Chiloscyllium plagiosum (whitespotted bambooshark): 122554842
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Entry
122554842 CDS
T08871
Symbol
dchs2
Name
(RefSeq) protocadherin-23 isoform X1
KO
K16507
protocadherin-16/23
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
122554842 (dchs2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122554842 (dchs2)
Cell adhesion molecules [BR:
cpla04515
]
Cadherins
Cadherin related
122554842 (dchs2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Ig_CLSTN
Ig_Cad99C_N
Fibulin_C
PepSY
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
122554842
NCBI-ProteinID:
XP_043556127
LinkDB
All DBs
Position
1
Genome browser
AA seq
3271 aa
AA seq
DB search
MPKWDHPRENCLIACLMLLLGVCPVTLSNRLRLSVEEGQPPETVVGDISVALPSEASTGG
YFISEGEESVVLRDLKVDGVSGVIKTARVLDRETRDRYQFVAVTVSGHMVTVEITVTDIN
DHSPVFPRDTVQLNISELTPNGTRFRLEPAWDPDTGIFSVQSYAITAGNPGLFQLRPGNG
LTRVELVLGGLLDRENREYYSLTVQASDGGTPPRTGTMQLVVRVLDENDNPPRFERTEYE
AWVREDAVPGTRIIRLQASDPDQGTNGFVTYEIDRRRSGPSGRFAIESRSGEVRLRGPLD
RERRPRYQLVIRACDHGSPAGLGSAFLSVRLLDVNDNRPSISIVYLSPSGRAEVSEGAAP
GQPVARVSVGDPDLGEGGELRVWLHDDIEGPSGGGSFELRHTPLASIFLLSVNRRLDRER
RRAHHLTVLASDSARPPLTSRCSLQLHVADVNDNAPAFEREVYEAHVAEGPLPASIRAPL
LQVSARDPDAGANGTVRYAILAEGAPPVRVDPLTGWISAAACLDRESHEVIRLSVVARDL
GEPPLSSTVSVLLHVDDVNDNEPAFEQQLYTATVREHTEPGTCFLQVNARDADAGLFGTI
HYFLYDDVNNYEKSHLFTIDSSSGQICTTQNMDRDNGPPSYDLLVIAEDGGGLSAQSFIH
LDLQDINDNQPLFNPLTYVTSISSHTQPGTEITNVMASDRDSGVNGKVSYELLTGNFSSL
FSVDSSTGAVYLTSTFSHLQVSDVQLKISARDGGNLTSSLNATVTVHILQSSVAPTVFEQ
SSYSFTILESVPIGSAVGRVQVASIQDSLELKYRISSGDPNGYFSIESKSGLIRSNKQLD
HEAQPFVMLTIESQTSSSPVYSYVQVNITIIDVNDNAPAFHQESEIITISKNTLPGTVLY
IAHAEDKDSGLNGIIMYSLQNDYEQTFSIDYVHGTLYLNRTVFSKKKQYSIHILASDHGA
QPLSTVFMLLVNVDHLDGNLTFETLIYEVEVSEAAPFNMRILQVHAHMQDSKVASGLVYS
LQQNLDSLTFGIHAASGWIYIHKALDYEKKHSYSFKVFATNPKEHLKQSAIASVIVNVMD
ENDNPPLFTQNLYFFTIEESPIPQGLVGKVQATDQDSGKNSHLSFILLSDGKFFRLNSKT
GEIINWVALDREQHIHHQLSVLVTDHGVPRQNASTTIYITVSDINDNRPLFSYPGPSREF
FIKVLVAQPEGTFLTTLIAKDPDVGKNGTVSFSILENYSNSFKIDAKTGELRTAKVFMYN
YISHHKIVVMASDAGSPPLHQIAEINIQVIPRVIEKLTIHNNQRYFTIPEGLRPGNVVGS
ISSYDHHLLTSQRIHYYIDEDDDHFPFEVDRMTGELYQSNELDYEEIPHYLLKVIEEDNS
HILSRNISIFVSIKIEDQNDHSPWFKDDVVVIGIEENLPVGSLVHIFNAKDDDGSRPNSE
LRYSVMSWSSTENPFYIDPYQGCLNTTLPVDHEMTKTFLLTITAMDQALNVNERKVGSVT
AQIIVLDVNDNKPIFLSENVSYVMEDEEVGYLVHHIIAYDADAGESGRILYAIISGNEDN
TFKLDESSGLLTLVSHLDHEIQKSYTLTISGWDNGFPIQSSTQILMVVVVDINDEAPKFQ
DSVYEIGVPENLNVDAYVVKVEAFDGDSDLNSALIYEILPGSGYDAFKINPQTGIITTTQ
VLDREIQEYFVIKVLVRDSGTPSLSDTSTVMVTVLDENDHQPEFMPHLHELHISENMDPG
IIYALTALDKDAGKNGLVRYEIIGGNFTNTFKIDSVSGTLATIKGLDREEFNNCSLTIEA
HDLGNPQRTSQAEIWIIILDENDNSPVFKKMYYHIIVNEDVPVGSSVYQLIASDKDDGFN
GEIAYSLIDDTFGAFTINSNTGIIVTTNQLDRETKSQYAFRAMANDNSIQNPRSTTVNVM
ILIEDANDNFPIFKQNPIIAYITVNTQISQVIATVKADDKDLGQNGTVTFQILEHDSLFA
VNNTTGDIYPKTSPSERHFGRNNLSVVAVDQGNPVRLSTGLVLIHWQVEKGRTWFSRNIY
EITVAENIKPGTLVLTVTNQDYHTNGVTYSIFSGNENEAFHIDSKTGEIVVNDSKFLDYE
VRTKMHLVLLAKNNRQTAYSQLTILIEDVNDNQPHFQQNYYKTSIWEGQTRNTYVMQVFA
SDSDHGLNGQIEYSIISGNENKAFVIDSARGIITTNAVLDREVISSYRLVLQAADRGSPR
LSITAIVGIQVLDVNDNAPSIPPLKAVQIFENLQAGYVVTQILASDLDLNPVLSYNFTKN
GNPEGKFAIDCNTGAIILTEPLDYEKQSEYLVKIKISDSVHETEAALGVYVMDLNDNSPV
FSQESYQIVFPELSPVNTYILTVSATDKDTGVNGKVSYRILPGTSTEFYINAESGALFTR
RTVHYTSYNSVVQLLVEAKDDGNPALKSITSVEIRIQDINNHIPQFNQAVYNISVNEEAA
TGIILLLFSTLDQDWTRKNAYVDYIIIGGNEQNKFHIENTVIKRENQYSVVGKLLLKNVL
DRELTDSYHLVVCASDRGNPSLSSTTIVSITVLDFNDNPPVFNSLDYHIEVLESTPVKNQ
LIQVSAYDQDQGANADIRYNIISGNEKEYFRLDHKTGFVELKLPLDYEQVSKFMLTIQAI
DGSVTNQKMAISILYINVLDDNDNVPYFVFPTLNCAVNENEPIYTSVCAVHAFDNDDGAF
GYLTYSILTLPLTDYSMYTSWNNFIIDPVTGDIYTKQLIDYEQQKKCIFVVQAKDKGNAS
ATATIQVHIQSIDEYEPTFTQDRYYFTLPNLVEVGQKTGQVTAVDKDAGLDGIVQFSFLK
PSPYFSLNQTSGVIYVSGSIHNIRGSYKGEEVIDLVIKASSPLMGSKSAISTVAINISQS
LDALIGKSTDHLTLSLSVSFVIFLLLSVCCGGLVYRYKAKDKNNSSFGKQNIKLPIISTI
INHLNHPVVSSGHQKVNDKQRGKTPVNSPEQLSLVDIPVKTKSFSSSRQCIADGQTAEDR
EIMMFSANQHSRNQVPESSKPGWTYSVPDSEHTKESYCLSCQLCQNNTTDAVINRESVGS
IYNFKDIREEEGFNVDFIDDDVSRNIQNPSIKKNSVMMDNAKNHIFIMDGRTSLIESLNS
LVPIQDQIQNSYNYDYVLTWKPGFQPLASAFTEIAKLKDENVLKPVIKNESKSTLPPPLI
TSIAQQGIRVVPPQMPIVKFNPSTLKYSSLPVATNTYSSTSAITSNFSPSVSVQTPSAST
GLSSGIPELTLRQSSHKQKLEENTDVITLSN
NT seq
9816 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaatgggatcatcctcgggaaaactgcttaattgcatgcctcatgttacttttg
ggggtttgtccggttaccctgtcaaacagattgcgtttgtctgtagaggagggacaaccc
ccggagactgttgtgggggatatcagcgttgccttacccagtgaggcatcaactggtggc
tacttcatctcggaaggcgaagagtcggttgttctccgcgacctgaaagtggacggggtc
agcggggttataaagacagccagagtgctggaccgagagaccagggaccgctaccagttc
gtggcggtgaccgtgagcgggcacatggtgacggtggagatcacggtcacggacatcaat
gaccatagcccggtcttcccgagggatacggtgcagctcaacatctcggagctgaccccg
aacgggacacggtttcggctggagccagcctgggacccagacacgggcatcttcagcgtg
cagagctacgcgatcacggcggggaacccggggctctttcagctgcggcccggtaacgga
ctcacccgggtcgagctggtgctgggcggcctcttggaccgggagaacagggagtattac
tcactcactgtgcaggcttccgacgggggcactccgccgaggacgggcaccatgcagctg
gttgtccgagtgctggacgagaacgacaacccgccccgcttcgagcggaccgagtatgaa
gcgtgggtccgggaggacgcggtaccggggacccggattatccggctgcaggccagcgac
ccggaccagggcaccaacggcttcgtcacgtacgagatcgaccgcaggcgcagcgggccg
agcggccggttcgccatcgagagccggagcggcgaggtgcggctccgcgggccactcgac
cgggagcggcggccccgctaccagctggtgatccgggcctgcgaccacggctccccagcc
ggcctaggcagcgcctttctgtcggtgaggctgctcgacgtcaacgacaaccggccgtcc
atcagcatcgtgtacctgagcccgagtggccgggccgaggtatcggagggagcggcccct
gggcagccggtggccagggtttcggtgggtgacccggacctgggagaaggcggcgagctg
cgggtctggctccacgacgacatcgaggggccgagcggcggtggcagtttcgagctgcga
cacaccccgctcgcctccatcttcctgctgagcgtcaaccgtcgcctggaccgcgagcgc
cgccgcgcgcaccacctcaccgtgctcgcctccgactccgcgcgcccgccgctaacctcg
cggtgctcgctgcagttgcacgtggccgacgtcaacgacaacgcacccgccttcgagcgc
gaggtgtacgaggcccatgtggccgagggcccacttcccgccagcatccgggccccgctg
ctgcaggtaagcgcgcgggacccggatgccggcgccaacggcacggtcaggtacgccatc
ttggcggagggagcgccgcctgttagggtcgacccgctgacgggctggatcagcgccgcc
gcgtgcctggatcgcgagagccacgaggtgatccgcctctcggtggtcgcccgggatctc
ggtgagccgcccctctcctccaccgtcagtgtcctgctgcacgtcgacgatgtgaacgac
aacgaaccggccttcgagcagcagctttacaccgctaccgtgcgggagcacacggagccc
ggcacctgcttccttcaggttaatgcaagagatgcagatgctggtctttttggtactatc
cattattttctttatgatgatgttaacaactatgagaagtcacatctctttaccattgac
tcctcttctggtcaaatctgtacaacccagaatatggatagagataatggacctccaagt
tatgatctgttagtgattgctgaggatgggggtggtttgagtgctcaatcatttatccac
ttagatctacaagacattaacgataaccaaccattattcaacccattgacttatgtaacc
agtatcagcagccatacacagccaggaacagagattacaaatgtgatggcctctgacagg
gattctggagtcaatggaaaggtgtcatatgaacttctaactggaaacttctcttctttg
ttctctgtagactcctcgacaggtgcagtgtatttaacttctaccttcagtcacctacag
gtttctgatgtgcagttgaaaatttctgcacgtgatggtggcaatttgacttcgtctctg
aatgcaactgtaactgtccacattcttcaaagttctgtagctccaacagtgtttgagcag
tcgtcttattcttttaccatactagaaagtgtccctataggaagtgctgttggaagagta
caggttgcaagtatccaagattctctagaactgaagtacagaatttcctctggtgatcca
aatggctatttttctattgaatctaaatctggtctcatcagaagtaataagcagttagat
catgaagcccaaccttttgtgatgcttactattgagtctcaaactagcagctctcctgtc
tacagttatgtacaggtcaacataacaattattgatgtcaatgataatgcaccagctttc
catcaagaatctgaaattattactatttcaaaaaataccttgccaggaacagtcctctac
attgctcatgctgaagataaagacagtggattaaatggaataatcatgtacagtctacag
aatgactatgaacaaacttttagcattgattacgtacatggaacactttatctgaacagg
actgttttctcaaagaaaaaacaatacagtatacatattctagcaagtgaccatggagcc
caacctctgagcactgtgttcatgttattagtaaatgttgaccatttggatggtaatttg
acatttgaaacattaatttatgaagttgaagtcagtgaggctgcgccatttaatatgaga
attttacaagttcatgctcacatgcaggattctaaggtggcctcaggcttggtttactca
cttcagcaaaacttggattcattaacatttggcatccatgctgctagtggctggatttac
attcataaagctctggactatgaaaagaagcatagctatagctttaaagtgtttgccaca
aatccaaaggagcacttaaaacaaagtgctattgcatctgtaatcgttaatgttatggat
gaaaatgataatcctcctcttttcacacaaaatttgtactttttcacaattgaagaaagc
cccattcctcagggcctggttggaaaagtgcaagcaacagatcaggattcaggaaaaaat
tctcacttatcatttatactattatctgatggaaaattcttcagactgaattcaaaaaca
ggcgaaattattaactgggttgcattagatcgggagcagcatattcaccaccagttatct
gtactcgttactgatcatggtgtgcctcgacaaaatgcctccactactatttatatcaca
gtctctgacattaatgataatagaccactattttcttaccctggacctagccgtgaattc
tttatcaaggttttggtcgctcaacctgaaggcacatttttgactaccttaattgctaag
gatccagatgttggaaaaaatggtactgtttctttttctatattagaaaattattcaaat
agcttcaaaattgatgccaaaactggagaactgagaacggccaaggttttcatgtacaat
tatatatcacatcataaaattgtagtgatggcaagtgatgcaggaagccctcctcttcac
cagattgcagaaattaacatacaggttatccctagagtcatagaaaaactgaccattcac
aataaccaaagatattttaccatacctgaaggtttaaggcctggaaacgttgtgggttcc
atcagttcctatgatcatcatttgctgaccagccagagaatacattactacattgatgaa
gatgatgaccactttccatttgaagttgacagaatgacaggagaattgtatcaaagcaat
gaactagactatgaagaaattcctcattatttgctaaaggttatcgaagaagataatagc
cacatcctttcaaggaacatttctatttttgtcagtattaaaatagaagaccaaaatgat
cactcaccatggtttaaagatgatgttgttgtgattggaattgaagaaaatcttccagtc
ggttctcttgttcacatatttaatgcaaaagatgatgatggaagtagaccaaatagtgag
ctccgatattctgttatgtcctggagttccacggaaaatcctttttacattgatccctat
caaggttgcttaaatacaacattgccagttgaccatgaaatgaccaaaacatttcttcta
acaataacagcaatggatcaagcattaaatgtaaatgaacgcaaggtaggctctgtgaca
gctcagattattgtcttggatgtaaatgataacaaacctatatttttatcagaaaatgtt
tcctatgtaatggaagatgaggaagtggggtatctggtccatcatattattgcatatgac
gcagatgcaggtgaaagtggaagaattttatatgctatcatctcagggaatgaagacaac
actttcaaacttgatgaatcatcaggtttgctgacattggtctcccatttagaccatgaa
atacaaaaatcctataccctcacaatttcaggatgggacaatggatttcctattcagtcc
tcaacacagattctgatggtggttgttgttgacatcaatgatgaagcaccaaagttccaa
gattctgtctatgaaattggagtccctgaaaatcttaatgtggatgcatatgttgtcaag
gttgaagctttcgatggagattcagatctaaattctgcactcatttatgagattttacca
ggatctggatatgatgcattcaaaataaaccctcagactggcatcatcaccacaacacaa
gtactggatagagaaatacaagaatattttgtgattaaagttttggtccgagacagtggg
accccatctctatctgacacaagtacagtcatggtgactgtgctggatgaaaatgaccac
cagcctgaattcatgcctcatttacatgagctgcatatttcagagaatatggatccagga
ataatttatgcactcacagctttggacaaggatgctgggaaaaatggacttgttagatat
gaaatcatcggtggtaattttaccaatacattcaaaattgattctgtttctggaacactt
gctacaattaaaggtttggacagagaagaatttaataattgttcccttaccatagaagct
catgaccttggtaatccacaaagaacctctcaggcagaaatttggattattatcttggac
gaaaatgataatagtccagtgtttaaaaaaatgtattaccatattattgtgaacgaagat
gttcctgttgggtcaagtgtttatcagctgattgctagtgacaaggatgatggcttcaat
ggagaaattgcatactctctaattgatgatacatttggagcatttactattaacagtaat
actggcatcatcgtgacaacaaatcaattggatagagagactaagtcacaatatgccttc
cgagcaatggcaaatgataacagcattcaaaatccaagaagtactacagttaacgtaatg
atacttattgaagatgcaaatgacaatttccctatttttaaacaaaatccaatcattgca
tacattactgtgaacactcagatcagccaagttattgccactgtgaaagctgacgataag
gacttgggacaaaacggcactgtcactttccagattttggaacatgattcattatttgca
gtgaataatacaacgggtgacatttaccctaaaacatcaccatctgagcgtcactttggc
agaaataatttgtccgtggttgcagtagaccagggtaacccagttagattgtcaactggg
cttgtgcttatacattggcaagtagaaaaaggaagaacttggtttagtcgtaatatatat
gagattacagttgctgaaaacatcaaacccggcacgctggtattgactgtcacaaatcaa
gactaccacacaaatggagttacttacagcatttttagtgggaatgaaaatgaagcattc
cacatagattcaaaaactggtgagattgtggtaaatgattccaaatttctggattatgaa
gtcagaaccaagatgcatttggtattgttggcaaagaataatcgtcagacagcatatagc
cagttaactattttaattgaagatgtaaatgataaccaaccacattttcaacaaaattat
tataagacatcaatatgggagggccaaacacgtaacacatatgtcatgcaggtttttgca
tctgattctgaccatgggcttaatggccaaattgaatattccataatatctggaaatgaa
aacaaggcttttgttattgattcagctcgaggaattattacaacaaatgctgttttagat
cgagaagtaatttcctcctacagattagttctccaagcagctgatcgaggaagccccagg
ctttcaataactgccattgttggaattcaggttctggatgttaatgataatgctccaagt
attcctccactgaaagctgtgcagatttttgaaaatctccaagctggttatgttgtcaca
cagattttggcaagtgatctggatctaaatcccgttctttcctataattttactaagaat
ggtaatccagaaggtaaatttgctattgactgcaacactggagccattattttgactgag
cctttggactatgagaaacagtctgaatacttggtgaaaatcaagatttctgattcagtg
catgaaactgaagcagctcttggagtttatgtaatggatttaaatgacaattcacctgtc
ttctctcaagaatcatatcagattgtattccctgaactctcgccagtcaatacctacatt
ctgactgtatcggccacagataaagacacaggagtgaatggaaaagtttcctatagaatc
cttccaggaacttctacagagttttatattaatgctgaaagtggtgcactatttaccagg
aggactgtacactacacaagttataactctgtcgtgcaacttcttgtcgaggctaaagat
gatggaaaccctgcattgaaaagcattacatcagtggaaatacgaattcaggatatcaat
aaccatattccccagtttaaccaagcagtttataatattagtgttaatgaagaggcagca
acaggaattattctgttattgttttcaacactagatcaagattggacacgtaagaatgct
tatgttgactatattattattggaggcaatgaacaaaacaaattccacattgagaacact
gtaattaaaagagagaatcagtatagtgtggtaggcaagctgttattaaagaatgtatta
gacagagaacttactgacagctatcatttggttgtgtgtgcatctgatcgaggaaaccca
tcacttagttcaactacaattgtatcaataactgtgcttgatttcaatgataatcctcca
gttttcaacagcttggactaccatattgaagttctagaaagcacccctgtgaaaaatcaa
cttattcaagtctcagcctatgatcaagaccagggagcaaatgcagatattaggtacaat
ataatatctggaaatgaaaaagaatattttagattggatcataaaacgggttttgtagaa
ttaaaattacctcttgactatgaacaagtgtcaaaattcatgttaactatccaagcaatt
gatggtagtgttactaatcaaaaaatggctatttcaatcctttatattaatgtattggat
gacaatgataatgttccttattttgtatttcctacactgaactgcgcagtcaatgaaaat
gagcctatctacacgtcagtgtgtgcagttcatgcttttgataatgatgatggtgccttc
ggttatttgacatattctatcctgacattgcctttaactgactattcaatgtatactagt
tggaataattttattattgatccagttactggtgatatatacaccaaacagctgattgat
tatgagcaacaaaaaaaatgtatatttgtagtccaggctaaggataaaggtaatgcatca
gcaactgcgacaattcaagtgcatattcaaagtattgatgaatatgaacccacttttacc
caagatcggtactatttcactctccctaaccttgtggaggtaggtcaaaaaactggccaa
gttactgctgtcgataaagatgctggacttgatggaattgtgcagttctcatttctaaag
ccctctccttacttttcgctgaaccaaacaagtggagttatttatgtttctggttctatt
cacaatattagaggcagttacaagggagaagaggtaattgatttggtgattaaagctagt
agtcctttaatgggctccaaatcagccattagtactgttgctattaacatctctcaatca
ttggatgccttgataggtaagtcaactgaccacctcactttaagtctctctgtctctttt
gtcattttcttgctcctttctgtgtgctgtggtggtctagtgtatagatataaagcaaaa
gataaaaataattcaagttttggaaaacagaatataaagcttccaataatatccacaatt
atcaatcatctgaatcatccagtagtatcatcaggtcatcagaaagtgaatgataagcag
cgaggaaagacacctgttaattcaccagaacagctgagcttagtggacattcctgtaaag
acaaagtcatttagttcttccaggcaatgtattgcagatgggcaaactgctgaagacagg
gaaattatgatgttcagtgcaaatcagcacagtagaaatcaagttccagaatcaagtaaa
cctggctggacatacagtgttccagattcagagcacaccaaggaatcatactgcttatct
tgtcagttgtgtcaaaacaataccactgatgcggtcatcaatagagagagtgtaggtagc
atttataattttaaggacataagggaagaggaagggttcaatgtggattttattgatgat
gatgtttcaaggaatattcagaatccaagtattaagaaaaatagtgtcatgatggacaat
gctaagaatcacatttttatcatggatgggcggacttcattgatagaatcccttaattca
cttgttcccatacaagaccaaatacaaaacagctacaattatgattacgtacttacctgg
aaacctgggttccaacctttggcctcagcctttactgagattgcaaaactgaaagatgaa
aatgtactaaagcctgttattaaaaatgaatccaaatctactctcccacccccactgata
acatcaattgcacagcaaggcattagggttgtccctccgcaaatgccaatagtaaaattc
aatccatcaactctgaaatattcaagcttacctgttgctactaatacatacagttctact
tcagcgattacatcaaatttctctccatctgtttctgtgcaaactccttcagcttctact
ggtttaagttcagggatacctgaacttaccctaaggcaatcctcacacaagcaaaaacta
gaagagaatactgatgtgattacactgtcaaattga
DBGET
integrated database retrieval system
