEIYLNWLGMFEGDESKQSQFDATREEF
RQFLSSSKIKECLLNNRSTIYDLLASHGNVVDMVFFSVIMQDYERVVAHHCQHDDYSAAL
EVMSKYQDPSLFYKFSPVLMQHIPKLVVDAWITMRRRLVPKSLIPALVNYSQIGSSEQIG
EAIRYLEFCVHDLNVTDQAIHNYLLSLYAKYKPKALLWYLEQAGSDTNHIHYDLKYALRL
CAENGHRQACVHIYKTMELYEEAVDLALQMDVDLAKSCADMPEEDEELRKKLWLKIARHV
VQEEKDVKKAMVCLSSCNLLKIEDILPFFPDFVTIDHFKEAICSSLQEYNKHIDELKQEM
EEATESAKRIREDIQEMRNKYGVVESQEKCASCDFPLLNRPFYLFLCGHMFHSDCLLQEV
IPHLSPFKQTRLEELQKKLVTSNQVKSRQRPKEGGEGSHKGQQSRDQIKADIDDIVAAEC
IYCGELTIKSIDKPFINPQKYEEENNSWL
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctgcaagtcttggactcgctggggttgtgtgctccattgtacactgagatt
attgctgataacttgttgtttctttttctcttttttttttcccccttcttgggtaggatt
gatttaggaaaacctgaccaaccaaaccagattgaactggggcgcaaagacgatgccagg
acccacaaattgtttctggacccctctggatcccatctcctgatcagccttacgtccagc
gagtgtctttacgtgaacaggaattctcagaaaatgagaagcctctcccgctggaagggc
catttaattgagagtgtaggctggaacaagcacatggggagtgagagcaacaccggcccc
attctggttggaaccagccaaggtcagatgtacgaagcggagattgtggtctcagaggat
cggctgtttaactccagtcctgatcagtacttcaagtacgtttacagcctggaagaggac
ggctccccggctcctgtctgctgcctggagattgagcgcagcattgatgcgagattcttc
gtcattgccaccactcgcaagcggttgtaccagtttgtcgggaaggccccagaggccagc
gaacagcaggtattccagcccatcttcaaccagtatgctgactctttgcccagtttccag
gagttcccagtcagcctgggctacagtgagatctctttttacacctccaaactgcgatcc
agtccacgctcctttgcctggatgatgggtaacggcgtcctgtacggcacccttgattac
agcaggcctgactcccttctgagtgacctgaaggtctgggagtactcggcagacaccgag
cctccccgctctattgtcctgacccagtttcacttcctgctgctactctctgacagggtg
aaggccatttgcacgctgaacgggcagctggtcttcgaggacgtgttccctgacaagttt
ggccggctcctgcggatggtcaaggattctgtggctgggttgatctggatctacacggag
aaggctgttttccggtaccacgttcagaaagaatcgcgggatgtctggcagatgtacatg
aacatgggcaagtttgacctggcgaaggaatactgcaaagaccggcctgagtgcctggat
gctgtgcttgccaaggaagctgaccactgctttcagaataagaagtacgtggaaagcgcc
aaatactatgctctgacgcagaggtactttgaggagattgcgctgaagttcatcgaagcc
aaacaagaggaggcactgaaggagtttctgctgaaaaagctgaagaatctgaagctggag
gacaaaacacagatgaccttgttggtgagctggctcactgagatctatctgaactggctg
ggcatgtttgaaggcgatgagagcaagcagagccagtttgatgcgacgagggaggagttc
cgacagtttctgagcagctccaagattaaagagtgcctgctcaacaaccgctcgaccatc
tatgaccttttggctagccatggcaacgtagtggacatggtgttcttctctgtgatcatg
caggattatgaacgggttgtggcccaccattgccagcatgatgactatagtgcagctctg
gaggtcatgtccaagtaccaggacccttctctcttctataagttctcccccgtcctcatg
cagcacattcctaagctggtggtggatgcatggatcaccatgcggaggcggctggttccc
aagagcctcatcccggcgctggtcaactacagccagatcggcagctcggaacagattggt
gaagctatccgctacctggagttctgcgtacacgatctgaatgtcaccgaccaggcaatt
cacaattacctgctgtctctgtacgccaagtacaagcccaaggccctgctgtggtacctg
gaacaagctgggtcggatacaaaccacattcattacgacctgaagtatgcactgcgcctg
tgtgcagagaatggtcaccgccaggcctgtgtgcacatttataagacaatggaattatac
gaagaggcggtagatcttgcactgcagatggatgtagatcttgctaagtcatgtgcagac
atgccggaggaagatgaggagcttcgtaagaagctgtggctgaagattgcccgtcatgta
gtccaagaggagaaggatgtcaagaaggccatggtttgtttatccagctgtaacctgctg
aagattgaagacattctgcccttctttccagattttgtgaccattgaccattttaaggag
gccatctgcagctccctgcaggagtataacaagcacatcgacgagctcaagcaggagatg
gaggaggcgacagagagtgccaaacgaatccgggaagatatccaggagatgagaaacaag
tatggtgtggtggagtctcaggagaaatgcgcctcgtgtgacttcccactgctgaaccgc
ccgttctacctattcctgtgtggccacatgttccattcggactgcctcctacaggaagtg
attcctcacctctcccctttcaagcagaccaggctggaggagctgcagaaaaagctggtg
accagcaaccaagtgaagtcccggcagcggccaaaggaaggaggagagggcagtcacaag
ggacaacagtcccgtgatcagatcaaagctgacattgatgatattgtggcagccgagtgc
atttattgtggagaactgacaattaaatcaatagacaaaccttttatcaacccacagaaa
tatgaagaggagaataacagctggctataa
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