KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122554084
Entry
122554084         CDS       T08871                                 
Symbol
cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04115  p53 signaling pathway
cpla04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122554084 (cop1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    122554084 (cop1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cpla04121]
    122554084 (cop1)
Enzymes [BR:cpla01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122554084 (cop1)
Ubiquitin system [BR:cpla04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122554084 (cop1)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     122554084 (cop1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_EIPR1 WDR55 Beta-prop_RIG_2nd zf-C3HC4_2 EIF3I Beta-prop_TEP1_C Beta-prop_WDR19_1st zf-C3HC4 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 zf-RING_2 zf-RING_UBOX Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR90_POC16_2nd RING_XB3-XBAT31 zf-RING_5 zf-C3HC4_3 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N WD40_like zf-C3HC4_4 Beta-prop_DCAF12 zf-RING_10 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st zf-rbx1 Beta-prop_IFT122_1st WDR90_beta-prop_4th TRAF3_RING zf_C2H2_10 DZR UvrD-helicase zf-RING_4 Prok-RING_4
Other DBs
NCBI-GeneID: 122554084
NCBI-ProteinID: XP_043554472
LinkDB
Position
11:93056308..93155574
AA seq 611 aa
MVFTILLGPICFEMIDEAHMTKCGHSFCYKCIRQSLEVSNRCPKCNYVIDNVDQLYPNFL
VNELILKQKQRSEEKRLKLEHPNGHRWQAIQDVLITDQDSLDLPNVNLMLELIIQKKQQL
EAESQAAQLQILMEFLQEAKRNKKEQLDQLQKELNVLEEDIKRVEGLMFNETAGLYSPVS
ESTHVPNLDSTVPQFEAPSPSNSIIDSTEYSQPPGFSGSSQGKRQTWYNNTLASRRKRLT
AHFEDLEQCYFSTRLSRLSDETRSVNQLEEFQECLSKFTRYSSVRPLATLSYANDLYNGS
SIVSSIEFDRDCDFFAIAGVTKRIKVFEYGTVIQDAVDIHYPINEMTCNSKISCISWSSY
HKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLW
STNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKA
VSYAKFVSGEEIVSASTDSQLKLWSVNRPHCLRSFKGHINEKNFVGLASNGDYIACGSEN
NSLYLYYKGLSKTLLTFKFDTVKSVLDKEKKEDDSNEFVSAVCWRALPDGQESNVLIAAN
SQGTIKVLELV
NT seq 1836 nt   +upstreamnt  +downstreamnt
atggtattcaccatacttcttggtcctatctgctttgagatgattgatgaggcacacatg
acaaaatgtgggcacagtttttgctataaatgtattcgacagagcttggaagtcagcaac
cggtgccccaagtgcaactatgtgattgataatgttgatcaactgtaccctaacttccta
gtgaacgaactaatcctaaaacagaagcagagatctgaagaaaaacgactaaaacttgaa
catccaaatggccaccgatggcaggcaattcaggatgtgctgatcacagatcaggatagt
ctggatctcccgaatgtaaacctcatgctggagctgataatacagaagaagcagcagctg
gaagcggaatcgcaggcagcccagttgcagatcctaatggagtttcttcaggaggcgaaa
agaaacaagaaggagcaactggaccagttacagaaagagctgaatgttcttgaagaagac
attaagcgagtggagggactgatgtttaatgagacggctggtctgtattctcctgtcagt
gaatcgactcatgtgccgaacctggatagcactgtgccacagtttgaagcgccatctcct
tcgaacagcattatagattctacagaatattcccagcctcccggctttagtggaagttcg
cagggaaaaaggcaaacctggtacaacaacacattggcctctcggcgcaagcgattaact
gctcactttgaagatcttgagcagtgctatttctcaaccaggttatctcgcttgtcagat
gaaacaagatcagtaaatcaactggaggaatttcaggagtgcctttccaagtttacacgg
tacagctctgtgaggcctctggccacgctctcatatgccaatgatttgtacaacggctca
agtattgtttccagcattgaatttgacagagattgtgacttctttgctatcgctggtgtg
acaaagcggatcaaagtgtttgagtatggaaccgtgatccaggatgctgtggacattcac
tacccaatcaacgaaatgacttgcaactccaaaatcagctgtatcagctggagcagttac
cacaagaacctgttagcaagcagtgactatgaagggacagtcattctgtgggatggattc
acagggcagagatctaaagtctaccaggaacatgagaaacgatgttggagtgtagatttt
aatctgatggatcccaaactcctggcttcaggttctgatgatgctaaagtgaagttgtgg
tctacaaatcttgacaattctgtggcaagcattgaagcaaaagcaaatgtttgctgtgtt
aagttcagccccagctccaggtaccatctggcctttggctgtgcagatcactgtgttcac
tactatgatctgcggaacactaaacagcctatcatggtgtttaaaggacatcgcaaggca
gtatcctatgccaagtttgtaagtggagaagaaatagtttcagcatctacagacagccag
ttgaagctctggagtgttaacagaccgcactgtttacggtcatttaagggtcacatcaac
gaaaagaactttgtgggtttggcatccaatggggattacattgcctgtggaagtgaaaac
aattctctctacctctactataaggggctctcaaaaacactgctcaccttcaagtttgac
acagttaaaagtgtcttggacaaggagaaaaaggaggatgacagcaatgaatttgtcagt
gcggtgtgctggagagctttaccggatgggcaggaatcgaatgtcctaatagcagcgaac
agccaaggcacaataaaggtcctggaactcgtctga

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