Chiloscyllium plagiosum (whitespotted bambooshark): 122554466
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Entry
122554466 CDS
T08871
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122554466 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122554466 (tprb)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122554466 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
122554466
NCBI-ProteinID:
XP_043555470
LinkDB
All DBs
Position
11:63081366..63229702
Genome browser
AA seq
2366 aa
AA seq
DB search
MAADVLQQLFDRSELAKLPRLTVAKLEKLITDKEADVTNLKAKYERFKIDSEQQYFEVEK
RLTQGQEKLVSEMQECQKLREEVSALNEQLKVIKAKNEELGSAQEKLISVENQLARTKDE
LDNEKRELVRTLERRSQEVERLNEDLKCLNDKLVEANSAKIDLQLKLDEFQVSEVSVKYR
EKRLEQEKELLTNQNSWLNAELKTKTDELLELRREKSNEILELRCSLETKKDEMCSMDEQ
MQTLKVTKENFEKQIEELMSKLKESKEQSAVMEERFRNELNAHVKLSNLYKGSADDAEAK
ATELTRAVEELHSLLKQANEAHKITEDQLIEVDASKTRIVAELNEKINQLEKELENANHL
LSATKRKGVAILSEEELSAMSPTAAAVAKIVKPGMKLTELYNGYVEAQDQLLLAKQENKR
VSKYLAEIVKEVEMKAPLLRRQREEYQRVQKAVPHLSAKLEDAMKEIRRLQKDTDQANKH
SSLLTRENQRLKMQVADLSQQNRILLMELEDARGNHILREDEVSSADISSSSEVITQHLV
TYRNVEELQQQNQQLLVAIRELAEKQEKEEQEKTSTRISELEANLSEALSELERLRKART
QQMHLVESIVRQRDMYRILLAQMTGVTIPIQETEGTSLISTTPKSSPRRSEQMPQMTSTP
APIPIADSTELVQAKTALKQLQLHFESYKTEKAENDKMLNEQNEKLQDQLTQLRNQRTKL
STQLEFASKRYEMLQNNVDGFRREIASLRDRCQKLTTTVQKQEHIISNVTQDLRASNEKL
ALEETRGENLRKEQELLKMIEVRLTQERDSKFAALRGQNLLLTNLQSIQLTLERAETETR
QRLNSQIEKQEHEIEKLKKKVDQWHSLGRNQDIQILELKKQLETESNLHMKTKELLKNAE
KEINTLKLSLNNVETELAEIKGGDSKGKSNTEDDVDDLQTQLRQAEEQANELRERLETTT
SNVEKYRDMVIDLEESLSKEKQVTEEVRDAVETRLKEAAEYQTQLEKRMLEAENEKQALT
DEKLKAIENLEQQISELRRNLKSLQAELYDAVQQATAAATNEQQARADCQEQARIASEAQ
NKYERELMLHAADVEALQIAKEQVVMNSQVRQKLEDAAQKAETQMLECKTAKDDIERILK
DEISQLITRNEDLQKQNKLLLEQVESLSNKMVTTVQEANQSSLNISFNEEGKSQEQLLEI
LRFVRREREIAETRFEVAQVESLRYRQQVENLERELKEMQENLNSEREKMQVTAKTLAQH
DELMKKTETMNVLIETNKMLRDEKERLEQELQQSRAKIYKMESDILPLQESNTELSEKSG
MLQAEKKLLEEDLKRWKARAQQLISLQKETDPDEYKKLVSEKDTNTKRIQQLTEETGKLK
TELARLNASSSVSQRDVQTLKTELSKVTNERDKLKQEMLARVSDIQEKNKTITQVKKIGR
RYKTQYEELKAQHDKMVAETSSQFTAEQQAEQPSSQATQELQETLAQSESRAKALESQAE
ALQKSVTEKESEVTKLQDEVSQLHSELSRLRQELQDKGSLEEQLRQQIVEKEEKTKKAIL
VAKQKITQLAGLKEQLAQENEQLKQHNEEFQQRITSLDQQREELEVRMSALKSQYDGHIA
RLKRELKEHQDRQHEQREEPQEITKTSEPQRQLDQQRQITLKQTPASVDRGSLSTSDPPT
ANIKPTPLVATPSKVAAGPVAGSKSTPRASIRPMVTPATVTGPATTPTATVMPTTQVETQ
EAMQSEGPVEHVTVFGSTSGTVRSTSPNIPNLSQPILTVQQQQTQATAFVQPTQQTLQVE
PANQEPSSSVVDVIQSSQVERPSTSTAVFGTVSATTVSKRQREDDDEMNAENVGHSQDES
LEHQSKKLRVVRVEEHLQEVEESAETDTVMQVQPENLDSQDSISQVVIEDYPPSQLMEDN
EETSHSLDLVPQPPEHQQNTQSSQNSQTQTEYIIIESDEDPENEEDQEQEEYDEDDEDDD
TGIEDGDGEDSNGGSPDGEDNYDGGDAEGADGTEQSAENEQSGSICKEGESTQIPEDNSA
GGEGNVPTTDSYTSEASREQQAISERQAPRLLRSPRRPPHPLPPRLTIQPPAQELGPPAQ
RFPPARRPSSSRGGIQLTPGVGGVQQHFFDEDDRMVPSTPTLVVPHRSDGFAEAIHSPQV
IGVPRFRFGPPEDMSQTSSSQSDLGQLASQGGLGMYETPIYLAAVHEDESGGRSVPTTPL
QVHAPVTVFNEGAQSDVTEHASQSVPMVTTSTGGLSSTADSGGGDDGDEVFMEGADQEGL
SSDVMEIEGHQEEESVQPSEEADLPSTSQDPPSSSADASVSQPKPLRRVRLYPQMGRTVA
RGRQFISRRGMSHSMSGRGINRGNHN
NT seq
7101 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggatgttttgcagcagttgtttgatcgtagtgaactcgccaaactccccaga
ctgaccgtggccaaactcgaaaagctgatcaccgataaagaagcggacgtaactaacctg
aaagctaaatatgaacgttttaaaattgacagcgagcaacagtattttgaagtggaaaaa
cgactcacccaggggcaagaaaagttagtgtctgagatgcaggaatgtcaaaagctgcgt
gaggaagtttctgcacttaatgagcaattgaaggtaatcaaagcaaaaaatgaggaacta
ggatccgcccaggaaaaactgatcagtgtagagaatcaacttgcacgcacaaaagatgag
ttggataatgaaaaacgagaactcgtgagaacacttgagcgtcggtcacaggaagtggaa
cgcttgaatgaggatttgaaatgtctcaatgataaacttgtcgaagcaaattcagcaaag
atagatcttcagttaaaacttgatgaatttcaggtatcagaagtctctgttaagtatcgt
gaaaaacgtcttgaacaggaaaaggagttactgacgaaccagaatagttggttgaatgca
gaattaaagaccaaaactgatgagctacttgagcttcgtcgtgaaaagagcaatgaaatt
cttgaactcagatgcagtctagagaccaaaaaagatgagatgtgcagcatggatgagcag
atgcagactttgaaagtcacgaaggaaaactttgagaagcaaattgaggaattaatgagt
aaattgaaagagtctaaggagcagtcagcagtcatggaggaaaggtttcgaaatgaactg
aatgcccatgtgaagttgtcaaacttgtacaagggttctgcagatgatgcagaggcaaag
gcgactgaactgaccagagcggttgaggagcttcatagtctactgaaacaagcaaatgaa
gcccataaaatcactgaagatcaactgattgaggtcgatgcctcaaagaccagaatcgtt
gctgagctgaatgaaaagatcaaccaacttgaaaaagaattggaaaatgctaaccatctc
ctgtcagctacaaaacgtaaaggagtggccatcctttcagaagaagaactttcagctatg
tcacccactgcagcagctgttgctaagattgtaaagcctggaatgaaacttacagagtta
tataacggatatgtagaagcccaagaccaattgctactagcaaaacaggaaaataagaga
gtcagcaaatatttggctgaaattgtgaaagaagtggaaatgaaggctcctcttttgagg
cgtcagcgggaagaatatcagcgggtgcagaaggctgtaccacatctctctgctaaacta
gaagatgctatgaaggaaattcgccgtttacaaaaagacactgatcaagcaaataagcat
tcttcattgctcaccagagagaaccagagattaaaaatgcaagtggcagacctctctcaa
cagaatagaatccttttgatggaactggaggatgcacgtggaaaccatatcctgcgtgag
gatgaggttagttctgcagatataagcagttcctctgaagtcattacacagcaccttgta
acctatcgtaatgttgaggagttgcaacaacagaatcagcagctgctggtggctattcgt
gaacttgccgagaaacaggaaaaggaggagcaggagaaaacatcaacacgaatttctgaa
cttgaagcgaatctttcggaagctttgagtgaacttgaacgactgcgtaaagcacggact
caacaaatgcatttagtagaatcaattgtccggcagcgtgatatgtatcgaatactactt
gcacagatgactggagtgaccattccaattcaggaaacagaaggcacatctttgatttca
acgactccaaaatcatctccaaggagatccgaacaaatgccacaaatgacgtccacacca
gctcccattcctattgcagactcgacagagcttgtgcaagcaaagacagcattgaaacag
ctccagttgcactttgaaagctacaagacagaaaaagcagagaatgataaaatgttaaat
gaacaaaatgaaaaacttcaagatcaactgacacaattgcgaaaccaacgcacaaaactt
tctacacagttggaatttgcttctaaaaggtatgagatgctacagaacaacgtagatgga
tttcgccgtgaaatagcatccttgcgagatagatgtcagaaactcaccacaactgttcag
aaacaagaacacataattagcaacgtaactcaagatttgcgagcatcaaatgaaaaatta
gctctggaggagactcgtggagaaaatttaagaaaagagcaagagttgttgaagatgatt
gaagtgcgtcttacccaagagcgagattcaaagtttgctgcgctcaggggtcagaacttg
ctgctaacaaatttgcagtctattcagttgactctggaacgtgcagaaactgaaactagg
caacgtttaaacagccaaattgagaaacaagaacatgaaatagagaagctgaaaaagaaa
gtggatcaatggcattcacttggcagaaaccaagatattcaaattctggaactcaagaag
cagcttgaaactgaatctaatctccacatgaagactaaggaactcctgaaaaatgcagag
aaagaaattaataccttgaagttatcccttaacaatgttgaaactgaactggcagagatt
aaaggaggcgattctaaaggaaaatctaatacagaagatgatgttgatgatctccaaaca
cagcttcgacaggctgaagagcaggcaaatgaattgagagagcgtctcgaaactactaca
agcaatgtggaaaaatacagagacatggttattgatctggaggagtcccttagtaaggag
aagcaggtgaccgaagaagtacgcgatgctgtagaaacacgcctcaaagaggcagcagag
taccaaacgcagttagaaaagcgcatgttggaagcagagaatgagaaacaagctctcact
gatgagaaactgaaagcgatagaaaacctggaacagcagattagtgaactaaggaggaat
ttgaaaagtctccaggctgaactttacgatgctgttcagcaagcaacagctgctgcaacc
aatgaacagcaagccagggctgactgtcaagaacaggcaaggatagcctctgaagcacag
aataaatatgagcgtgaactgatgctccatgctgctgatgtagaagcactgcagattgcc
aaagagcaagtagtcatgaactctcaagtaaggcagaagttggaagatgctgctcagaag
gctgaaacacagatgttggagtgtaagactgctaaagatgatattgaaagaattttgaag
gatgaaatttctcagctgataacacgtaatgaggatctgcagaaacagaacaaactgttg
cttgagcaggtggagagccttagtaataagatggtaaccacagtgcaagaagcaaatcag
agttccctaaatatttcttttaatgaagagggcaagtcccaggaacagctacttgaaatt
ttgagatttgtgcgacgagaaagagaaattgctgaaaccaggtttgaagttgcccaagtt
gagtcactgaggtaccgccagcaagtcgagaatttggagagagaattgaaggagatgcaa
gaaaatctaaattctgaaagggagaagatgcaggtaactgccaaaacactggcacaacat
gacgagctaatgaagaagactgaaactatgaatgttcttattgaaaccaataagatgctg
agagatgagaaagaaaggttggagcaagaactccagcagtcacgggcaaagatttataag
atggagtctgatatcctgcctcttcaagaatctaatactgaacttagtgagaaaagtggc
atgttgcaagctgagaagaagttgcttgaagaggatctcaaacgttggaaagcccgtgct
cagcaattaataagcctgcagaaagagactgatcctgatgagtataagaagctagtatca
gaaaaggatacaaataccaaacgcattcaacaattgactgaagagactgggaagctgaag
actgaacttgctcgactgaatgcatcatcctctgtatcacagcgggatgtacagactttg
aagactgaactcagtaaagtgaccaatgaacgggataagttgaaacaagagatgttggca
agggtgtcagatattcaggaaaagaataaaacaatcactcaggttaaaaaaattggtcga
aggtataagactcaatatgaggagttgaaggcccaacatgataagatggttgctgagaca
tcctctcaatttacagcagagcagcaagcagagcagccctcttctcaagccactcaggag
ttgcaagaaacactggcccagtctgaatctagagctaaggcacttgagtctcaggctgaa
gccttgcagaagtctgttactgaaaaggaatctgaagtgacaaaattgcaagatgaagtt
tcccaattgcatagtgaactttcccgcttgaggcaggagctgcaggataaaggaagtctt
gaagagcagcttcgacagcagattgtggaaaaggaagagaagacgaagaaagcaattttg
gtagccaagcagaagataacacagttggctggattgaaggagcagttggcacaagaaaat
gagcaattgaagcagcacaatgaagaatttcaacaacgtatcactagtttagatcagcag
agagaagaattggaggtgcgtatgagtgcactaaaatcgcagtatgatggtcacattgct
cgacttaagcgggagctgaaggaacatcaggatcgacaacatgaacagcgtgaagaacca
caagaaataaccaaaacttctgaaccacagagacaactggatcaacagcgacagataacc
ctcaaacagactccagcatccgtggacagaggaagtttgagtacatccgatcctccaaca
gccaatataaagccaactcctcttgtggcaacacccagtaaggtagctgctgggccagta
gcaggcagtaaatctacaccaagagccagtattcggccaatggttacccctgcaaccgtc
actggaccggctacaacgccaacagctacagtaatgccaacaacacaggtagaaacccaa
gaagccatgcagtcagaaggaccagttgagcatgtaactgtttttggtagcacaagtgga
actgtacgttcaacaagtccaaatatcccaaatttgtcacaaccgattttaactgtgcag
cagcaacagacacaagcaactgcctttgtgcaacccactcaacagactcttcaagtagaa
cctgcaaatcaggagccatcctctagcgtggtagatgtcatacagagctcccaggtagaa
agaccttcgacctctacagcagtgtttggaacagtttcagccaccaccgtgtccaagcgt
cagcgggaagatgatgatgagatgaatgcagaaaatgtaggtcatagtcaggatgaatct
ctggaacatcagtcgaagaaattgagagtagttcgagtggaagaacatttgcaggaggtg
gaagaaagtgctgaaacagacacagtcatgcaggtgcaaccagagaacctagattcacaa
gactctatctctcaggtggtcattgaagattaccccccttctcaactgatggaagacaat
gaggaaacatctcattctttggatttggttccccaaccacctgaacaccaacagaacacc
caatcatcacaaaattctcagacacaaactgaatatattataatagagagtgacgaagat
ccagaaaatgaagaggaccaagagcaggaggaatatgatgaggatgatgaggatgatgat
actggaattgaggatggtgatggtgaagatagtaatgggggtagtcctgatggagaagat
aattatgatggtggcgatgcagagggtgctgacgggacagaacagagtgcagaaaatgaa
caaagtggtagcatttgtaaagaaggagaaagtactcaaataccagaagataattcagct
ggcggtgaaggtaatgtccccaccacagattcttatacttcagaagcttctcgagaacag
caggccatatctgaaagacaggccccacgactactacggtcaccacggagaccacctcat
cctcttcctccacgattaacaattcaaccgccagctcaagaactggggccaccagcacag
cgatttccacctgcacgacgtccttcatcaagccgaggaggaattcagcttactccaggt
gttggaggtgtgcagcagcacttctttgatgaagatgacaggatggtgccaagtacacca
actcttgttgtgcctcatcgatcagatggctttgcagaagccattcattctccccaggtt
attggagttcctcgattcaggtttggacccccagaagatatgtctcaaaccagttcaagt
cagtcagaccttggacagttggcatcacaaggaggactaggaatgtatgaaactcccatt
tatcttgctgctgttcatgaagacgaatctggaggccgcagtgtcccaactacacctctg
caagttcatgcaccagtcacagttttcaatgagggtgcacaatcggatgtaactgaacac
gcttctcaatctgttcccatggttacaacatccacgggaggcctgtctagcactgcagat
tctggaggtggtgatgatggggatgaagtgtttatggaaggagcagaccaagagggtctt
agttcggatgtcatggaaattgaagggcatcaggaggaggaatctgttcagccatctgaa
gaggcagatctgccatccactagccaggatcctccttccagttcagcagatgccagtgtc
agtcagccaaagccattgagaagagtacgactttatccacagatggggagaactgttgct
cgggggcgacagtttattagccgaagaggtatgagtcattcaatgtcaggcagaggaata
aacagaggaaatcataattga
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integrated database retrieval system
