Chiloscyllium plagiosum (whitespotted bambooshark): 122554192
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Entry
122554192 CDS
T08871
Symbol
abca4b
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122554192 (abca4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpla02000
]
122554192 (abca4b)
Transporters [BR:
cpla02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
122554192 (abca4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
SRP54
AAA_15
Motif
Other DBs
NCBI-GeneID:
122554192
NCBI-ProteinID:
XP_043554775
LinkDB
All DBs
Position
11:complement(19715101..19865864)
Genome browser
AA seq
2317 aa
AA seq
DB search
MSSSNQISLLLWKNWTLRKRQKLRFLVELVWPLSLFFVLVWLRKSNPLYQQHECHFPNKA
MPSAGMLPWLQGIFCNLNNPCFRYPTHGESPGVVSNYNNSILARVYADVQELLFDKPEIY
KLRKIWDDVCFLSDFMDVLRTNPRKVAGRGIRIRDILKDDEVLTSFLLKEIELSDSVVYQ
LINAQVRPEQFAYGVPDIALKDIACSQVLLDRFLIFMNHRGLRTVLNGICVLSHQRLQRM
EDALYANVDFFKLFQMLPRVLNHYSEGIDLHFWVRIMNDASPILEEFITKDSFQELLQVI
YPFFTEDGPATFSQLMELLSNLICGYPENGGSRVFSFNWYEDNNYKAFLGINNTKKESKY
AYDYTTTPFCNALNQNMESNPATKIVWNVVKPLLMGKILFAPDSPATQQLIKNANVTFEE
LHRLKRIGKIWDEVKPQLWNFFQNSVQMNIIRDSIKNPTVSYFINRQLEDIDLTAKDILN
FLYDRQSIEHAEEIPNFNWQNIFNITDQLLSIFNNYMECLNLDKFEGLSDEGQLTHRALY
LLEENKFWAGIVFVDLHPWSNKLPTHVKYKIRMDIDAVERTNKIKDRYWDPGPRADPVED
MRYIWGGFAYLQDMIEHGIIRTHTNVEVPPGVYVQQMPYPCFVDDIFMLALTRCFPMFMV
LSWIYSVSMIVKSIVLEKELRLKETLKIMGVSNWVHWVTWFIDSFTMMAASTVLATIVIM
RGNVLHYSNSFLLFVFLLVFTVATIMQCFLMSVFFSKANLAAACSGIIYFTLYLPHILCY
AWQDRMTKNMKLAASLLSPVAFGFGTEYLSRYEEQGRGLQWDNIRASPVEGDGYNLLLSI
QMMLLDAFLYGILAWYLDAVFPGQYGIASPWYFPLQSSYWFGAEKSQPTTDVTAAMAGNP
FYEKEPSNLTLGVSIQNLVKVFTEGQKPAVDGLNINFFEGQITSFLGHNGAGKTTTMSML
IGLFPPTSGTAVINGKDIRTDIDAIRQEIGMCPQYNILFNNLTVAEHILFYTQLKGQTAE
EAEKQTEVMLDEVGLPHKKDELAQNLSGGMQRKLSVALAFIGAAKVIVLDEPTSGVDPYS
RRSIWDLLLKYRAGRTIILSTHHMDEADLLGDRIAIISQGKLQCCGSSLFLKNCFGSGFY
LTLVRRMKKAKQRKQNAMPTCTCGTGCSCSCSNCCPIDETLPEEELDGDVDALTNLIKHH
VPDAKLLENVGQELYYLLPNKDFKHRAYASLFREIEETLQDLGLSSFGVSDTSLEEIFLK
ATEDPVPGAGCLLLRKSEAGLKEEHKATVVNIDANNASKEASQNGQAAEKGQSAERKASA
SEVKPNGEAVTAGTDPATAESPGPITDNPQPGGHDGKGSRQIQGSDLVKQQFKALFIKRF
NHAIRSQKDFLAQFLLPANFVLLALIFSLIIPPFGEYQSLTIHPWMYGKQYTFFSNERPW
NKKMGQLMEVLVNKPGFGTRCMRENPIVGHPCSNQSSDWKIPKSDPTIVNLLQSPFYSGS
NPSPSCQCSTGNRLIMLPDCPAAAGGLPPAERVQHTTDILQNLTQRNISDFLVKTYPKLI
KNSMKSKYWVNEQRYGGISIGGKLPVLHIDHKQIDVFFTKLGRMFNVTGGNNTKMTFRSL
NVFLKHLETEDNVKVWFNNKGWHAIVAFMNVANNAILRANLPELHYAEDYGITVINHPLN
LTKEQLSEVTVLTTSVDAVISISVVFAMSFVPASFVLYLIQERVSNAKHLQFVSGMSPTT
YWVSNFLWDMCNYSVTTVMVILIFIGFNKKAYTSPQNLPAFVALLLFYGWAVTPMMYPAS
FVFSVPSTAYVALSCINLFIGINGSAATFILELFENNRALQLFNKMLKNILIIFPHFCLG
RGLVDMAMNQAVTDVYARFGEDFYFSPFHWEFVGKNLVAMAVEGVVYFLLNLIIQHRFFL
NHLPTILSNLPAIEEDDDVAKERERIQGTGKHDILKLKELTKYYSGRNRPAVDRISVGVR
PGECFGLLGVNGAGKTTTFKMLTGDIDPTSGEASVAGYSILTHIDDVHQNMGYCPQFDAI
DDLLTGREHLLLYARLRGVPEDEIEQVANWGIEKLDLAEYANQMAGTYSGGNKRKLSTAI
ALIGCPPVVLLDEPTTGMDPKSRRFLWNCLLSVIREGRAVVLTSHSMEECEALCTRLAIM
VNGQFKCLGTIQHLKYKFGDGYVVTLKIKGTQPGASPDLNPAEEFFKSNFPDSLQIERHH
NMIQYQLSSSSLSKIFQLLISNKEQLKIDEYSVSQTTLDQVFVNFAKQQTAEDDNLALHP
RAAGARREVKVSPAKVEPSQPNTTSTSKTELNNEKKS
NT seq
6954 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctccaatcagatctctctgctgctttggaagaactggacgctcaggaagaga
caaaagctccgttttctagtggaactcgtctggcccctctcactgttctttgttttggtt
tggttacggaaatcaaacccactctaccaacaacatgaatgccattttccaaataaagcg
atgccctctgcaggaatgttgccatggttacagggaattttctgtaatctgaacaacccc
tgcttccgctaccctacacacggagaatctcctggtgtggtttcaaactacaataactcc
atacttgctcgagtgtacgcagatgttcaggagctgctgtttgataagcctgaaatctat
aagctgaggaagatctgggatgatgtgtgttttctgtcagacttcatggatgtactcaga
acgaatcctagaaaggttgcaggaagaggtattcgaatcagggatattctgaaggatgat
gaagtcctgacctcctttttactcaaggaaattgaactctcggactctgtcgtttatcaa
ttgatcaatgcccaagtgcggcctgaacagtttgcttatggagttccagacatagccctc
aaagacatagcatgcagccaagttctgctggatcgtttcctaatcttcatgaatcaccga
ggactgcgcactgtcctgaatggaatttgtgtgctttcccaccaacggctccagagaatg
gaagatgcactttatgcaaacgtggacttctttaaactcttccaaatgcttccaagagta
ctgaaccactactcggaaggaatagatctgcatttttgggtgcgaattatgaatgatgca
tcacccatattagaggagtttatcacaaaggacagctttcaagaattgctccaagtgatt
tacccattctttactgaagatggaccagccacattcagtcagttgatggaactgttgtca
aatttaatttgcggatatcctgaaaatggaggctctcgtgttttctctttcaactggtat
gaagataacaattacaaggcttttcttggaattaacaacacaaagaaagagtcaaaatat
gcttatgattacacaaccactccattctgtaatgcactaaatcaaaacatggagtccaac
cctgcaaccaagatagtgtggaatgtggtgaaaccattactgatgggaaagattctgttt
gccccagattctcctgcaacccaacagctgataaaaaatgctaatgtcacatttgaagag
ctacacagacttaaaaggattggaaagatttgggatgaggtgaagcctcagctgtggaat
ttcttccaaaacagtgtacaaatgaacataatacgtgactcaataaaaaaccccacagta
tcatatttcataaacagacaactggaagacatagacttgacagctaaggacattctaaac
ttcctatacgatagacaatctattgaacatgcagaagagattccaaacttcaactggcaa
aatatttttaatataacagatcaactcttaagcatattcaataattacatggagtgttta
aacctggataaattcgaaggcctttctgacgaagggcagctcacccaccgggcactttac
ttgttggaggaaaacaagttttgggctgggattgtgtttgtggacttacacccctggtcg
aacaagcttccaacgcacgtgaaatataaaatccgaatggacattgatgcagtggaacga
acaaacaaaataaaagacaggtattgggacccaggtccacgagctgacccagtagaggat
atgcgctacatctggggaggttttgcttatttacaagacatgattgaacacggaattatc
aggactcacaccaacgttgaagtgccaccaggggtttatgtccaacagatgccgtatccc
tgctttgttgatgacatcttcatgctagcactaacccgctgcttcccaatgttcatggtg
ctctcctggatctactccgtctccatgattgtgaagagtattgtgctcgagaaggagctc
aggctgaaagaaaccctgaaaatcatgggagtcagtaattgggtgcattgggtcacatgg
ttcatcgacagcttcaccatgatggcagccagtactgtgctggcaaccatagtgataatg
agaggaaatgtgcttcactacagcaactccttccttctttttgtgtttctcctggtgttc
accgtggccactattatgcagtgttttctgatgagcgttttcttctccaaggccaatctg
gcagctgcttgcagtgggatcatttacttcaccctgtacctgcctcacattctctgctat
gcttggcaggaccgtatgaccaaaaacatgaaattggcagcgagcttgttatctccagtg
gcatttggctttggcacagagtacctatcccgttatgaggagcagggtcgaggactgcag
tgggataatatccgtgccagcccagtagaaggagatgggtataatctgctgctatccatc
cagatgatgctgcttgatgcctttttgtatgggattcttgcctggtatcttgatgctgtg
tttccaggccaatacggaatagcatccccatggtattttccactgcagtcctcatattgg
tttggtgctgaaaaatcacaacctaccacagacgtgacagcagcaatggcaggaaacccc
ttttacgagaaggagccatcaaatctgactctgggagtgtcgattcagaacctagtgaag
gtttttacagagggacagaagccagctgtggatggactaaacattaacttctttgaaggg
cagatcacttcctttttaggtcacaatggagctggaaagacaacaacaatgtcaatgctg
attggcttatttccacctacatcagggactgcagtcattaatggcaaagatatccgcaca
gacattgatgcaattcgacaggaaattggcatgtgcccccagtacaatattttatttaac
aacctaacggtggcagagcatatattattctatactcagctgaaaggccagacagcggaa
gaggcagagaagcagacagaagtaatgttggatgaggttggacttcctcacaagaaagat
gagctggctcaaaatttatccggtggaatgcaacgcaagctatcagtagccttagcattc
attggagcagcgaaagtgatcgttctggatgagccaacatctggagtagatccttattcc
agacgatccatctgggatctcttattgaagtatcgtgcaggaagaaccatcattctctcc
actcaccatatggatgaagccgatcttcttggtgaccggatcgcaatcatctctcaggga
aagctgcagtgttgtggatcctctttgttcctgaagaattgttttggttctggtttctat
ctgaccctagttcgcaggatgaagaaggcaaaacaaaggaaacaaaatgctatgccaaca
tgtacctgtggaacaggctgtagctgttcctgctccaactgttgtcctattgatgaaacc
cttccagaagaggaattagacggtgatgtagatgcattgacaaatctcatcaaacatcat
gttcccgacgctaagttgttggaaaatgttggtcaagagctttattacctgctgcccaat
aaagatttcaaacatagggcctacgctagcctcttccgcgaaatcgaggagactcttcag
gatttaggcctcagcagctttggggtgtctgacacttcactggaggagatatttctaaag
gccactgaagatcctgtgcctggagcaggctgtctgttactaagaaagtcagaagcaggc
cttaaagaggaacacaaggcaacagttgtcaacattgatgctaacaatgcatccaaagag
gcttctcagaatggacaggccgcagagaaaggccaaagtgctgaaagaaaagcatctgct
tctgaggtgaaaccaaatggggaagcggtgacagcaggtacagatccagcaactgcagag
tctcctggccccattactgacaacccccaacccggtggacatgatggcaaaggctccagg
cagatccaaggttcagacctggtcaaacaacagttcaaggcattgtttatcaagagattc
aaccatgctattcgcagtcagaaggattttttggctcagtttctccttcctgccaacttt
gtgctgttagctttaatcttctcactcataatcccaccctttggagaatatcaaagttta
acaattcacccatggatgtacggcaaacagtacacttttttcagcaacgaacgtccatgg
aataagaagatgggtcagttgatggaggtgctggtgaataaacctggatttgggactcgg
tgcatgagggagaatcccattgtaggtcatccctgcagtaatcaatcctctgattggaag
attccaaaaagtgaccccacgattgtcaacctactacagtccccattctattccggcagc
aacccttcaccatcctgccagtgcagtacaggaaatcgattgattatgctcccagactgc
cctgcagcagctggtggtcttcctccagcagagagagtccagcatacaactgacatcctg
caaaaccttacccaaagaaatatatcagacttcttggtcaaaacatacccgaaactaata
aaaaacagcatgaagagcaagtactgggttaatgaacaaagatacggtgggatttcaata
gggggaaagcttccagttttacacattgaccataaacagatcgatgtctttttcaccaag
ttgggccgtatgttcaatgtcactgggggtaataatacaaagatgacgtttcgaagtctg
aatgttttcctgaagcatttggagactgaggataatgtcaaggtatggttcaacaacaaa
ggctggcatgccatagtagcatttatgaatgttgccaacaatgcgattctccgagcaaac
ctgcctgagcttcattacgcagaggactatggcataactgttataaaccacccactcaac
ctcacaaaggagcaactttcagaagttactgttctaactacctcagtggatgcagtgatt
tcaatcagtgtggtcttcgccatgtcatttgtcccagccagctttgtgctctacctcatt
caggagagagtttcgaatgctaagcatctgcaatttgtcagtggaatgagccctactact
tactgggtgtctaattttctctgggatatgtgtaactattcagtaaccacggtgatggtg
atcttgattttcattggcttcaataagaaagcttacacttctcctcaaaacctgcctgca
ttcgtagctttgttgctgttctatggatgggcagtgactcccatgatgtacccagcatcc
tttgttttcagtgttcctagcacagcctatgtggctctgtcctgcatcaatctcttcatt
ggtatcaatggcagtgctgccactttcatacttgagttgtttgaaaataatagggcattg
caattgttcaataaaatgttgaaaaatattctgattatatttccacatttctgcctggga
agaggtttggtcgatatggccatgaatcaagcagtgactgatgtgtatgctaggtttggt
gaagatttttattttagtccattccattgggagtttgttggcaagaatcttgttgccatg
gcagttgaaggagtcgtctacttccttttaaatctcattatccaacatcgcttcttcctc
aaccacttgccaacaatcctcagcaatttacctgccattgaagaggatgacgatgtagct
aaggaacgtgaaagaattcagggtacgggcaaacatgacattctgaaattaaaggaactg
actaaatactactcagggagaaacaggccagctgtggatagaatcagtgttggtgtgcga
ccaggagagtgctttgggctgttgggtgtcaatggtgctggaaagacgactaccttcaaa
atgcttacaggtgatatagacccgacctcaggtgaagcttcagtagcaggttacagcatt
ctcacccatattgacgatgtccaccagaacatgggatactgccctcagtttgacgctatc
gatgacttgctcacaggtcgtgaacaccttttattgtacgcaaggctacgcggtgttcca
gaggacgagattgagcaggttgccaactggggaattgaaaagctggatcttgcagagtat
gctaatcagatggctggcacatacagcggagggaacaagcgcaaactctccactgccatc
gccctcatcggctgccctccagttgtcttgctggatgaaccaactacagggatggatcca
aaatctcgccggttcctctggaattgtctcctcagtgttatccgagaaggaagagctgta
gtgttgacctcacacagtatggaagaatgtgaagcactctgcacgagattggccatcatg
gtgaatgggcagttcaagtgcctgggtaccatacagcacctcaagtacaagtttggtgac
ggctatgtagtgactttgaagattaaagggactcagccaggagcttcacctgacctgaat
ccagctgaagaattcttcaaaagcaacttccctgacagcttgcaaatagagagacatcac
aacatgatccagtatcagctgtcttcatcatcattatccaaaatcttccagttactcatc
tccaacaaagagcagctgaagatagatgaatactcagtctcacaaacaactttagaccag
gtatttgtgaactttgccaaacaacagacagctgaggatgacaatcttgctctccatcca
cgtgctgctggggccaggagggaagtaaaggtatccccagctaaagtggaacccagtcaa
ccgaatactaccagcacttccaagactgagttaaataacgagaagaaatcctga
DBGET
integrated database retrieval system
