Chiloscyllium plagiosum (whitespotted bambooshark): 122554730
Help
Entry
122554730 CDS
T08871
Symbol
efcab7
Name
(RefSeq) EF-hand calcium-binding domain-containing protein 7
KO
K23852
EF-hand calcium-binding domain-containing protein 7
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
122554730 (efcab7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpla03037
]
122554730 (efcab7)
Cilium and associated proteins [BR:
cpla03037
]
Primary cilia and associated proteins
EVC complex
122554730 (efcab7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
EH
SPARC_Ca_bdg
EFhand_Ca_insen
AIF-1
EF_assoc_2
Motif
Other DBs
NCBI-GeneID:
122554730
NCBI-ProteinID:
XP_043556042
LinkDB
All DBs
Position
11:complement(58834283..58931951)
Genome browser
AA seq
650 aa
AA seq
DB search
MSACSIIILLSVFSLGVINGNNIPARMSIQQGSITATSSVPRQAESGRSQCTEDEIFYRN
CRAAYLTVFRTSLENITSKDQLCLVLQQAGRNPSGKTLEKYWTQHTKKLNFDDFCEILKN
EKCTGKSELLKAFKKLDLNSDGYLTHEELYKVLTTNGERMTHEELKMIMDEADINKDGKL
DYTEFCKLFLATVETSQKTAVARLETMTKMKQQQFGSSTVASLELSSSPSSKSLLATSQN
PETDLIPKVDSRLPSRTSSARSRRASISSTITMGPITTKGLKLTEPKAMKNWQHTWSKGC
FFLEEDGGIVSHRYRLELHQTTNVCLTIRPLNLSESEEKQSSWMNVDTSLFVLRNNGDSE
VLEVVCVTELREKEKFGWKGELRSGVYHLLPFTTGCRLRKRRKSKTREAKLVHREDGNLA
LTKEFRAALSDIFEIIDLDGNGLLSFDEYNFFEFRTSGEKCDREAWVVCQENFDTKKNEL
TRQGFMDLNLMEANDREGDPKDLWVTLESMGYSKTLEMHEACPFVISIYAEDSKLKLTPI
SLEAGGNLLNSVICKSVISKGEAKAMKNYSNLVIHIYKTETRITSVIENKSETRVIVHVN
NEQSKNSVSSRGLSIFAVEVAPKTTTVCQHVMPINEKLEWIYSCTESIVT
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatgcagcattataattttattatcagtgtttagtcttggtgtcattaatggc
aataatattcctgccagaatgtccattcagcaaggaagcatcacagctacttcatctgtg
cccaggcaagctgaatctggcagatctcagtgcaccgaagacgagatattttacagaaac
tgtagagcagcttacctgaccgtatttcgaaccagtttagagaatatcacttccaaagat
caactctgtctggttctccagcaggctggaagaaatccttccgggaagacgcttgagaag
tactggactcagcataccaagaaattaaactttgatgacttttgcgagattttgaaaaat
gaaaaatgtacaggcaagagtgaattgttgaaagctttcaagaagcttgatttaaatagt
gatggctaccttacacatgaggagctttacaaagttctcactactaatggcgagaggatg
acacatgaagaattgaaaatgatcatggatgaagctgatattaataaggatggaaaatta
gattatactgagttttgtaaattattcctggcaacagttgaaacaagtcagaagactgca
gttgcaagattagagactatgaccaaaatgaagcaacaacagtttggaagttcgacagtc
gcttcattggaactttcttcctcaccttcatcaaaatcactgctggcaacttctcaaaat
cctgagacagatttaatccccaaagttgatagcagacttccatcaagaacgtcatctgct
cgaagtcgcagggcttcaatttcttctaccatcactatgggaccgatcactacaaaaggt
ctgaaattaactgagcccaaagcaatgaagaactggcaacatacttggtcaaagggatgc
tttttcctggaggaagatggtggaattgtcagtcatcggtatagactggaattacatcaa
acaacaaatgtttgccttaccatcagaccattaaacctcagcgaaagtgaagaaaagcaa
tcctcctggatgaatgtggacacctcattatttgttttgaggaacaatggtgattcggaa
gttctggaagttgtatgtgtcacagaattacgagaaaaagagaagtttggttggaaggga
gaacttcgttctggagtttatcaccttctcccatttaccactggctgcagactaagaaaa
aggaggaaatcaaagacacgtgaagctaagctggtccacagagaagatggcaacctagca
ctcaccaaggaattcagggctgctctgtcagacatctttgaaatcatcgatttagatggc
aatggcctactgagctttgacgaatataatttctttgagttcaggaccagtggagagaaa
tgtgatagagaagcctgggttgtgtgccaagaaaattttgacacaaagaaaaatgagctg
acacgacagggattcatggacttgaatttgatggaagcgaatgatcgggagggtgatcca
aaagacctttgggtgacacttgaatcaatgggctacagcaaaacattagaaatgcatgag
gcatgtccttttgtaattagtatctatgcagaggacagcaaacttaagttaacacctatc
agtctggaagcgggtggaaaccttctcaattcagttatctgcaaatctgtcataagtaaa
ggagaagcaaaagcaatgaagaattacagcaatttggtgattcatatctacaagacggaa
acacgaatcacttcagtcattgaaaataaatctgaaacaagagtgattgttcatgtcaac
aatgaacagagtaagaactctgtcagcagtcgggggcttagtatctttgcagttgaagta
gcaccaaagacaactacagtctgccagcatgtaatgcctatcaatgaaaaactggaatgg
atttacagctgcacagaaagcattgtgacctga
DBGET
integrated database retrieval system
