Chiloscyllium plagiosum (whitespotted bambooshark): 122554491
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Entry
122554491 CDS
T08871
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122554491 (lrba)
Membrane trafficking [BR:
cpla04131
]
Endosome - Lysosome transport
Others
Others
122554491 (lrba)
Endosome - Golgi transport
122554491 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
122554491 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
WD40_Prp19
Neurobeachin
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
SUKH_6
EIF3I
Motif
Other DBs
NCBI-GeneID:
122554491
NCBI-ProteinID:
XP_043555541
LinkDB
All DBs
Position
1:complement(152720575..153596208)
Genome browser
AA seq
2872 aa
AA seq
DB search
MSSEGERPQLADSEGGQTATAPGEQAADEGHVSQPSGTRTSPDGDAAISLGLNPPVPIRG
IRMKFAVLSSLTQAGEVTNRDIVETIFNLLVGGQFDLEMNFIIQDVESIACMVKLLDSCD
VTCQAEVWSIFTAILKKSIRNLQACTDAGLIEHVLKRIHGVNNMIADLLVDMLGVLASYN
ITVRELKLLVSKVQGEKQQWPPHAVKLLTIFRQVPQKLSPDAFFSFPGKSAAAIALPPIA
KWPYQNGFTFHTWLRMDPLNNINVDKDKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKG
KGFQHCVKYDFKPQKWYMVTIVHIYNRWKNSEIRCYVNGELASFGEITWLVNTSDTFDKC
FLGSSETADANRVFCGQLGAVYVFAEALNAAQIFAIYQLGPGYKGTFKFKAESDLLLAEH
HKSLLYDGKLSSSIAFTYNPKATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVVTHSV
QSAIHSIGGIQVLFPLFAQLDYRQHSSDQVDSTVCSTLLAFIMELLKNSVAMQEQILSSK
GFLVIGYSLEKSSKVHITGAVLELCLAFAKYLSNLQNGGPLLKQLCDHILLNPAIWIHAP
AKVQLQLYTYLSTEFISTATIYNAVRRVGTVLQIMHTLKYYYWVVNPQDRSGVVPKGLDG
LRPNQKEILSLRALLLLFVKQLIMKDHGVKEDELQSILNYLLTMHEDDNLMDVLQLLVAL
MSEHPGSMIPAFDQRNGMRIIYKLLASKNEGIRVQALKVMGYFLKHLAPKRKAEVMVGHG
LFSLLAERLMLHTNVISMTTYNVLFEILTEQICTQVVHKQHPDPDSSVKIQNSQILKVIA
TLLRNSPQMLETMEVRRVFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYINAKNSDE
QKITEMVYAIFRILLYHAIKYEWGGWRVWVDTLSITHSKVTYEIHKESLARTFEEYQRRD
ESTNQIPTIQTISEISSTQEATIQKDVFEVQSAPHSENVEKQLEKAEGFKQLEGYQEASS
LNTEVQQKNMEQTDKIKKATESLNGTEVTKVITQVDQISNKLPDSLESFEVEKSEVTEMC
MEDVDCSAARSTDVFSDEMTESEVTKVKEKTTTAITTNGQEPNVALDPCDPKVDVVEYSN
NGQQNSINSEENCVSELQDTSQELNISTTASKESSSSSEAVSNHSASVLQEEMIKVKQEM
AKLQTESSTEPLKELDSHTADSSTHDSNSPDKDIGTINTKTRELKVLSAKEIARLDVSSV
AADTERLELRASISQESTMVPKPPIQLSQLELTNQQSVVPDEQRKGSNPSGRATMFRIPE
FKWSPMHQRLLNDLLFSIETDVQMWRSHNTKTVMDFVNSSENIIFVHNTIHLVSQVVDNI
IMACGGILPLLSAATSTTHELENIEPTQGLSFETSVTFLQRLIGLVDVLIFASSLSFTEI
EAEKNMSTGGILRQCLRLVCAVAVRSCLECQQVSRTKSGADNAKTQKAVQSLLGSGKLTA
KSSTDVATGGISPVRDLDRLLQDMDINRLRAVVFRDVEDSKQAQFLALAVVYFISVLMVS
KYREILEPQKDRKLSRSQSVRSTENTDGTTSTTEGSSATAVPMASDAPHAPIRRDSGIGE
DQALSSFTELAAGNETMSEIVSTGPDAMSELLSTLSSEVKKSQSQESKDEIGSDSESKTT
CSIPSGSQSKNVNVKEILRSLVNTPADSLEADMTLIGPTFLGVIGDAAGESSVQFRSFDR
SVVIAPKKPLFAAGSEIVTPATTDAVSVVSTTDSAEDTAIEPTGGGPSNSKLPSVQTVSP
MPEDSATNMSITARLERALEKTAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMK
SSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLCHTMKDHLVRVANEAEFILSR
QRAEDIHRHAEFESLCAQYSAERREEEKMCDHLIRAAKYRDHVTATQLIQKIINILTDKH
GAWGSSSLSRPREFWRLDYWEDDLRRRRRFVRNLFGSTHPEAALKAAIEHGSEEDLLAKG
RQSIRSQAVGNQNSESEILLEGDDDTLTSLEEKEIDNMAGPVNFTTAAQLIAPAVVAKGT
LSITSSELYFEVDDDDPSYKKLDPKILAYTEGLHGKWLFTEIRAIFSRRYLLQNTALEIF
IANRTAVMFNFPDQATVKKVVHCLPRVGVGTGFGLPQTRRITLASPRQLFKASNMMQRWQ
RREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGAL
NPKRAAFFSERHENWEDDQVPPFHYGTHYSTSSFTLAWLLRIEPFTTFFLNLQGGKFDHA
DRTFSAVSRAWRNCQRDTSDVKELIPEFYYLPEMFVNSNNYNLGVMDDGTVVSDVELPLW
AKTPEEFVRIHRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRSLNVFYYLTYEGAVNLN
SINDLVLREAVEAQIRSFGQTPSQLLIEPHPPRSSAMQVYLLLQTPLMFTDQMQQDVIMV
LKFPSNSPVTHVAANTQLGLAVPAIITVTASRLFAVNKWHNVTGLHGAMQEQPYQLPVEI
DPLIANNTGMHRRQITDLLDQSIQVNSQCFVITADNRFILVCGFWDKSFRVYSTETGKLS
QVIFGHWDVVTCLARSESYIGGDCYILSGSRDATLLLWYWNGKKHSVGEYPNNEYAAPRA
ILTGHDCEISCAAICAELGLVISGSKEGPCLIHTMNGDLLKALENPENYLHPRLIQLSTE
GHCIIYYEKGQFCVFSVNGKLLSKMETEDSVKAMLLSRDGQYLIAGGDSGIVAVWQVWDL
KQLMTYPGCDAGIRAMAMSHDQRVIITGMASGSIVLFYIDFNRWHHEYQTRY
NT seq
8619 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgagggtgaacgtccgcagctcgcggactccgagggaggccaaactgccacg
gcaccaggggagcaagcggcggacgagggtcatgtctctcagccgtccggcactaggacc
tcaccggacggcgatgcggctatctccctgggcctcaacccgcccgtgcctattcgtggg
atccgaatgaaattcgccgtgctgtcaagtctcacgcaagccggtgaagtgaccaatcgc
gacatcgtggagaccatatttaacctgcttgtaggaggacaatttgacttggagatgaat
ttcatcatacaagacgtggagagcattgcttgcatggtgaagctgttggacagctgcgat
gttacctgccaggctgaagtttggagcattttcacagcaattctgaaaaaaagtattcgc
aatctacaggcctgtacggatgcagggttgattgaacatgttcttaaaagaattcatggc
gttaacaatatgatagcagatctgcttgttgatatgttaggagtgttggcgagctacaac
ataactgtccgcgagctgaaactactggttagcaaagtgcaaggagagaaacaacaatgg
cctcctcatgcagtgaaattattgaccatattcagacaggtgccacagaaacttagtcct
gatgctttcttcagcttccctgggaagagtgctgccgcaatagctctgcctccaattgct
aagtggccctatcagaatggcttcacttttcacacatggctccgaatggatcctttgaac
aatatcaatgtggataaagacaagccttatttatattgctttcgtactaacaaaggactt
ggatattctgctcattttgttggtggttgtttgattgtgacatcaataaaatcaaaagga
aaaggattccagcactgtgtaaagtatgacttcaagccccagaagtggtatatggtgaca
atagtgcatatttacaatcgatggaaaaacagtgagatccggtgttatgtgaatggtgaa
ttggcatcctttggagagattacatggcttgtgaatactagtgatacatttgataaatgt
ttcctgggatcttcagaaacagcagatgcaaacagagtattctgtgggcaacttggagca
gtttatgtctttgctgaagctctaaatgcagcacagatatttgcaatatatcaattaggt
cctggatataagggtacgtttaaattcaaggcagaaagtgacctcttacttgctgagcac
cacaagtcactgctctacgatggcaagttgtcgagtagtattgcattcacttacaaccca
aaggccacagatgctcagctctgtctagaatcatccccaaaggataatccatctattttt
gtacattctccacatgctctaatgcttcaggatgtcaaagctgttgtaacacattctgta
caaagtgctatacattcaattggtggcatccaggtgcttttcccattatttgcacagctc
gattacagacagcattcttctgatcaagttgacagcacagtttgctccacattgttggct
tttataatggaattactgaagaactctgtggccatgcaagagcaaatactctcttctaaa
ggctttcttgtcattgggtatagcctcgaaaagtcttccaaagttcatatcaccggagct
gttttggaactctgtttggcatttgccaaatacctgagtaatttgcagaatggtggtcct
ctactcaaacagttatgtgatcacattcttctgaatcctgccatatggatacatgctcca
gccaaggttcagttgcagctctacacctacttgtccaccgagtttatcagtacagccacc
atttacaatgcagtacgacgagttggtactgtgctgcagataatgcacacccttaaatac
tattattgggtagtgaatcctcaggatcgcagtggagttgttcccaaaggcctggatggg
ctcaggccaaaccaaaaagagatcctctccttacgggctcttttactattgtttgtgaaa
caattgataatgaaggatcatggtgttaaggaagatgaactgcagagcattcttaactac
cttctcaccatgcatgaggatgacaatctgatggatgttctacagctgctagtagctctg
atgtccgagcatccaggatcaatgattcctgcttttgatcagaggaatggaatgcggata
atctataaactgctggcttcaaaaaatgaagggataagggtgcaagctttgaaagtgatg
ggatactttctgaagcatcttgctccaaagcgcaaagctgaagtcatggttggacatggt
ttgttctccttgctggctgaaagattgatgttgcacactaatgtaatttccatgactacg
tataatgtcttatttgagatcctaactgagcagatttgcactcaagttgtgcataagcag
catcctgacccagattcgtcagtgaagatacaaaactcacaaatcctgaaagtaattgca
acattgttgaggaactctcctcagatgttagaaactatggaggttcggcgtgttttttta
tcggatatgatcaaacttttcaacaacagccgagaaaacaggaggagcttactgcagtgc
tcagtatggcaagagtggatgttatctctttgctatatcaatgctaagaattctgatgaa
caaaaaataacggagatggtatacgctatcttccgaatattgctttatcatgcaataaag
tatgagtggggtggctggcgtgtctgggtggatacactctcaataacccattcaaaggtc
acttatgaaatacacaaggagagtttggccagaacatttgaggagtaccaaagacgagat
gaaagtacaaaccaaatcccaaccattcaaactatttctgagattagcagcacacaagaa
gctacaattcagaaagatgtttttgaggtccagagtgcaccccattctgaaaatgttgag
aagcaattagaaaaagcagaaggtttcaaacaacttgaaggttaccaggaagccagttct
ctgaacactgaagtacagcagaaaaacatggaacagacagacaaaataaaaaaagcaact
gagtcacttaatggcactgaagtaactaaggtgataacacaagtagatcagatatcaaat
aaattaccagattctttggaaagttttgaagttgagaaatctgaagtaactgaaatgtgc
atggaagatgtggactgttcagctgctcgttccaccgatgtgttttcagatgaaatgact
gaaagtgaagtaactaaagtaaaagagaaaacaacaactgcaattactacaaatgggcaa
gagcctaatgttgcattggacccatgtgatccaaaggttgatgtggtagaatattcaaac
aatggacaacagaacagcataaatagtgaagagaactgtgtctcagagcttcaggacact
tctcaagaactaaatatttcaactactgcatccaaagagagttcaagcagttcagaagca
gtttcaaatcactccgcgtctgtactacaggaggagatgatcaaagtaaaacaagagatg
gcaaaattgcaaacagaatcaagcactgaacccttaaaagaacttgacagccacactgct
gattctagcactcatgacagtaatagcccagataaagatattggaacaattaacacaaaa
actagagagttgaaagtcctatctgctaaagaaattgctagattggatgtgtctagtgtt
gcagctgatactgagaggttggaacttcgagcaagtataagtcaagaatctacaatggtc
ccaaagccccctattcagttatcacaactggaacttacaaatcaacaaagtgttgtacct
gatgagcaaagaaaagggtccaatccctcaggacgtgccaccatgtttcgcattccagaa
tttaaatggtctcccatgcaccaacgcctgcttaatgacttgctattctccattgaaacg
gatgtgcagatgtggcgaagccataacacaaagacagtgatggattttgttaacagcagt
gaaaacatcatctttgtccacaacactattcaccttgtctctcaggtggtagataacatc
ataatggcctgtggtgggattctcccacttctatctgcagcgacatctaccacacatgaa
ttggagaacatcgaaccaacacaagggctgtcgtttgaaacctctgtgacttttcttcag
aggctaataggtcttgttgatgtgctgatttttgccagctcacttagcttcactgaaatt
gaggctgaaaagaacatgtctactggaggaatattaaggcagtgtcttcgtttagtatgt
gctgttgcagtcagaagctgtttggaatgtcagcaagtaagtcgaacaaaatctggtgct
gataatgcgaaaactcaaaaagcagtgcagagcctccttggaagtggaaagttaacagcc
aagagttctactgatgttgcaacaggtggtatttcaccagtaagagatcttgaccgattg
ctacaagatatggacatcaatcgacttcgagcagttgtgttcagagatgttgaggacagc
aaacaggcccagtttctagccttggctgtggtgtatttcatttctgtattgatggtgtca
aaatatagggaaattctagaacctcagaaggacagaaaactgtctcgtagtcagtctgtc
agaagcactgagaatacagatgggactacatcaaccacagaaggttcatcagccacagct
gttccaatggcaagtgatgccccacatgctccaattcgaagagactctggtatcggagaa
gaccaggctttaagttcattcactgagttggcagctgggaatgagacaatgtctgagatt
gtcagtactggtccggatgcaatgagtgaactattgtcaaccctttcctcagaggtgaaa
aaatcacagtcacaggaaagtaaagatgaaattggaagtgattctgaaagcaagactaca
tgttctataccatctgggtcccaaagcaaaaatgtcaatgtgaaggaaatcctacgaagt
ctggtgaacacacctgcagatagccttgaagcagatatgacattaatagggccaaccttt
ttaggagttattggagatgcagcaggagaatcatctgtacaatttcgttcttttgacaga
agtgttgtgatagctccgaaaaaacctttgtttgctgctgggagtgaaattgttactcct
gctaccacagatgctgttagtgtggtctctactactgactctgccgaggataccgccatc
gaacctacaggtggtggaccatccaactcaaagctgccatctgttcaaactgtgtctcca
atgccagaggactctgcaacgaatatgagtattacagcaaggcttgaacgtgcactggag
aagacagcccctcttctgagagagatttttgtggattttgctccttttctttcacgtact
ctactgggtagtcatgggcaagaattgctcattgagggtacaagcttggtctgtatgaaa
tctagcagttctgttgtggaattggtcatgttgctctgttctcaggaatggcagaattcc
attcagaaaaatgctggtcttgcatttattgagcttgttaacgaaggaagattgttatgc
catactatgaaagaccacctggtgagagtagcaaatgaggcagagtttatcctgagtaga
cagcgggcagaagatatacatagacatgctgaatttgagtctttgtgtgcccagtactcg
gcagaaagacgtgaagaagaaaagatgtgtgatcacctaatacgagcagcaaagtatcga
gatcatgtgacagccactcagctgatacagaaaattatcaacattttgacagacaagcat
ggtgcttggggaagttcttcactaagtcgccctcgtgagttctggcgccttgactactgg
gaagatgacttgcggcgccgccgccgattcgttcgcaacttatttggatcaacacatcct
gaagcagcacttaaagcggcaattgaacacggttctgaggaagatttgctggctaaaggc
agacagtccattcgaagccaagctgtgggcaaccagaactccgagagcgaaattctgctg
gagggagacgacgatacgcttacttcactggaggagaaggagattgataacatggcggga
cctgtgaatttcaccactgctgcccagctcattgcgccggctgtcgttgctaagggaacg
ctgtcaatcacctcttccgagctctacttcgaggtagatgacgatgatcccagttataaa
aaactagaccccaagatactggcgtatactgaaggacttcatggaaaatggttgttcacc
gaaatacgtgcaattttctccaggcgctatctattgcagaatactgctctagaaattttt
attgccaatcgaactgctgtcatgttcaacttcccagatcaagctacagtcaagaaagtt
gttcattgtttgcctcgtgttggagttggcacaggttttgggctacctcaaaccagacga
atcacccttgctagccctcggcaacttttcaaagcatccaatatgatgcagcgttggcag
cggagggaaatctccaactttgagtaccttatgttcctcaacacaatagctggtcggact
tacaatgatttgaatcagtatccagtttttccttgggtgataactaattatgaatcagaa
gagttggacctgacgctgccaagcaacttcagagatttgtccaagcctattggagccctt
aacccaaaaagagcagccttcttttcggagcgtcatgaaaactgggaagatgatcaggtt
cctccttttcactatgggactcattattcaaccagtagcttcactctcgcatggttgtta
agaattgagccatttactaccttctttctaaacctacaaggaggaaaatttgatcatgcc
gatagaacattttcagcagtgtccagagcatggcgcaactgtcaacgtgatacctctgat
gtaaaggaactgattcctgaattttattatctccctgagatgtttgttaattccaacaat
tataatctgggtgtgatggatgatggaactgtggtgtctgatgtagagcttccactctgg
gccaaaactccagaagagtttgttcgcatacatagactggctctggagagtgagtttgtt
tcctgccagcttcaccagtggatcgacctgatttttggatataagcagcaggggcctgag
gctgttcgaagcctcaatgtcttctattacttgacctatgaaggagctgtcaatctgaat
tccatcaatgacctggtactaagagaggcggttgaagctcaaattcgtagctttggtcaa
actccttctcaacttttaatagagccacatcctcccagaagctctgccatgcaagtgtat
ctcctcctgcagactcctctgatgttcacagaccagatgcagcaggatgttatcatggta
ctcaagttcccatctaactccccagtcacccacgttgctgccaacactcagctgggtctg
gctgtacctgccattatcacagtaactgctagcaggctgtttgctgtgaacaagtggcat
aatgttaccgggcttcatggagctatgcaggaacagccataccagctgccagttgaaatc
gatcctctgatagctaataacactggaatgcacagaaggcaaattactgacctcttggat
caaagcattcaggtcaattcccagtgcttcgtgatcactgctgataaccgcttcattctg
gtatgtggcttctgggataagagtttccgtgtttactccaccgaaacaggtaaactctcg
caagttattttcggacactgggacgttgtaacctgtttagccagatctgaatcatacatt
ggaggggactgttatattctgtcagggtcacgtgatgcaacactgcttctctggtactgg
aatgggaaaaaacacagtgttggagaataccctaacaatgaatatgctgctcctcgggct
atcctaaccggccatgactgtgagattagctgtgctgcaatatgtgcagaactcggtctg
gtcatcagtggttcaaaagagggtccatgcctaatccatacaatgaatggagaccttctg
aaggctcttgagaaccctgaaaactacttgcatcctcgattaatccagttgtccactgaa
ggccactgcattatttactatgaaaagggccagttttgtgtcttcagtgtgaatggaaag
ttgctgagcaagatggagacagaagattctgtgaaggctatgctgctgagtcgtgacggg
caatacctcattgctggtggagatagtggaattgtggctgtgtggcaggtatgggacctc
aaacaactgatgacttatcctggatgtgatgctggtattagggccatggccatgtctcat
gaccaaagggtcatcattactggaatggcatctggaagtatagtactgttttacatcgat
tttaatcgatggcatcatgagtatcaaaccaggtactaa
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integrated database retrieval system
