Chiloscyllium plagiosum (whitespotted bambooshark): 122555118
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Entry
122555118 CDS
T08871
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-3-like isoform X1
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04080
Neuroactive ligand-receptor interaction
cpla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122555118
04082 Neuroactive ligand signaling
122555118
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpla04040
]
122555118
Ion channels [BR:
cpla04040
]
Ligand-gated channels
GABA-A
122555118
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
122555118
NCBI-ProteinID:
XP_043556749
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Position
12:complement(37397684..37514378)
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AA seq
465 aa
AA seq
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MLFFWGLLLFTLFPVAMERGSTSRIKKHHQQPRSQDIKQKSRPESKRSDLTKTHLTKSEQ
LLRIEDHDFAMRPGFGGPAVSVGIDVQVESIDSISEVDMDFTMTLYLRHYWKDSRLAFPS
SNNRSMTFDGRLVKKIWVPDVFFVHSKSSFIHDTTMENIMLRVYPDGNILYSLRTTVTAM
CSMDFSSFPLDTQNCSLELESYAYNEKDLMLHWRNEKEPLKTDEQILLAQFFIQEFRASS
GLAFYSSTGWYNRLFINFILRRHIFFFLLQTYFPTMLMVMLSWVSFWIDRRAVPARVSLG
ITIVLTMSTIITGVNASMPRVSYVKAVDIYLWVSFLFVFLSIIEYAAVNYLTTIEERKKM
KQREKFSDSFRLNQTQTMAFDGCYHDSQLDVSDYGEARLSVANTEARERVSCSNPDGQQL
RRKKSIKGNVTAVMIKNNHVIDTYSRILFPTAFILFNFIYWCLFS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcttctgggggctgctgttattcaccttgtttccggttgcaatggagaggggc
agtaccagtcgtatcaaaaaacaccaccagcagcccagatctcaggatatcaagcagaaa
agtagaccagaaagtaaaagatctgatttaaccaaaacacacctgacaaaatctgaacaa
ctccttagaatagaggaccacgattttgcaatgagacccggatttggagggccggcagta
tctgttggtatagatgtgcaggttgaaagcattgacagcatttctgaagttgatatggac
tttacaatgactttgtacctaagacactactggaaagatagcagactcgctttcccaagt
tccaacaacagaagtatgacatttgatggaagattagtcaagaaaatttgggttccagat
gtgttttttgttcactccaaaagttctttcatacatgacacaacaatggagaacatcatg
ctaagggtatatccagatggcaacatcctgtacagtttaaggactacggtcactgccatg
tgttcaatggattttagcagctttccccttgatactcagaactgctcactggaacttgaa
agttatgcttacaatgaaaaagatctaatgctccattggaggaatgaaaaggaaccactg
aaaacagatgaacagatcttactggctcagttttttatccaagaattccgtgcatcaagt
ggacttgcattttatagcagtactggttggtacaacagattgtttattaatttcatcctg
aggagacacattttcttttttcttttacaaacctactttccaaccatgttaatggtcatg
ttatcttgggtttctttctggattgacagaagagcagtcccagctcgggtttcactggga
ataacgattgttttaactatgtcaacgattataactggagtgaatgcatcaatgcctcga
gtctcttacgttaaagctgtggatatctacctctgggtcagctttctctttgtcttcctt
tctataattgaatatgcagctgtaaactatctaaccaccatcgaagaaaggaaaaagatg
aaacagagagagaagttttcagattcctttaggttgaatcagacacaaacaatggctttt
gatggctgctatcatgatagtcagctggatgtgtcagactatggtgaagctcgtttaagc
gtagcaaatactgaagccagagaacgtgtatcctgttcaaatccggatggtcaacagttg
agaagaaagaaatctattaaggggaacgtcactgcagttatgataaaaaacaatcatgtt
attgatacttactcgaggattttatttcctacagcatttattctttttaattttatttat
tggtgcttattttcataa
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