Chiloscyllium plagiosum (whitespotted bambooshark): 122554913
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Entry
122554913 CDS
T08871
Symbol
nol6
Name
(RefSeq) nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122554913 (nol6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpla03009
]
122554913 (nol6)
Ribosome biogenesis [BR:
cpla03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122554913 (nol6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap
Nrap_D2
Nrap_D3
ATP-grasp_5
UME
Motif
Other DBs
NCBI-GeneID:
122554913
NCBI-ProteinID:
XP_043556246
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All DBs
Position
1:60258923..60368492
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AA seq
1040 aa
AA seq
DB search
MKRKSHDTEYRDLEKFQDEDDSNIDEEMEEKEIKNPGKKRNVMKNKQPKDVGVIEAVKLS
KRELYKPPTNEELNQLKETENLFHSTLLRMQIEELLKEVKLKEKRRKAVDSFLHDVKNLL
NTIPEIKQVDITDQSWIPKGIKVPFLQIPYNIKGKFRFLPPASVKVIGSYLLGTCIKPEI
NVDIAVTMPAEILQAKDYLNQRYLRKRALYLAHIACHLSKNELVGCVKFGYFNSNHLKPI
LYLSPQGKDEKLVTVRLHPCAPASFFKLSRFHPSRNNVRVSWFLEQVSTQEGNDEPATPH
YNNSILVDLVMEQHLHFLFNAAAEFPGMKDGIGIFKVWLQQRALNKGYGCFNGFIASMLV
AYLLSKRKLNKMMSAYQVLRNVLQFLAVSDLTQNGISLFQDTDDSVPSLGEFHQAFDVVF
VDSSGFVNLCAEMTASKYKQIQYEAQKSMEILDDKTVDGFEMLLMTSKLLIQTFDHVFHL
KNVAKLQEGCKKMKLLNELIDHGGNYIVTILPHLLSLLTRGLGKRIHLLTHSLLHIPEWP
VNADPPKHKDGRYLSFGILVNPVFSTNALEKGPPADSPKAAEFRDFWGENSELRRFQDGS
ICEAFLWQGDNICDRRLIPEQIVKHLLQRHLDLPKSALCYVGGLLDSVIEVDKESAGPEE
KNISVVQSYDDLSRKLWNLNGLPLNVTSVQGIHPVFRFTEVFPPVPVKPDYSYYIKDVKS
KCLLPSNQKPCGVYVPALKVICHMEGSGKWPQNKDAIKRIKAAFHIRLADLLQQQHQLTS
HPSATHVDVYKDGYVFQIQVGYHREPLILKEIQTPEGMLKYRDTEESLQLELETIHLPYL
TSTLHGLQQQHSAYSGTCRLAKRWISAQLLSNYISEESIDLLAAYLFTQPAPYSPPASSQ
TGFLRFLNLLSTFDWKNNPLIVNLNGDIKESEFAEIKNDFVATRTQHPVMFIATPNNRKS
SIWTKGRPSALILQRLVELASASLQTLERQLMDPLDNHDLKVMSSCKCLLCFRFIRIHYY
ITFYASLMFTSDFSFTFILL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaaaagccatgatactgagtatcgggatttagaaaaattccaagatgaagat
gacagcaatattgatgaggagatggaggaaaaagaaattaaaaatcctggaaaaaagagg
aatgtcatgaaaaacaaacagccaaaagatgttggagtaatagaagccgttaaactaagc
aaaagagagctgtacaagcctccaactaatgaagagctcaatcagctgaaagaaacagag
aatctctttcattctactttgttaagaatgcagattgaagaactactaaaagaagttaaa
ttgaaggagaaaagacgtaaggctgttgatagcttcctacatgatgtgaagaatctcctc
aacaccatcccagaaataaagcaagtcgatattactgaccaatcttggattccaaaaggc
attaaagttccgtttcttcaaataccatacaatatcaaagggaagttccgttttctacct
cctgcttctgtaaaggttatcggtagttatttacttggtacttgcatcaagccggagatc
aatgtggatattgctgttacgatgccagcagaaatcctccaggcgaaggactaccttaac
cagcgctacctcaggaaacgtgcactctacctggctcacattgcctgtcatttatccaag
aatgagctcgttggatgtgtaaagtttggctacttcaatagcaaccacttgaagccaatt
ttgtatctatctccacaaggtaaagatgagaaactggtaactgtaagacttcatccttgt
gctcctgcatctttcttcaaattgagtcgttttcatccaagcagaaacaatgttagagtt
tcatggtttttggaacaagtatctactcaggaaggaaatgatgaacctgctacacctcac
tataacaatagcattcttgtcgatctggtgatggagcagcaccttcattttctcttcaat
gctgctgctgaattccctggaatgaaagatggaattggaatttttaaagtgtggcttcaa
cagagggcattgaacaagggctatggttgcttcaatggatttattgcttcaatgttggtg
gcgtatttgctttctaagcgtaaactgaacaaaatgatgagtgcataccaggtgctgcgt
aatgtccttcagttcttggctgtatcggacctcactcaaaatggcatcagtctttttcag
gacactgacgactcagtgccatcacttggagaatttcaccaggcctttgacgttgtattt
gtggattcttcaggattcgtaaacctatgtgctgagatgactgcaagcaaatacaagcag
attcaatatgaagcgcagaagtcaatggaaattcttgatgacaagacagtagatggattt
gaaatgcttttgatgacgtcaaagctcctaattcaaacctttgaccatgtcttccacctg
aaaaacgttgccaagctgcaggaaggctgtaagaagatgaaactgctcaatgaattgatt
gatcatggcggtaactacattgttacaattttaccacaccttctttcattattaactcgt
ggactgggcaagcggattcatcttcttactcattcgcttcttcatatacctgaatggcca
gtaaatgcagatcctccaaaacacaaggatggaagatatttgtcatttggtattttagtg
aacccagtattttctacaaacgctttggaaaaaggacctccggctgatagtccaaaggca
gcagaattcagggacttctggggagagaattctgagctgaggcgttttcaagatggatcc
atttgtgaggcgttcctctggcagggtgacaatatttgtgaccgtcgtctaattcctgaa
caaattgttaaacatcttcttcaacgacatttggatctaccaaagtcggcactgtgctat
gttggaggcttactggactctgtcatcgaggtagataaagagtctgcagggccggaggag
aagaacattagtgttgtgcagtcatacgatgacctgagccgcaaactttggaatctcaat
ggacttcccttgaatgtcacatcagtccaagggatacaccctgtgttccgattcacggaa
gtttttccaccagtgccggtgaaaccagattactcttattatatcaaggatgtgaaaagc
aaatgcctgcttccttcaaatcaaaagccatgcggtgtatatgtcccagcattgaaagta
atctgtcacatggaaggaagtggaaaatggcctcaaaacaaagatgcaataaaacgtatc
aaagcagcatttcacatacgattggctgaccttctgcaacaacagcatcaacttacttcc
catccttcagccactcacgttgatgtgtataaggatggttatgtatttcaaattcaagtg
ggatatcatagagagcctttgattctgaaggaaatccagacgccagaaggcatgctaaag
tatcgggatactgaagaatccttacagctagaattggaaaccattcatctaccttattta
acaagcacgctgcatggacttcaacagcagcattctgcctatagtggaacatgtcgtctt
gctaagcgctggatctctgctcagttactcagtaattatattagtgaggagagtattgat
ctactagcagcctacctcttcacacaacctgcaccgtattcacctcctgcatcttcacaa
acaggcttccttcggtttctgaacttgttatctacatttgattggaagaataacccacta
attgtgaatctcaatggtgatataaaagaaagtgaatttgctgagatcaagaatgacttt
gttgccacaaggacccagcatccagtaatgtttatcgctacacccaataacagaaaaagt
tcaatatggacaaaaggaagaccatctgctctgattcttcagcgattggtagaacttgca
agcgcatctttgcaaacactagaaagacaactgatggatccattggataaccatgatctc
aaggtaatgtcttcctgcaaatgtctcctttgctttaggttcatcaggatacattattac
ataacattttatgcatctttaatgttcacatcagattttagtttcactttcattttgctc
tga
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