Chiloscyllium plagiosum (whitespotted bambooshark): 122554608
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Entry
122554608 CDS
T08871
Name
(RefSeq) procollagen galactosyltransferase 2-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00310
Lysine degradation
cpla00514
Other types of O-glycan biosynthesis
cpla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122554608
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
122554608
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cpla01003
]
122554608
Enzymes [BR:
cpla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
122554608
Glycosyltransferases [BR:
cpla01003
]
O-Glycan biosynthesis
O-linked Gal type
122554608
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Pox_P35
Aminotran_4
Motif
Other DBs
NCBI-GeneID:
122554608
NCBI-ProteinID:
XP_043555847
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Position
11:complement(78876859..79050498)
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AA seq
614 aa
AA seq
DB search
MAACTHLPMSLLCLLVLAGTIAGDGAHFPEEIEREESALQRPKVLLAIIARNAAHTLPHY
LGCIERLDYPKDRIALWVATDHNIDNTTAILREWLKNVQKAYHYVEWRPLDNPKYYSDEI
GPKHWSNSRFSHVMKLRQTALKTAREKWADYILFVDTDNLLTNEQTLNLMIAENLTVVAP
MLDSNTLYSNFWCGMTPQGYYRRTPDYVPIREWKHKGCYPVPMVHSTFLIDLRREATKKL
AFYPPHPDYTWAFDDIIVFAFSCKVAEIQMYICNRKRYGYLPVPLKAQQSLQEDIETFVH
VLIERMINHPPIEPSSNVSTPVKHLDKMGFDEIFMINLKRRTDRRQRMLHTLYEQDIEVK
VVDAVDGKALNTSHLKALNIEMLPGYHDPYSGRILTRGEIGCFLSHYYIWKEVIDRGLQT
VLVLEDDNRFQPHFRRRMTKLMEDIEENQLDWDLIYVGRKRMQVDHPEKSVPGIRNLVEA
DYSYWTLAYVLSQQGAKKLVAAEPFGKMLPVDEFLPIMYNKHPVEDYMKFYEPRDLKAFS
VEPLLIYPTHYTGEPGYVSDTETSIIWDNDEIQTDWNRNLSRKTREQGEIGAEAQNTEAL
QPQTPIGTASRDEL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtgcacacatctccccatgtctctcctctgcctgctggtcttagcgggcacg
attgcaggcgatggggctcattttccagaggagatcgagcgggaggagtcggccttgcag
aggccgaaggtcttgctggccatcattgcccggaacgcggcgcacacactgccccactac
ttgggttgcatcgagagactggactacccaaaggacagaatcgctctctgggttgccaca
gaccataacattgacaacacgacagcaatcctgcgggaatggctgaagaatgttcagaag
gcctatcactacgtggagtggagaccactggataatcccaagtactattctgatgaaata
gggccaaaacactggagcaattccaggttctcacatgtgatgaaactcaggcaaacggca
ctgaaaactgcgagggagaagtgggctgactacatcttgtttgtagatacagacaacttg
ctaaccaatgagcagacactgaatctgatgatagctgaaaacttgactgtggttgctccc
atgctggactctaacacattgtactcaaacttttggtgcgggatgacaccccagggatac
tacagacggactcctgattatgttccaatccgagaatggaagcataagggttgttatcct
gttcctatggtgcattccaccttcctcattgatctgcgtagggaggctacgaaaaagctg
gcattctaccctccacaccccgactacacctgggcattcgatgacatcattgtctttgca
ttttcctgcaaagtagctgagatccagatgtacatttgcaacagaaaacgttatggctac
ctcccagtgcccctaaaggcccagcagtccttacaagaggatattgaaacctttgttcat
gttctcattgaaagaatgattaatcatcctcccatagagccttccagtaatgtttccaca
cctgtaaaacacctggacaagatgggatttgacgagatcttcatgataaatctcaagcgc
agaacggacagaagacaacgaatgctacacacactttatgaacaggacattgaagtcaaa
gtggtggatgctgtggatgggaaagccctcaacacaagccatctgaaagctcttaacatt
gaaatgttaccagggtatcatgacccttactcaggaagaatactgacacggggagagata
ggctgcttcctgagccattattatatctggaaagaggtcattgaccgagggttgcagacc
gtccttgtcctggaggatgacaataggtttcagccacattttcgaagaaggatgacaaag
ctaatggaagatattgaggagaaccagctggactgggacctgatctacgttggtcgaaag
cggatgcaagtggaccatccagaaaagtcggtgcctggcattaggaaccttgtagaagca
gattattcctactggacactggcctacgttttatctcagcagggggccaagaagctggtg
gcagctgaaccttttgggaagatgttgccggtggacgaatttctacccatcatgtacaat
aaacatccggtggaagattatatgaagttctatgaacctcgggatttaaaagccttttca
gtggagccattgctgatttacccgacgcattacactggggaaccaggctatgttagtgat
accgaaacctccataatctgggacaatgatgaaatacaaacggactggaaccgcaactta
tccagaaaaactagggaacagggagagattggggccgaagctcagaatacagaggcactg
caaccccaaacgcccattggcacagcttctcgagatgaattatga
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