Chiloscyllium plagiosum (whitespotted bambooshark): 122554867
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Entry
122554867 CDS
T08871
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3
KO
K08739
DNA mismatch repair protein MLH3
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122554867 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122554867 (mlh3)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122554867 (mlh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c
MutL_C
WW
Motif
Other DBs
NCBI-GeneID:
122554867
NCBI-ProteinID:
XP_043556150
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All DBs
Position
12:complement(86961223..86989474)
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AA seq
1477 aa
AA seq
DB search
MVDRAAAEERGRGRLRLLAADIQAALRSGVAVPSLARCLEELLLNSLEAGCGCAAARVNA
QAGRVQVADNGAGLERAALELAGTRYCSGDPGAGGERDPGGGGDPGAGGEREPGGGGDPG
GGGGEGEGPGNRGWTCPRGDKGRDPGGENDSNPKHLELPGPGGRGEALASIAHLSGLLEI
VSRPQGSSGTWVKLFRNGHARPVYKAEMGRPSPGTTVTVCNLFYQLPVRQRRLGQPMEWE
QIRCRVQALSFLYPGVSFTVRDEASSAVGGSLVVRLPKVSSLQARFAQIHGPQQAATLGC
IQHSSNGFQLSGFISRQGHHNKAQRLIFVNRRLVLKTRIHKELDSLLRRRSLICRPEPGT
GPRGGSHLHPVYIININCDRSQYDACWETNRTLLEFTDWNQLLSLLEEGVQAFLRQEQLL
VDPVEEQIPDPQAIASLDFRFSHERVAVLSKSVHRQVVVPGNPKLETGSEPCQGQVCNDT
KDLALHAQTGTLDKPPLEKEGSIFLRNLSTSKSSLTQPTEQVQSSTALCQLTAVDESTIL
SVIESPSQVEKLAETGIRKQVGESQGEQVRDSRREQVGESQERQAQGESQGQQVGDGKKL
GESRREQAGEREQMGESQEEQAEASQGNRWAEGLHWEQELEVKWQKDEVLGGKKIVKLGM
TGLITHIVPGKTIDVGTLSDNSSDRDHVCRPGPMSAWEILNEKMRKGDGQLMPDDQALSN
ISQKNGRDIPQGSVTACQKIPNTHQSHCTSGSFAESMTISQKMNLPQCRSSLENRNPANC
KPVCCQARFHRKLGMSLITGSLDVFRRNYGKISDDQDAGGPSQDSVTVQDCTGEATERPS
RSNVTVILGTEKLHQNTGIGYADSVTSHQSESLQFDQCDCSSLLRNLYSDGTFPVADCVA
RAHSTPIATPGYSQAKQTSPASKEPRRTLATKLSKLKDLKGQPAEDKSAESKVGSSIGTC
QPCESFKDLQPEQRCAKPPTLLQKHSAAQVSSEHSPVPERRVTEADWQEDSNTATSERVQ
FLSNSTSCVVKLPCPAVDETDVHSDLQVGDQSQDDRTGAVNLSPFTEDFVLMQKMSEPVY
IQTKSIDAEQFLASCVEDSKGQSDPLKRFPSDWLQYFDGSLGKMVYVNSMTGLSSYDVPP
DVQTEAACVRDFTTMPVNVLTKTGFQYQCYPFRSHSLIPFLPRPHEERQKDKSATQSGSN
DSLRSLFREWTNPVFPRPPEVAVDVSNDQAGSLAVKIHNILYPYRFTKDMIGSLQVLNQV
DNKFIACLIETRTNKKAPTDCYERIPDAAGQRRLCSSIVCPPMEISCTQDEIRLLRLYRK
HLETAGLQVEFRDAENPVILIKKVPACFIEKEANEVRRGRHSVTQTILKEFLQEQIEMFQ
STGGFQGVLSRTVLKVLSSQACRGAVKFGDGLNVEECRSLMDSLAGCDLPFQCAHGRPSI
LPLVDLDHLGMEKEVHHRPNLQKLHQLCEARFNSGSI
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggtagaccgagctgcggccgaggagcggggccggggcaggctccggctgttggcggcc
gatattcaggccgcgcttcgctccggggtagcggtaccctccctggcccggtgcctcgag
gagctgctcctcaacagcctggaggccggctgcggctgcgcggccgctcgcgtgaacgcg
caggctgggcgcgtgcaggtggcggataacggggcggggctggagcgcgcggccctggag
ctggcgggcacgcgctactgcagtggggaccctggggctgggggtgagagagaccctggg
ggtggtggagaccctggggctgggggtgagagagaacctgggggtgggggagaccctggg
ggtgggggtggcgaaggcgaaggccctgggaataggggttggacatgtcccaggggagac
aaaggtagagaccctgggggagagaatgacagtaatcccaagcaccttgagctgcctggt
ccagggggccgcggtgaggccctggccagcattgctcacttgtcagggctgctggagata
gtgagcaggccgcagggttccagcgggacctgggtaaaactattccgcaatggccacgcc
cgaccagtttataaggctgagatggggaggccaagtcctggaaccaccgtcactgtctgc
aacctcttttaccagttgccagtgaggcaacgccgccttggtcagcccatggagtgggag
cagatccgctgtcgagtacaggctctgagctttctctatcctggtgtctcattcactgta
cgtgatgaagcctcctctgcggttggaggctcattggtggtgaggcttcccaaagtcagt
agccttcaggcccgttttgctcagatccatggccctcagcaggcagcaacactgggctgc
atccagcactcatccaatgggttccagctgagtggcttcatcagtcgccagggccaccac
aacaaagcccagcgactgatatttgtcaaccggcgactggtgcttaaaacccgtatccat
aaggagctggactcactgctgaggcgacgcagcttaatctgtcggcccgaacctggcact
gggccccggggaggctcccatcttcatcctgtctatatcatcaacatcaattgtgaccgt
agccagtatgatgcctgctgggagacaaacaggaccttgctagagttcactgactggaac
cagctgctgagtttgctggaggagggggttcaggctttcttgcgacaggaacagttactg
gttgaccccgtagaggagcagattcctgatccacaggctattgctagcttagatttcagg
ttctcacatgaaagagtagcagtgctgtccaaatcagttcatcggcaggtagtggttcca
ggcaatccaaagttggagacaggttctgaaccctgtcaagggcaagtctgtaatgacacc
aaagatctagccttgcatgctcaaacaggcacacttgacaagcctccattggaaaaggag
ggaagcattttcctcaggaacctgagtacatctaaaagctctctgacacaaccaacagag
caggtacagtctagcacagctctttgccaactcacagctgtcgatgagagtacgatcttg
tcagtcattgaaagcccctcacaagtggagaagctagcagagacaggcataagaaagcag
gtaggggaatcacagggggagcaggtgagagactcgcggagggagcaggtgggagaatcg
caggaaaggcaggcacaaggggagtctcaggggcagcaagtaggagatgggaagaagttg
ggggagtcacgaagggagcaggcaggagagcgggagcagatgggggagtcacaggaggaa
caggctgaagcatcacaggggaatcggtgggcagaggggctgcactgggaacaggaactt
gaggtgaaatggcagaaggacgaggtgcttgggggaaagaagattgtgaaactgggtatg
accggtctgataacccacattgtccctggaaaaacgatagatgtaggcactttaagtgat
aactcttcagacagggatcatgtctgtcgtcccggcccaatgagtgcttgggagattctg
aatgaaaagatgagaaagggagatggacagctcatgcctgatgaccaagcgctttcaaat
atatctcagaaaaatgggagagatattccccagggttctgtaactgcctgtcagaaaatt
ccgaatactcatcagtctcattgtacatctggaagctttgctgaatcaatgacaatctct
cagaagatgaacttaccacaatgtcgctccagtttggagaacagaaatcctgccaactgt
aagcctgtatgttgtcaggcaagatttcacaggaagctgggcatgtccctaataactgga
tctttggatgtatttcggagaaactatggtaaaatcagtgatgatcaggatgctggaggc
ccttctcaagatagtgtgactgttcaggactgtactggtgaagcaaccgagaggccatca
cgatctaatgtgactgtaatcctgggaacagagaagctgcaccagaatacaggtattggg
tatgctgattctgtaactagtcaccagagtgagagtttgcagtttgatcaatgtgattgc
agtagtcttttaaggaatttgtattcagatggaactttcccagttgctgattgtgtggcc
agggcacattctaccccaattgcaacgcctggttattcacaagccaagcaaacctctcca
gctagcaaggagcctcgaagaaccctcgctacaaaattgtccaagttaaaggatcttaaa
ggacagcctgctgaagataaaagtgcagagtccaaagtaggaagttccataggtacttgc
caaccttgtgagagtttcaaggaccttcagccagaacagcggtgtgcaaaacctccaact
ctgctccaaaaacactcagctgctcaggtgagctctgaacattctcctgttccagagagg
agagtgactgaggcagactggcaggaagatagcaatactgcaacaagtgaaagagtccaa
ttcctgagtaacagcacatcttgtgttgttaagttgccatgtcctgcagttgatgaaaca
gatgttcactctgatctacaggttggagatcagtctcaagatgacagaactggtgctgta
aacttgagcccatttacagaggattttgtcttaatgcagaaaatgtcagagccagtttat
attcaaactaaatcaatagatgctgaacaatttctggcaagttgtgtagaggactctaaa
ggtcaaagtgatccattgaaacgtttcccttcggactggttgcaatactttgatggatcc
cttgggaaaatggtgtatgtaaacagcatgactgggctgagtagctatgatgtcccacca
gatgtccagacagaagctgcttgtgtaagagacttcacaacaatgccagttaatgttctc
actaagacgggtttccaataccagtgttacccattccgcagtcatagtcttatccctttc
ctgccacggccacatgaagagagacagaaagacaaaagcgctacccagtcgggatcaaat
gattctctgcgctcactgtttcgagagtggacaaatccagtctttcctcgccctccagag
gttgctgtcgatgttagcaatgatcaggctggaagtttggcagtgaagattcacaacatc
ctatacccttatcgcttcaccaaagatatgatcggctcattgcaggttcttaaccaggtg
gacaacaagttcattgcctgtttgatagaaacaaggaccaacaaaaaagcaccaacagat
tgctatgagaggataccggatgctgctggtcagaggaggctatgtagctcaatagtatgt
cccccgatggagatcagttgtacccaggatgaaattaggcttttacggttgtacaggaag
cacctggagactgctgggttgcaggtagagtttcgtgatgccgagaatcctgtgatactg
atcaaaaaggtgccagcctgctttatagaaaaagaagccaatgaagttcgtagaggacgg
cattcggtcactcagaccatcctgaaggagttccttcaggaacagattgagatgtttcag
tcaacaggaggattccaaggtgtgctgtcacggacagtgctgaaggtgctgtcctcacag
gcctgtcgtggtgctgtgaaattcggtgatggactcaatgtggaagaatgtagaagcctg
atggactcgctggctggctgcgacctgccctttcagtgtgctcatggaagaccatccata
ctacccctggtagatctggatcatctagggatggaaaaagaggttcatcacagaccaaat
ttacagaaactgcaccagttgtgtgaagcccggttcaacagtggaagtatttaa
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