Chiloscyllium plagiosum (whitespotted bambooshark): 122554678
Help
Entry
122554678 CDS
T08871
Symbol
trim2a
Name
(RefSeq) tripartite motif-containing protein 2 isoform X1
KO
K11997
tripartite motif-containing protein 2/3
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122554678 (trim2a)
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122554678 (trim2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
SGL
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
TEN_NHL
zf-RING_2
RING_XB3-XBAT31
Prok-RING_4
zf-ANAPC11
Mala_s_1-like
CENP-F_leu_zip
MG2
PI3K_P85_iSH2
Invasin_D3
zf-C3HC4_4
ChuX_HutX
PAF-AH_p_II
MitMem_reg
CCDC84
Motif
Other DBs
NCBI-GeneID:
122554678
NCBI-ProteinID:
XP_043555992
LinkDB
All DBs
Position
1
Genome browser
AA seq
751 aa
AA seq
DB search
MASDSSTITSPVVRQIDKQFLICSICLDRYKVPKVLPCLHTFCERCLQNYIPAYSLTLSC
PICRQTSILPEKGVSALQNNFFITNLMDVLQRTPDNSCEDSSILETITAVAAGKPLSCPN
HDGNVMEFYCQSCETAMCHECTEGEHAEHPTVPLKDVVEQHKSSLQTQLEAVKQRLPELD
SALSFLSEILQDLTNEKVSIEEEIHATFDELQKTLNVRKSVLLMELEVTYGVKQKVLQAQ
LDALLQGQESIRSSCNFTEQALNHGTETEVLLVKKQMGDRLNELAVQEFPLQPQENDQLE
FVVETEGLKKSIHNLGTIITTNAVAYETVATGEGLRQCVIGHPTSVTITTKDKDGELVKT
GNACLSAEIASPDGSVVDGEILDNKNGTYDFLYTIQKEQKEGDFTLTLRLYDQHIKGSPF
KLRVVKPTDLSPTSDGVKRRVKSPGSGHVKQKAVKRPASMYSTGKRKENPIEDDLIFRVG
TKGRNKGEFTNLQGVATSTSGKIMIADSNNQCVQIFSNDGQFKNRFGVRGRSPGQLQRPT
GVAVHPSGDIIIADYDNKWVSIFSPDGKFKTKLGSGKLLGPKGVAVDRNGHIIVVDNKAC
CVFIFQPNGKLVTKFGNRGNSDKQFAGTLDGPHFAAVNNNNEIIVTDFHNHSVKVFNTDG
EFVLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPL
YGPQGLALTSDGHVVVADSGNHCFKVYRYLQ
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgacagctcgaccattaccagtcctgtggtacgtcagatcgacaaacagttt
ctgatctgcagcatctgtctggatcgttacaaagttcctaaagttcttccctgccttcac
accttttgtgagaggtgtctacaaaactacattcctgcctacagtttaactctttcctgc
ccaatctgccgtcagacttctatcttgcctgaaaagggtgtttctgcgctacagaacaac
tttttcattacaaacctaatggatgttcttcagcggactccagacaacagctgtgaggac
tcctccatcctagagacgatcacagcagtagcagcagggaaacccctttcctgtccaaat
cacgatggaaatgtaatggagttttactgccaatcctgtgagacagcaatgtgtcacgaa
tgtacagaaggtgaacatgctgagcacccaactgttcccctcaaggatgtagttgagcag
cacaagtcctccctgcagactcaactggaggctgtcaaacagaggttgcctgaattggac
tctgctcttagtttcctgtctgaaatcttgcaggatttgaccaatgagaaagtaagcatt
gaagaagagatccatgctacattcgatgagctccaaaagactttaaatgtacgaaagagt
gttctgcttatggaactggaggtcacatatggtgttaaacaaaaagttctccaagcacaa
ttggatgcactactgcaaggtcaagagagcattagaagcagttgcaacttcacggaacaa
gctctaaaccatgggaccgaaacggaagtgcttttagtgaagaagcaaatgggtgatagg
ttgaacgaattagctgttcaagagtttcctttacagccccaagaaaatgatcagctggag
tttgtggtggaaactgaaggactgaagaaatccattcataatttaggtaccataatcacc
acaaatgccgtggcctatgagactgttgcgacgggtgagggattgagacaatgtgtgatt
ggccatcccacatctgttactataacaacaaaggataaagatggagaacttgtgaaaact
ggaaatgcgtgtctaagtgctgaaattgcatctcctgatggtagtgttgttgatggggaa
atacttgacaataaaaatggcacctatgacttcctttataccattcagaaagagcaaaag
gagggtgactttacacttaccctccgactatacgatcagcatattaaaggaagtccattt
aaattgagggttgtcaaacccactgatctgtctccaacatctgatggagtcaaacgtcgt
gtgaagtcacctggtagtggacatgtaaaacaaaaggctgtgaaacggccagccagcatg
tatagcactggaaaaagaaaagagaatccgattgaagatgacttgatctttagagttggt
actaagggaagaaataaaggggaattcactaacttgcagggagtggcaacatccaccagt
ggaaagatcatgatcgcagacagtaacaatcaatgtgtacagattttctcaaatgacgga
caatttaaaaaccggtttggtgttcgtggccgctctcctgggcagctgcagcgtccaacg
ggagtagctgtacacccaagtggggacattatcattgctgattatgataacaagtgggtg
agcattttttcaccggatgggaaattcaagaccaagctaggctctgggaagcttttggga
ccaaagggtgttgcagtggatcggaatggtcatataattgtggtggacaacaaggcttgc
tgcgtctttattttccagcctaatgggaagctggtgacaaaatttggtaatcgaggaaac
agtgacaagcagtttgcaggtacacttgatgggcctcatttcgcagcagtcaacaacaat
aatgaaatcattgttacagattttcataaccattctgttaaggtatttaacacagatggt
gagtttgtattaaagtttggatctaatggagaaggaaatggccagtttaatgctccgaca
ggagtggcagtggattccaatggaaatattatagttgctgactggggaaatagccgtata
caggtgtttgatggaagtggatcgtttctgtcttatattaacacttcagctgatcctctt
tatggacctcaaggtttagcattgacctcagatggtcatgtagtagtagctgactctgga
aatcattgctttaaagtttatcgctatttgcagtaa
DBGET
integrated database retrieval system
