Chiloscyllium plagiosum (whitespotted bambooshark): 122554246
Help
Entry
122554246 CDS
T08871
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122554246 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122554246 (rad54l)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
122554246 (rad54l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
122554246
NCBI-ProteinID:
XP_043554904
LinkDB
All DBs
Position
11:29044856..29092764
Genome browser
AA seq
584 aa
AA seq
DB search
MWDCVTGRRISNGFGCIMADEMGLGKTLQCISLMWTLLRQSPDAKPEIEKVIVVTPSSLV
KNWYNEVEKWLGGRLHALPIDGGTKTEIDQKLATFMNQHGLRIPTPILIISYETFRLHAD
VLCKGSVGLVICDEGHRLKNSDNLTYQALNDLKAKRRILISGTPIQNDLLEYFSLVHFIN
AGILGTAQEFKKRFELPILKGRDADASDSERQHGEEKLKELISIVNRCLIRRTSDILSKY
LPVKIEQIVCCRLTPLQSELYKLFLKQAKPAIEMEQAHSGKMSVSSLSSITSLKKLCNHP
TLIYEKCVEGEEGFQGALNLFPSGYSTKSVEPQLSGKMLTLDYILAMTRSTSSDKVVLVS
NYTQTLDLFEKLCRDRRYLYVRLDGTMTVKKRAKIVERFNNPTNPEFIFMLSSKAGGCGL
NLIGANRLVMFDPDWNPANDEQAMARIWRDGQKKICYIYRLLSTGTIEEKIFQRQTHKKA
LSSCVVDEEQDVERHFSLGELKELFTLNETTASDTHERLKCRRCVNGHQVRRPPEGSDCT
SDLSQWNHCADKRGLRDMVLQSAWDAAISFVFHHHSHEQQHGVI
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtgggattgtgtgacaggtcgtcgtatttcaaatggctttggctgcattatggcagat
gagatgggactggggaagacattacagtgcatttccttgatgtggacgctcttgcgacaa
agcccagatgccaagccggaaattgagaaagtcattgttgtgactccatccagtttggtg
aaaaactggtataatgaggttgagaaatggctgggaggaaggttacacgcattgcctatt
gacggaggaactaagacagagattgaccagaaactcgccacattcatgaaccagcacggg
ttacgaattccaactccaatcctcataatttcttatgagacgttccggctacatgctgat
gtgctctgcaagggttctgtcggcttggtcatttgtgatgagggccacaggttgaagaat
tcagacaacctgacctaccaggctctgaacgatctaaaagctaaacgacgtatattgatc
tcaggaactccaattcagaatgacctcctggagtacttcagtcttgtacattttattaat
gcaggaatactcggaactgcacaggaatttaaaaagcgatttgaattgcctatcttgaaa
ggccgggatgctgatgcaagtgacagtgaaagacagcatggagaggagaaactaaaggag
ctgatcagcattgtaaataggtgtttaattcgaagaacatcggatattctttccaaatac
ctgccagtgaagattgagcagattgtctgttgcagactcacgcctctgcagtctgagttg
tacaagctgttcctaaaacaagccaaaccagcaatagaaatggaacaagctcacagtggg
aagatgagcgtctcctctctatcttcaattacttcactaaagaagctttgtaaccaccca
acattgatctatgaaaaatgtgtggaaggtgaggaaggatttcagggagcactcaatctc
tttccatcaggatatagcacaaaatctgtggaacctcagttgtctggcaagatgctcacc
cttgattatattttggccatgactcgaagtactagctctgataaggtggtgctagtatca
aactacacccagactcttgatttgtttgagaagctctgcagagacaggagatacctgtat
gttcgattggacggtaccatgacagtgaaaaagagggctaaaattgtggaacgttttaat
aatcccacaaatcctgagtttatcttcatgttgagtagcaaagctggtggctgtggcttg
aatctgattggtgcaaatcggttagtcatgtttgatccagactggaatccagctaatgat
gaacaagcgatggctcgtatatggcgagatggacagaagaaaatttgctacatctacagg
cttttgtcgacagggacaattgaggagaagatcttccagcggcagactcataaaaaagct
ctgagtagctgtgtagtggatgaggagcaagatgtggaacgacacttctcccttggagaa
cttaaggagctctttactctaaatgagaccacagccagtgacacgcacgaaaggttaaaa
tgtcgccgttgtgtaaatggacaccaggtgcgtcgtcctcctgagggctcagactgtaca
tccgatctttctcagtggaatcactgtgcagataaacgtggactacgagacatggtccta
cagtctgcttgggatgctgccatttcctttgtgtttcatcatcactcgcatgagcaacag
catggagttatataa
DBGET
integrated database retrieval system
