Chiloscyllium plagiosum (whitespotted bambooshark): 122554195
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Entry
122554195 CDS
T08871
Symbol
abcd3a
Name
(RefSeq) ATP-binding cassette sub-family D member 3a
KO
K05677
ATP-binding cassette, subfamily D (ALD), member 3 [EC:
7.6.2.4
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla02010
ABC transporters
cpla04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122554195 (abcd3a)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122554195 (abcd3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpla02000
]
122554195 (abcd3a)
Enzymes [BR:
cpla01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
122554195 (abcd3a)
Transporters [BR:
cpla02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD3 subgroup
122554195 (abcd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_23
SMC_N
AAA_21
AAA_27
BrxL_ATPase
AAA_29
AAA_16
nSTAND1
Motif
Other DBs
NCBI-GeneID:
122554195
NCBI-ProteinID:
XP_043554781
LinkDB
All DBs
Position
11:20105746..20183069
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AA seq
565 aa
AA seq
DB search
MLVARTYCDVWMIQNGTMIESAIIGRSTKDFKKYLFNFVAAMPAISLVNNFLKFGLNQLK
LRFRVRLTTYLYGEYLKGYTYYKMGNLDNRIANADQLLTQDVEKFCNSVVDLYSNLSKPL
LDIFLYIFKLTSAIGAQGPASMMAYLIVSGLLLTRLRRPIGKMTMTEQRYEGEYRYVNSR
LITNSEEIAFYHGNSREKQTIHTTFKRLVDHLHNFIVFRFTMGFVDSIIAKYLATVVGYL
VVSRPFLNLSHPRHLQSNHAELLEDYYQSGRMLLRMSQALGRIVLAGREMTRLSGFTARI
TELMQVLKELNSGKYERTMVSHQDKGSKSQPLIPGSGEIIIMDHVIKFEHVPLVTPNGDV
LIPDLSFEVKSGANVLVCGPNGCGKSSLFRCLGELWPLFGGRLTKPDRGKLFYVPQRPYM
TLGTLRDQVIYPDTLEDQRRKGISDQVLKEYLDNVQLGHILEREGGWDCIQDWMDVLSGG
EKQRMAMARLFYHKPQFAILDECTSAVSVDVEGYIYSHCRKVGITLFTVSHRKSLWTHHE
YYLHMDGRGNYEFKPITADTVEFGS
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcttgttgcacgaacctactgtgatgtctggatgattcaaaatggaaccatgattgaa
agtgcaattattggtcggagcaccaaagatttcaagaaatacttattcaacttcgttgct
gcaatgccagctatatctctggtaaataattttctgaagtttggtttgaatcaactaaaa
cttcgattcagagtacgactcaccacctacctgtatggggagtatttaaaaggctataca
tactataaaatgggtaatcttgacaatagaatagcaaatgcggaccaactattaactcaa
gatgtggagaagttctgcaacagtgtggtggacttgtattcaaatctcagtaagcctctt
ttggatatatttctgtatatatttaaactaacaagtgcaataggtgctcagggtcctgca
agcatgatggcttacctgattgtttcaggtttgcttctgactcgacttagaagaccaatt
ggtaaaatgacaatgacagagcaaagatatgaaggcgaatacagatatgtcaactcacgg
cttattacaaatagtgaagaaattgctttttatcatgggaacagtcgagagaaacagact
atacataccacgtttaaaaggctggtcgatcacctgcacaatttcattgttttccgcttc
actatgggatttgtggacagtataattgccaaatatcttgctactgttgttggttatctg
gttgtaagccgacctttcttgaacctttctcaccctcgccatctgcaaagtaatcacgct
gaactgttggaggactactatcaaagtggtcgtatgttactgagaatgtctcaggcactt
ggtagaattgtgctggctggacgtgagatgacgagattgtctggcttcacagctcgaatc
actgaattaatgcaagttttgaaagaattaaatagtggaaaatatgaacgcacaatggtt
tcccatcaagataagggttccaaaagtcaacctttaatacctgggagtggggaaatcatt
attatggatcatgttatcaaatttgaacatgtgccattggtgacaccgaatggggatgtt
ttgattccagacctctcttttgaggtgaagtcgggagcaaatgtcctggtctgtggtccg
aatggatgtgggaagagctcacttttccgctgtttaggagagttatggcccctatttgga
ggacgtttgacaaaaccagatagagggaagctgttttatgtaccacagcgaccatatatg
accttaggaacactgagagatcaggtgatctacccagatacactggaagatcaaaggagg
aaaggcatatctgatcaggtactgaaagagtatcttgataacgtccagcttggccatatt
ctggagcgtgagggaggctgggattgcattcaggactggatggatgtactcagtggaggg
gagaaacaacggatggctatggctcgattattctaccacaaaccacaatttgctatttta
gatgaatgtaccagcgcagttagcgtggatgttgaaggctatatatacagtcattgcaga
aaggttggcatcactttgttcactgtgtcacacagaaagtctctctggactcaccatgag
tactacctgcacatggatggcagaggcaattatgaatttaagccaattactgcagacaca
gtggaatttggttcttaa
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