Chiloscyllium plagiosum (whitespotted bambooshark): 122554615
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Entry
122554615 CDS
T08871
Name
(RefSeq) retinoic acid receptor RXR-gamma-A-like isoform X1
KO
K08526
retinoid X receptor gamma
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03320
PPAR signaling pathway
cpla04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
122554615
03320 PPAR signaling pathway
122554615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122554615
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cpla03310
]
122554615
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
122554615
Nuclear receptors [BR:
cpla03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
122554615
SSDB
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GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
122554615
NCBI-ProteinID:
XP_043555860
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All DBs
Position
11
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AA seq
465 aa
AA seq
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MYGHYHHFMKLPVTYNHSAIQVNSTSMNSPSPHSTVNSMVGHHSMIGSSANASRSLTSSM
GSLASPVNGLGSPYPVITSSIGSPSVTLPSTPGISYGALSNPQINAVNNVSSTEDIKPPP
GLSGLGNMNCYSPNSIAKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDT
KDCIIDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKERSDNELEPSSSINDDMPVEK
ILEAELAVEPKTETYVDASPGNSSNDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQ
VILLRAGWNELLIASFSHRSISVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKM
KDMQMDKTELGCLRAIVLFNPDAKGLSNPGEVESLREKVYASLEAFTKHKYPDQPGRFAK
LLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtacggtcactaccaccacttcatgaaactccctgtcacctataaccactctgcgatc
caagtgaactccacatcgatgaattccccttccccgcactctacagtgaactcgatggtt
ggccatcattcgatgatcggttcctcagcgaatgcttcacgctctctcacctcctccatg
gggagcttggcttccccagtgaatggattagggtctccgtatccagtcatcacctcgtca
ataggctccccctcggtgaccctgccatcaactccaggcatcagctacggagcactcagc
aacccccagatcaatgcagtcaacaacgtcagtagtacagaggatattaagccaccacct
ggcctcagcggacttggaaacatgaactgttacagccccaactcaatcgctaaacacatc
tgtgcgatatgtggagatcgatcctcagggaaacattacggggtatacagctgtgagggc
tgcaaaggcttcttcaaacggaccgtgcgcaaggacctcacctacacttgtcgtgacacc
aaggattgcatcatcgacaaacgccaacgcaatcgctgccagtactgtcgctaccagaaa
tgtctggccacgggcatgaagagggaagctgttcaagaggagaggcaacgggggaaggag
cgaagtgacaatgagctggaacccagcagcagcatcaatgacgacatgccagtggagaaa
attctagaagcagaactagctgtggaaccaaagacagagacatacgtggatgccagtcca
ggaaattcgtccaacgacccagtcaccaacatttgccaggcagcggataaacagctcttc
acactggtcgaatgggccaagaggattccacatttctccgacctgcccctcgacgatcaa
gtcattctcctccgggcaggctggaacgagctactcattgcttcattctcacatcgatcg
atctcagtgaaggacggcatcctcctggccacaggactgcacgttcatcggagcagtgct
cacagtgcgggtgtgggctctatattcgacagagttctgacggaattagtctcaaaaatg
aaagatatgcaaatggacaagactgagttggggtgtctgagagccattgttctcttcaat
ccagatgcaaaaggtttatcaaacccaggagaagtggaatctctgagagaaaaggtttat
gcatcactagaagcttttacaaagcataaatatcctgaccagcctggccggtttgcgaag
ctgctcctacgactcccggcccttcgatcgatcgggctcaagtgtctcgagcacctcttc
ttcttcaagttgattggagacacccccatcgacaccttcctcatggaaatgctggaggcc
cctcaccaaatgacatga
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