Chiloscyllium plagiosum (whitespotted bambooshark): 122554437
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Entry
122554437 CDS
T08871
Symbol
atg4c
Name
(RefSeq) cysteine protease ATG4C isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04136
Autophagy - other
cpla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122554437 (atg4c)
04136 Autophagy - other
122554437 (atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpla01002
]
122554437 (atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122554437 (atg4c)
03029 Mitochondrial biogenesis [BR:
cpla03029
]
122554437 (atg4c)
Peptidases and inhibitors [BR:
cpla01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
122554437 (atg4c)
Membrane trafficking [BR:
cpla04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
122554437 (atg4c)
Mitochondrial biogenesis [BR:
cpla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122554437 (atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
122554437
NCBI-ProteinID:
XP_043555388
LinkDB
All DBs
Position
11:complement(59300056..59362408)
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AA seq
473 aa
AA seq
DB search
MEDTEPDEVDKLKAKFMSAWHNMKYSWVVRTKTNFSRDTPVFLLGKCYHFKSEGMVESAS
GCRDAATSTEMVLCNVNQFRKDFITRIWLTYRREFPQLKGCTLTTDCGWGCTLRSGQMLL
AQSLLLHFLGRDWLWPDALQMVTLETELFKAKQPTMSDDFAGFTFLPPLESPLQHMSEQL
GSSSNEKQTLKLNPVSTANEDEKFHRKIISWFADIPAATFGMHKLIELGENSGKRAGDWY
GPAVVAHILRRAVEDAVEPELQGITVYVAQDCTVYIADVIEKHSQVIGYGVPKSSDRTAV
VILIPVRLGGEKVNLEYKEIVKGILSLEFCVGIIGGKPKQSFYFVGFQDDSLIYMDPHYC
QSFVDVTPKDFPLESYHCPSPKKMPFSKMDPSCTIGFYSHSKADFDKIIDEVTKVLNSPS
SKEKYPLFTFSSGHARDYDIDKLCMPKTDTAAQLSEVPRRKSEKLSNEEFVLL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggaggataccgaacctgatgaagtggataaactgaaggcgaagtttatgtcagcatgg
cacaatatgaagtacagctgggttgtgagaaccaaaacaaattttagcagagatactcct
gtctttttgctgggaaaatgctatcatttcaagtcagagggaatggttgaaagtgcgtca
ggctgcagagatgcagctacaagcacggaaatggttttgtgtaatgtgaatcaattccgt
aaagatttcatcactagaatctggctaacgtatcgccgtgagttcccacagttaaaaggt
tgtacactcacaacagattgtggctggggctgcacactgagatctggtcaaatgcttttg
gcccaaagtcttctgctccatttccttggacgagattggctctggccagatgcacttcaa
atggttaccttagaaactgagctattcaaagccaagcaaccaacaatgtctgatgacttt
gcaggttttaccttcctgccacctttagaaagtccactacagcatatgagtgaacagctg
ggctcatcaagtaatgaaaaacaaacactaaagttaaatcctgttagtacagcaaacgag
gatgaaaagttccataggaaaataatttcctggtttgcagacattccagcagctaccttt
ggaatgcataagttgatagaattgggagaaaactctggaaagcgagctggggattggtat
ggaccagctgttgttgcccacattttaaggagagcagtggaagatgcagtggagcccgag
ctgcaaggaataacagtttacgttgctcaggactgtacagtttatattgctgatgtaata
gaaaaacattcacaagttattggatatggagtaccaaaatcatcagacaggacagctgtt
gttatcctaataccagtgagacttggaggggagaaggtcaaccttgagtacaaagaaatt
gtaaaggggatcttgagtcttgagttctgcgttggaattattggtggaaagccaaaacaa
tctttctactttgtgggatttcaagatgatagtttgatctacatggaccctcattactgc
cagtcatttgtggatgtcacaccgaaggattttccacttgagtcatatcactgtccttct
ccgaaaaagatgccatttagtaagatggatcccagctgcacaatagggttttattcacac
agtaaagctgattttgacaaaataattgatgaagtaacaaaggttctgaattcaccgtct
tccaaggagaagtatccattgtttactttttcaagtggacatgctagagattatgatatt
gataaactttgcatgccgaaaactgatacagctgcacaactctcagaggttccaaggaga
aaatcagagaaattgagtaatgaggagtttgtcttgctgtaa
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