Chiloscyllium plagiosum (whitespotted bambooshark): 122554658
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Entry
122554658 CDS
T08871
Name
(RefSeq) dysferlin-like
KO
K18261
dysferlin
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122554658
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpla04147
]
122554658
Membrane trafficking [BR:
cpla04131
]
Endosome - Lysosome transport
Others
Ferlins
122554658
Exosome [BR:
cpla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122554658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
Ferlin_C
Pex24p
PTEN_C2
Motif
Other DBs
NCBI-GeneID:
122554658
NCBI-ProteinID:
XP_043556283
LinkDB
All DBs
Position
1:4807279..5090483
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AA seq
1572 aa
AA seq
DB search
MEPSSHGVIESSSHRVIEPLSHRVIEMDRLTHNDVIGTTYLCMSKISAPGGEIEEICSME
FEPISGLDDGLGYLPSFGPCFMNLYGSPREFTGFPDPYVDMNLGKSEAMAYRGRVLVELS
TKLVDQAEQKIEEIPSDDLLRVEKHLRRRKFHLCAVFYSATMLQEVGDAIQFEVSIGNYG
NKFDATCLPLASTTQYSRAVFDGCHYYFLPWGNVKPVVVLSSYWEDISYRIDALNILLNA
VDRLVSVDGSDGGNGQSRGNTKSGTEVSGAMVIVGWGNGACAVPWTMLLWTRNGADGTMG
GQRQALELDSTEREMASEILLPSACPMMGPSNPLRHSLVPRYKSSKVNRYFDVQDCLNVL
VFLRAFSLEKETYENQTKLALVGNWGTTGLTYPKYSDVTGKIKLPKDSFRPSAGWAWAGD
WFISPEKTLLYDVDAGHMTFVEEVFENQARLPGGQWIQMTEAYTDINGEKMLPKDDIECP
IGWKWEDVEWSTDLNRAVDEQGWEYGFTIPPDRKPKSWAPAEKMYHTNRRRRWVRMRRRD
LQQMDALRKTKAEDLEMEGWEYASLFGWKFHLKQRKTDTFRRRRWRRRMEPLEKAGPSAV
FALEGALGGVTDDKNEEKSMSSLNLGVNTPTVSCIFDYGTRYHLRCYLYQARDLIAMDKD
SFSDPYAIVSFLHQSQATVTMKGTLNPTWDQTLIFHEVEIFSDSSITTNNPPNIVVELYD
HDTYGADEFMGRCICRPWLEPSPRLAWYPVRRGNRNAGELLAAFELIPREKEDDTDLPYP
PPQREPNIYMVPQGIKPILQRTAIEVLAWGLRNLKSYQLASVSSPSLIVECGGQMVQSSV
IKNAKKNPNFSTSVLFMEVCLPKEELYCPPITVKVIDNRQFGRRPVVGQCTIRSLADFYC
DPYTERRDSAAALQSDERSPSFRDDVLIDIDDRQPLIASQFAGCMTSSTLNKFPSMSSLH
IQETMWEDEFVDWWSKFYASMGDTSKCGTYLEKGLDTLQVYNVELEKVEAFEGLTDFCRT
FPLHRGKTQGEDEDPSVVGEFKGSFKIYALPDDPSVPNPPQQFHQLPASGLQECLVRVYV
IQAFGLQPKDSNGKCDPYVKVSLGKRSVSDQDNYIPCTLDPEFGRMYELTGNLPIDKDLK
VTLYDYDLLSKDEKIGETVIDLENRFLSRFGARCGLPQTYSISGPNRWRDQLRPSQLLHI
YAQRQGYKLPVITDSKITIAGEEFLLADFEDGKPLGTHLGPPDERLALYVLHKQGLVPEH
VETRALFSPLQPDIEQGKIQLWVDIFPKSLGPPGPPFNITPRKAKRFYLRCIIWNTNDVI
LDDLSITGEKMSDIYVKGWLVGYEGNKQKTDVHYRSMGGEGNFNWRFIFPFEYLPTEQVC
SIAKKEHFWSLDKTQTKIAPQLILQIWDNDKFSFDDYLGSIQMDLNRMPKPAKSPEKCGL
MVLESEKHVSLFEQKSVKGWWPCVAESHGEKILAGKVEMTLEIVTEEEKEERPAGQGRDE
PNMNPKLEQPKRPDTSFLWFTSPLKTLKYIVWRKFRWVILAFLVFLILILFVVIFLYSFP
EYAAMKLVKPFS
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atggagccatcgagtcatggagtcatcgagtcatcgagtcatcgggtcatcgagccattg
agtcatcgagtcatcgagatggatcgcttaacccacaatgatgtgattggtacaacttac
ttatgtatgtcgaaaatctctgccccaggaggagagattgaagagatttgctcaatggag
tttgaacccatcagcggcttggatgacggcctgggatacctcccgtcctttggaccctgc
tttatgaacctgtacggcagtcccagagagttcaccggctttcccgatccgtacgttgac
atgaacctgggaaagagtgaggcgatggcctaccgtggccgagtcctggtggagctcagc
accaaactggtggaccaggcagagcagaagattgaggaaatcccatcagatgacctctta
agagtcgagaaacacctccgtcgccgtaagttccacctgtgtgccgtcttctactctgcc
accatgcttcaggaagtaggcgatgccatccagtttgaggtcagcatcggtaactacggc
aacaagttcgatgccacctgtctgcccttggcctccaccacccagtacagccgggcagtg
ttcgatggttgccattattacttcctgccctggggaaacgtgaagccagttgtggtcctg
tcatcatactgggaggatatcagctacaggatcgatgcactgaacatcctgcttaacgct
gtggatagacttgtgagtgttgatgggagtgacggaggcaatggacaaagtcgagggaat
acaaagagtggcacagaggtttctggggcgatggttattgtgggatggggcaatggtgcc
tgtgctgtgccctggaccatgctgttatggactcgcaatggtgctgatgggacaatggga
ggtcagcgacaggcgctggagcttgactcaaccgagagggaaatggcatcagaaatcttg
ctcccatccgcatgccccatgatgggacccagcaatcccctcaggcactcactcgtcccc
cgatacaaatcttctaaggtcaatcgatatttcgatgttcaggactgtctgaatgtactg
gtcttcctacgtgccttcagtttggagaaggagacatacgaaaaccagaccaagttggcc
ctggtcgggaattggggcacaacgggcctcacctatcccaaatactccgacgtcaccggg
aagatcaagctccccaaggattccttccggccgtcggcaggctgggcttgggcaggagac
tggttcatctctcctgagaaaacgttgctgtacgatgtggatgctggtcacatgaccttc
gttgaggaagtgtttgaaaatcaggcccggttgccagggggacagtggatccaaatgact
gaggcctacactgacataaatggagagaaaatgttaccaaaggatgatatcgagtgtccc
attggctggaaatgggaagatgtggaatggtccactgaccttaaccgagctgtggatgaa
caaggctgggagtatggattcaccatcccacccgatcggaaacccaagtcctgggcccca
gcggagaagatgtaccacacaaacagacgacgccgttgggtccgaatgcgcaggagggac
cttcaacagatggacgcactccgcaagaccaaggctgaagatttggagatggaaggctgg
gagtatgcctctctctttggttggaaattccacctgaaacagaggaagacggataccttc
cgacgtcggagatggagacgccgcatggagcccctggagaaggctggaccttccgcagtc
ttcgctctggaaggtgcactgggcggtgtcactgatgacaagaatgaggagaaatcaatg
tcatccctcaacctgggtgtgaatacacccaccgtctcctgtatatttgactatggaacc
agatatcatcttcggtgctacctttatcaagccagggatctgattgcaatggacaaggac
agcttctctgacccatacgccattgtctcattcctgcaccaaagccaagcgactgtgaca
atgaaaggcaccttgaaccccacctgggaccagacgctcatcttccatgaagtggagatt
ttcagcgattccagcatcaccaccaataaccctcctaacattgtggttgagttgtatgac
cacgacacctatggggctgatgagtttatggggcgatgtatctgcagaccatggcttgaa
ccctccccaagattggcgtggtatccagtgagaagaggcaacagaaatgcaggggaactc
ctggctgccttcgagctcattccacgggagaaggaggatgatacagacctgccttaccca
cccccacagcgggaacccaatatctacatggtgcctcaggggattaaacccattctgcaa
cgtactgccattgaggttctagcctggggtctgaggaacctgaagagctaccaactagcg
agcgtgtcttctcccagcctcatcgtggaatgtggaggtcagatggtgcagtcctcagtc
attaaaaatgccaagaagaatccaaacttcagcacttcagtcctgttcatggaggtgtgt
ttaccaaaagaggagctgtactgtccacccatcactgtcaaggtgattgataacaggcag
tttggaagacgacctgttgtaggacagtgcaccatcaggtccttggcagatttctactgt
gatccttacacggagaggagggactctgctgctgctctgcagtctgatgaacgaagtccc
tcattccgggatgatgtgctgattgatatcgatgacaggcaacctctgatcgcaagccag
tttgcaggctgcatgaccagctcaaccttgaataagttcccttctatgtccagcctccat
attcaggagaccatgtgggaagacgagtttgtggattggtggagtaagttctacgcatca
atgggtgacaccagcaaatgtggaacgtacctggagaaaggcttggacacgcttcaggtc
tacaatgtcgagctggagaaggtcgaggcgttcgaagggttaacagatttctgccgtacc
ttccctctgcatcgtgggaagactcagggtgaagatgaggatccttcagtggtgggagaa
ttcaagggcagcttcaagatctatgcccttcctgacgacccctcagtgcctaaccctcct
cagcaattccaccaactgccagccagcggactccaggagtgtctcgtcagggtttatgtc
atccaggcctttggacttcagccgaaggactccaatggaaagtgtgacccgtacgtgaag
gtttctctgggcaagaggtccgtcagtgaccaggacaactacatcccatgcaccctggat
cctgagtttggaaggatgtatgagttgactggaaacctgcccattgacaaggacctgaag
gtcaccctgtatgactatgatctcttgtcaaaggatgagaaaatcggcgaaactgtgatt
gacttggagaatcgcttcctctctcgattcggagctcgctgtgggttacctcaaacctac
tccatctcaggaccaaaccgatggcgtgaccagctcagaccaagccagctccttcacatc
tacgcacagaggcaaggctacaagctccctgtgatcacggacagtaagatcacaattgca
ggagaggagttccttctggcagatttcgaggatgggaagcccctcggcacacacctcgga
ccccccgatgagcgcctggctttgtacgtgcttcacaaacagggcctggttccagagcac
gtggagacgcgggctttattcagcccactgcagcctgacattgagcagggaaagatccaa
ctttgggtggacatctttcccaagtcacttggacccccaggacctccattcaacatcacc
cctcgcaaagcgaaacggttttacctgcgatgtatcatatggaacaccaacgatgtaatc
ttagatgacctcagtataacaggagagaagatgagtgatatatatgtgaaaggctggctt
gtgggctatgagggcaacaaacagaaaacagacgtccattacaggtcgatgggtggagaa
ggaaacttcaactggcgattcatcttcccgtttgagtatttgccaaccgaacaagtctgc
tccattgccaagaaggaacatttctggagtctggataagacgcaaacaaaaattgcacct
caactcatcctccagatctgggacaacgataaattctccttcgatgactatctggggtcg
attcagatggatctcaacaggatgccaaaaccggccaagtctcccgagaagtgcggtctg
atggtgctggagagtgagaaacatgtctctctgtttgagcagaaatcggtgaagggttgg
tggccctgtgttgctgagtcacatggagagaagatccttgctggcaaagtggagatgacc
ctggagatcgtgacggaggaggagaaggaggaacgtcctgctgggcagggccgggatgag
cccaatatgaacccgaaactggagcaaccaaagcgaccagacacctccttcctctggttc
acctcccccttgaagaccctgaagtacatcgtctggaggaagttccggtgggtgatcctg
gcgtttttggtgttccttatcctgattctgtttgtcgtcatcttcctttactccttcccg
gaatatgctgctatgaagttggtgaaacctttcagctga
DBGET
integrated database retrieval system
