Chiloscyllium plagiosum (whitespotted bambooshark): 122554418
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Entry
122554418 CDS
T08871
Symbol
lrrtm1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
122554418 (lrrtm1)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_6
LRR_14
LRR_NXF1-5
LRR_LRWD1
HemY_N
Motif
Other DBs
NCBI-GeneID:
122554418
NCBI-ProteinID:
XP_043555390
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Position
1:19423798..19427883
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AA seq
525 aa
AA seq
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MDFLLVALSLQWLLQKPSVWLACVLGLLLEMLPGAESVCASQCRCDGKLLYCESQSLGEM
PRNLSGLQGLSLRYNSLSELRADQFAGVLQLTWLYLDHNHIYSVDGAAFRGLRRLKELVL
SSNKITQLPNSTFRPMPNLRHVQLSYNNLQSLEPDLFHGLRKLQTLHLRSNALKYIPVRI
FQDCRSLEFLDVGYNQLQSLARNAFAGLLKLTELHLEHNDLVKVNFAHFPRLLSLRTLYM
QWNKVSIVVNSLEWTWNHLEKLDLSGNEIEFIESYAFEVVPNLKILQLDSNRLTTIEQTI
LDSWKSLTSISLSGNSWECSRNICALATWLSSFKGHHEGSLLCASPVHTQGEEVLDAVHG
FHICDDLVTSTLAISDITSVAETNQDMTAVRDASSIYVTQDTTGIKTTDLITATSELSHD
QQENTIQVHKVITGTMALLFSFLIVVLVLYVSWKCFPAGLRHLRQCFVTQRRKQKQQQTM
HQMAAMSTQEYYVDYKPNHIEGALVIINDYGSCSCHQQPARECEV
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctccttgtggctcttagtctccagtggctgctgcagaagccttcagtgtgg
ttggcgtgtgtactcggcttgttgttggaaatgctccccggcgctgagagtgtgtgcgcc
agtcagtgccgttgcgatgggaagctgctgtattgcgagtcgcagagcctgggcgagatg
ccgcggaacctgtcggggctgcagggtctgtcgctgcgctacaacagcctgtcggagctg
cgcgccgatcagttcgccggcgtgctgcagctcacttggctctacctcgaccacaaccac
atttactcggtggacggcgccgcattccgcgggctgcggcgcctcaaggagctggtgctc
agctccaacaagatcacccagctgcccaactccactttccggcccatgcccaacctgcgc
catgtgcagctttcctacaacaacctgcagtccctggagccggaccttttccacggcctg
cgcaagctgcaaacgctgcacctgcgctccaacgcactcaagtacattccggttcgaata
ttccaggattgccggagcctcgagtttctggacgtaggatataatcagctacagagcctt
gcccggaatgcgttcgcgggcttgttgaaactaactgaactccacctggagcacaacgat
ttggtgaaagtaaactttgctcatttcccacggctcctctccctaagaaccctctacatg
cagtggaataaagtcagtattgtagtgaattctttggagtggacttggaaccatctagaa
aaattagacctctctgggaatgagattgagtttattgaatcttatgcctttgaagtagtg
cctaacctcaagatacttcaattggattcaaatcgcctaaccaccatcgaacaaacaatt
ctggattcttggaaatccctaaccagcatcagtctttctggaaacagctgggaatgcagt
cggaatatctgtgctttggccacctggctgagcagttttaagggtcatcatgaaggcagc
ctgttatgtgccagccctgtgcatactcagggcgaggaggttctagacgctgtgcatggc
tttcacatatgtgacgacttggtcacaagcacactggcaatttcagacatcacgagtgtg
gcagaaacaaaccaagatatgacagcagtcagagatgcttccagcatctatgtcacgcag
gatacaacaggaataaaaaccactgatttaatcactgccactagtgagctttctcacgat
caacaggaaaatactattcaggttcacaaagtaatcaccggcaccatggcattgcttttc
tcctttctgatagtggtgttagtgctgtatgtctcatggaaatgttttcctgctggcctc
aggcacttgaggcagtgctttgtgacacagcgccgcaagcaaaaacagcaacaaactatg
catcagatggctgccatgtccacgcaggaatactacgtggactacaaacccaatcatatt
gaaggggcactggtgatcattaatgattatggatcatgttcgtgtcatcaacaaccagcc
agagaatgtgaagtataa
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