Chiloscyllium plagiosum (whitespotted bambooshark): 122554633
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Entry
122554633 CDS
T08871
Symbol
gtpbp3
Name
(RefSeq) tRNA modification GTPase GTPBP3, mitochondrial
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpla03016
]
122554633 (gtpbp3)
Transfer RNA biogenesis [BR:
cpla03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
122554633 (gtpbp3)
Prokaryotic type
Methyltransferases
122554633 (gtpbp3)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
ADH_zinc_N
MMR_HSR1
ADH_N
ADH_zinc_N_2
FeoB_N
RsgA_GTPase
GTP_EFTU
Dynamin_N
cobW
Arf
MMR_HSR1_Xtn
ABC_tran
MCM
AAA_35
Motif
Other DBs
NCBI-GeneID:
122554633
NCBI-ProteinID:
XP_043555890
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Position
11:83647777..83691335
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AA seq
838 aa
AA seq
DB search
MSCSIPHRILRDVVRRNCLARKITGLAATYMSSAKDSGLSYQAAVCTELKKPLVIQKLSL
LPLKSAEVRVDVHYCGVNFADFLVCRGLYQEQPPIPFTPGLEFTGSVLEVGPNVTAIRKG
DRVIGVSYFGAMAEQCVVDHTMLWPIGEEVPYEVAATLPVSYGTVILALQHRAKTRPGET
VLVTAAAGAAGLAAVDFASHILNTKVIAAAGTDEKCELAVQKGAVASINYTTKNLKEEVK
RLTANKGVNVVFDAVGGDIFKDAFSSLAWEGRIVVVGFAGGNIPSVPANLLLLKNVAAMG
VNWGRYKHEDFPTFSKSIMSAVQYCQEGRIKPWVGAVYKLQQCNFRASFVRTQCSDARER
STIFAMSSGQSRCAVAVIRVSGPASSKTLIRLTGQRALPPARAAALRPLLDPGTGERLDM
ALVLWFPGPRSYTGEDCCELHVHGGPAVLSGVLQALACSPGLRPAEAGEFTKRAFLNGKL
DLTEVEGLGDLIHAETEAQRRQALRQMSGDLGHLYHGWSERLTRCLAHAEAYIDFSEDDN
IEEGILDQVDSDVRALQSEIDLHLHDSRRGERLRDGVHVAIVGPPNAGKSSLLNRICQKP
AAIVSPTAGTTRDVVEMALNLGGYPILLSDTAGLRETCDPVEREGVRRARERLWQADVAV
LVLDATELLSERRTNAVLPFLGDHLSRVTVDGSDEHQAEASSALADSIVVCNKTDLIQLE
ERDKLHLVLEEQGLHQVCLLSCKTGSGFDDFLCLLGEQVEKMCGNPLAGSPSLTQARHRL
HLHNCAQALTEYHHYRELDLVLATEQLRVALRQLGKITGKIGAEEILEVIFRDFCIGK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgctcaatcccgcaccgtatcctgcgggatgtagtcaggaggaattgtttagca
aggaaaataactggactggcagcaacttatatgagcagtgccaaagactctggcctttcg
taccaagcagcagtgtgcactgagctgaagaaaccattggtgatccagaagctgtcttta
cttccactcaaatccgctgaagtgcgtgtggatgttcattactgcggtgtgaactttgct
gattttctggtatgccggggactgtatcaagagcaacctccgattcccttcactccagga
ctggagtttacaggatctgtgctggaggttggtcctaatgtcacagcaattcgcaaggga
gaccgtgtgattggtgtgagttactttggggcaatggcagaacagtgcgttgttgaccac
acgatgctgtggcccattggagaggaggtcccctacgaggtggctgctaccttaccggtt
tcatatggcacggtgattctggcattgcagcaccgagcaaagacaaggccaggggagaca
gttcttgttacggcagccgctggtgcagctggacttgcagctgtggattttgcatcccat
attctaaacactaaggtcatagcagctgctgggacagatgagaagtgtgaactagcagtg
cagaagggtgctgtggcaagcatcaattatactacaaagaacttgaaggaagaggtgaaa
aggctgactgcaaacaaaggggtgaacgtggtcttcgatgctgttggaggagatatattc
aaggatgccttcagcagcttagcatgggaaggcagaatcgtggttgtcgggtttgctggt
ggaaatataccgtctgtgccagccaatcttctgcttctgaagaacgtggcagccatgggc
gttaattggggaagatacaaacatgaagatttcccaaccttctctaagtccatcatgtct
gcagtccaatactgtcaggaagggaggatcaaaccttgggttggagctgtttataaactg
caacagtgcaattttcgggccagctttgtgaggacgcagtgctcagacgcccgagagaga
agcaccatttttgccatgagctcaggtcaaagcaggtgcgcggtcgctgtcatccgagtg
agtggtcccgccagcagcaagacgctgatacgcctgaccggtcagagagctcttccgccg
gccagagccgctgccctccggccgctgctggaccccgggacgggggagcgtctggacatg
gcgttggtgctgtggttcccgggcccgcgcagttatactggcgaggattgctgcgagctc
cacgtccacggggggccagcggtgctcagcggagttctccaagccctggcatgctcacct
gggctgcggccggcggaggcaggcgagttcaccaaacgtgccttcctgaatgggaagctg
gacctgactgaggtcgaggggctcggagacctcattcatgccgagaccgaagcccagagg
aggcaggctctgcggcagatgtccggtgatctggggcacctgtaccatggatggagtgag
aggttaactcggtgcctggcccatgcagaggcttacattgatttcagcgaagatgacaac
atcgaggagggaatactcgaccaggttgatagcgatgtgcgcgctctgcagagtgagatc
gacctgcacctccacgacagccggcgtggtgagaggttgcgggacggagtccatgtagca
attgttgggccaccgaatgcaggaaaaagcagccttctgaaccgcatctgccagaaacca
gccgccatcgtctcgccgacagcagggacgacgcgggatgtggtagagatggccctgaat
ctcggagggtaccccattctcctgagtgacactgcgggactccgagagacatgtgacccc
gtggagcgggagggagtgaggcgtgcccgggaaaggctttggcaggccgatgtggcggtc
cttgtgctggatgccacggagctcctgtcagagcggcggactaatgcggtgctgcctttc
ctcggagatcatctgagcagagtaaccgtggatggatctgacgagcatcaagctgaagcc
agctcagcattggcggactcgattgtggtctgtaataagacagatctcattcaactggag
gagcgagacaagctgcacttggttctcgaagaacaagggctccatcaggtgtgcctgctg
tcctgcaagaccggcagtggttttgacgacttcttgtgcctcctgggagaacaagttgaa
aaaatgtgtgggaatccgttggccggcagccccagtttaactcaggcacgtcaccggctg
cacctccacaactgtgcccaggcactaacagagtatcaccattaccgagaactggatctc
gtccttgccacagagcagctgagagtagccttgagacaactaggaaagatcactgggaag
attggagctgaagaaatcctggaagtcatattcagggatttttgcattggaaaataa
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