Chiloscyllium plagiosum (whitespotted bambooshark): 122555138
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Entry
122555138 CDS
T08871
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpla01002
]
122555138 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122555138 (usp9)
Enzymes [BR:
cpla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122555138 (usp9)
Peptidases and inhibitors [BR:
cpla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122555138 (usp9)
Ubiquitin system [BR:
cpla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122555138 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_UBL1
UCH_1
DUF3517
FAST_1
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
122555138
NCBI-ProteinID:
XP_043556784
LinkDB
All DBs
Position
12:39128282..39400324
Genome browser
AA seq
2168 aa
AA seq
DB search
MTATTRGSPVGGNDNQGQAPDGQSQPPLPQNQTSSPNTSSENSPVSPPDEQGQGDAPPQL
EEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAVDLSKKSLDIKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLIELCVAKLSQDWFPLLELLAMALNP
HCKFHIYNGTRPSETVPAGVQLAEDELFARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FVSGSALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGSPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKIQWIDRFVEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHSLVTLVAENLSAYMENIRQFHKEYPEYDPQTVRSGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWFSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLEYLWRVVIQ
GSDDIASRAIDLLKEIYTNLGPRLQVNQVEIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHVSLVVRFPNQGRQVE
DLDIWSHTNDTIGSVRRCILSRIKANSAHTKVELFIGGELVDPADDRKLIGQLNLKDKTL
ITAKLTQISSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHPRYISF
LWQVADLGSSLNMPQLRDGARILMKLMPPDNTTVEKLRAICLDHAKLGESSLSPNLDSLF
FGQSASQVLYLTEVVYALLMPASAPLGEDASDFQYNFLKSGGVFLVLGILTRNNFMLNAD
METRRAAYLNALKIAKLLLTAVGYGHVRAVAEAFQPVVEGSSTVSPINHATHSQAVVLQN
ALHNIPNPTSECMLRNVAIRLAQQISDEASKYIPDICVIRAVQKIIWASGCGSIQLVFSS
SEEISKIYEKTNAGNEPDSEDEHVCCEALEVMTLCFALVPTALDTLSKEKAWQTFIIDLL
LHCHSKLVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLASTARERAKHSADYFTLLR
HLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTSETGVEETILEGHLGVTKELLAF
QTPEKKYHMGSEKGGANLIKELIDDFIFPASNVYLQYKKSGELPSEQAIPVCSAPAAINA
SFELLVALAVGCVQNLKQIVDTMTDMYYAGCEALTEWEYLPPVGPRPSKGFVGLKNAGAT
CYMNSVIQQLYMIPAIRNGILTIEGTGSDVDDDTSGDEKQDNESNVDPRDDVFSYHHHYD
KPVIGKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDA
LEFFNSLVDSLDEALKALGHATMLSKVLGGSFADQKICQGCPHRYECEESFTTLNVDIRN
HQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWER
ECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDINPENQLIQNEQPDNEQPGSTKYRLVG
VLVHSGQASGGHYYSYIIQRNGGDGEKNKWYKFDDGDVTECKMDDDEEMKNQCFGGEYMG
EVFDHMMKRMSYRRQKRWWNAYILFYERMDTLAKDNELIKYISELEISIKPHQIKMPSVI
ERSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNPPPGQDHLLPEAEELAMISIQL
AARFLFNTGFHTKKIVRGPASEWYDALCILLRHSKNVRCWFAHNVLFAYPNRFSEYLLEC
PSTEVRSAFAKLIVFIAHFSLQDGPCPSPFASPGPSTQKSSAIFHFEYRAVSFYSDMQSF
AQCFESFL
NT seq
6507 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgacccgtggctctcctgtaggagggaatgacaaccaaggccaggcgcct
gatggacagtctcagcctcctctcccacagaatcagacgtcttctccaaatacatccagt
gagaactcgccagtgagccctcctgatgaacaaggtcagggtgatgctcctcctcaactt
gaggaggaggagcctgcttttcctcacactgatttggccaagctggatgatatgattaat
agacctcgttgggtagttccagtgttgcctaaaggtgaattggaagtcctactagaagct
gctgtagatcttagtaaaaaaagccttgatatcaaaagtgaagcatgtcagcgctttttc
cgtgatggtctcacaatttccttcacaaaaattctaaccgatgaggctgtgagtggttgg
aagtttgaaatccataggtgtattataaataatactcaccgcctcatagaactgtgtgtg
gccaagctgtcccaagactggtttccacttcttgaacttcttgctatggccttaaatcct
cactgcaaatttcatatctacaatggtacacgcccatctgagactgttcctgcaggagtc
caactagctgaagatgaactctttgctcgaccgcctgatccacgttcaccaaagggttgg
cttgtggatctcatcaacaagtttggaacattgaatggatttcagattctacatgatcga
tttgtcagtggttcagcgttaaatgttcagataattgcagcactcatcaaaccttttgga
cagtgttatgaatttcttaccttgcacacagtgaagaaatacttccttcctataattgaa
atggttccacagtttctagaaaatctgacggatgaggagctgaaaaaagaagcgaagaat
gaagccaaaaatgatgcattatctatgataataaaatcactgaaaaacttagcttcacgg
gttcctgggcaggaggaaactgtcaaaaatttagaaatatttaggctaaaaatgatacta
aggttgttacaaatttcatcttttaatggaaaaatgaatgcactaaatgaagttaacaag
gtgatttccagtgtctcttattatactcatcgccatggcagtcccgaagaagaagaatgg
ttgacagcggagagaatggcagagtggattcaacaaaacaacatcttgtcgattgtatta
cgtgacagtctacatcagccacaatatgttgagaaactagagaaaatacttcgctttgtc
attaaagaaaaagcactcaccctccaagatcttgacaacatttgggccgcacaggctggt
aaacatgaagcaattgtgaagaatgtccatgacctccttgcaaaattggcttgggatttt
tctccagaacagcttgatcacctttttgattgctttaaggcaagttggacaaatgcaagt
aaaaagcaacgtgaaaagctgttagagttgattcgtcgccttgctgaggatgacaaagat
ggtgtgatggcacacaaagtgttgaacctcctgtggaatttagcacacagtgatgatgtc
cctgttgacatcatggaccaggctttaagtgcgcacatcaaaatcctggattatagctgt
tctcaggaccgagacactcaaaagatccagtggatagatcgttttgttgaggaactacgt
accaatgataaatgggtcattcctgctttgaaacaaattagggaaatctgtagcctattt
ggagaagcaccacagaatttaagccagacccaaagaagtcctcatgtgttctatcgacat
gacttgattaaccaacttcaacacaatcattcattggtcactttggtagctgaaaacctg
tctgcttatatggaaaatataagacaattccataaagagtacccagagtatgatccacaa
actgtacgatcagggagtcggtatagccatgtgcaagaggtccaagagcgactaaatttc
ttgagatttttattgaaggatggccagttgtggttgtgtgctcctcaagccaagcaaatc
tggaagtgcttagctgagaatgctgtctacctttgcgatcgtgaagcctgttttaaatgg
ttttctaagttgatgggagatgaacctgacttagacccagacataaacaaggactttttt
gaaaataatgtcctgcaactggatccttctctcttaactgaaaatggaatgaagtgcttt
gagaggtttttcaaagctgtgaactgtcgtgaagggaagcttgtagcaaaacggcgtgct
tatatgatggatgatctagaattaataggactggaatatctttggagggtggtaattcaa
ggaagtgatgacattgcaagtagagcaatagacctgctaaaagaaatatacacaaatctt
ggtccacgattgcaggttaatcaggtcgagattcatgaagacttcattcagtcgtgtttt
gatcgattgaaggcctcttatgatacactgtgtgtactagatggtgacaaagacagtatt
aattgtgcaaggcaggaggcaatacggatggtacgtgtattgacagtgttgcgtgagtac
ataaatgagtgcgacagtgactaccatgaagaacggacgattctaccaatgtctagagct
tttcgtggaaaacatgtatctcttgttgtacgatttccaaatcaaggacgtcaagtggaa
gatttggatatttggtctcacacaaatgacaccattgggtctgttagacgctgtatcctc
agtagaataaaagcaaacagtgcacatacaaaagtagaactatttattggtggtgaactt
gtagaccctgctgacgatcggaaattaatcggacagttaaatcttaaagataaaactctt
attacagccaagctaacacagataagttcaaatatgccttcaagccctgatagctcttca
gattcttcaacgggctcccctggaaatcatggtaaccactacagtgatggtccaaatcct
gaggtagaaagctgcttaccaggagtgataatgtccttacacccgcgatacatttccttt
ctttggcaagttgcggatctgggcagtagcctaaacatgccacagctgagagatggtgct
cgcattcttatgaagctcatgcctcctgataacactacagtcgaaaaacttcgtgctatt
tgcttggatcatgcaaagctcggggagagcagcctcagtccaaatcttgactcacttttt
tttggacaatctgcctctcaagtgttatacctaactgaggtggtgtatgctttgttaatg
cctgccagtgcacctttgggagaagatgcaagtgatttccagtacaactttttgaaaagt
ggaggtgtattccttgttcttggcatactaaccaggaataactttatgctaaatgcagac
atggagactcgaagggctgcgtatctcaatgcattaaaaatagccaaattattgctcaca
gcagttggatatggtcatgttagagctgtggcagaagcatttcagccagttgtggaaggt
tccagtactgtttcaccaataaatcatgctactcatagtcaggctgtagttctacagaat
gctctgcataacattccgaaccctacttcagaatgtatgttgcgaaatgttgccattcgt
ctggcacagcagatttcagatgaggcttcaaaatacatcccagacatttgtgttattaga
gcagtacaaaagattatctgggcctctggctgtggttcaatacagcttgtgttcagttca
agcgaagagattagcaagatatatgagaaaactaatgcaggaaatgaaccagattctgaa
gatgagcatgtttgctgtgaagcactggaagtgatgacgttgtgctttgcactggttcca
acggcgcttgatacacttagtaaagaaaaagcatggcagaccttcataatagatttgcta
ctgcattgtcacagcaaattagttagacaaatggcccaagagcagttcttcttgatggct
accagatgctgtatgggacatcgacctctgcttttcttcattactctactcttcacagtg
ctggcaagtactgcaagagagagagcaaagcattcagcagactacttcacactgttgagg
catcttcttaattatgcatacaacagtaacattaacctgcccaatgcagaagttctgctc
aacaacgaaattgactggctcaagcggattagagatgaggtgaaaagaacaagtgaaact
ggtgttgaagaaacaattctagaaggtcatcttggagttacaaaggagctattggcattc
cagacacctgaaaagaaatatcatatggggtcagagaagggtggagcaaatctcattaag
gaactgatagatgacttcatatttccagcctctaatgtttatctacagtacaagaaaagc
ggagaattgccatctgaacaggccattcctgtctgtagtgcacctgctgcaatcaatgcc
agctttgagttgttggtagcactggctgttggctgtgtgcaaaacctcaaacaaatagtc
gacactatgacggatatgtattatgcaggttgtgaagcattgacagagtgggaatacttg
ccaccagtaggaccacgtccatcaaaaggatttgtaggattaaagaatgctggtgcgaca
tgctacatgaattctgttattcagcagctatacatgatccctgctattagaaatggtatc
cttacaattgaaggcactggtagtgatgttgatgatgatacatctggtgatgagaaacag
gataatgagagcaatgtcgatcctagagatgatgtttttagttaccaccaccattatgac
aaacctgtaattggaaaaactgaagatcgaaaggaatacaatattggggtcctgagacat
ctgcaagtcatttttggacatttggctgcctcaagattgcagtactatgtgcctagaggt
ttctggaaacagttcaggctttggggtgaaccagtcaaccttcgagagcaacatgatgct
ttggaattcttcaactctttagtagatagtctggatgaagctttgaaagctcttggacat
gcaactatgctcagcaaagttcttggaggttcctttgctgatcagaagatttgtcaaggc
tgtccacacagatatgaatgtgaggaatccttcacaacactgaatgttgacattagaaat
catcaaaatctgcttgattcactcgaacagtatgtcaaaggagacctactggaaggtgcc
aatgcataccattgtgagaaatgcaacaaaaaggttgatacagtgaagcgtttactaatc
aagaaactgccaccagttttagcaattcaactgaagcgatttgactatgactgggaaagg
gaatgtgcaattaaattcaatgactattttgaatttccacgagagctggatatggaacct
tacactgtggctggggttgccaaattggaaggggatgacatcaacccagaaaatcaattg
attcaaaatgaacagccagataacgagcagcctggtagcactaaatatagactggttggt
gtattagtgcatagtggtcaggcaagtggaggacattattattcatacatcattcaacga
aatggtggagatggtgagaaaaacaaatggtataagtttgatgatggtgatgtaactgag
tgcaaaatggatgatgatgaagaaatgaaaaaccagtgctttggtggcgagtatatgggt
gaagtttttgaccatatgatgaaacgaatgtcatacaggcggcaaaagcgatggtggaat
gcttacatactattttatgaacgtatggacacactcgctaaagataatgaattaattaag
tacatttctgagctggagattagtataaaaccacaccagataaaaatgccaagtgtcatt
gaacgaagtgtacggaaacagaatgtgcagttcatgcacaatagaatgcagtatagcctg
gagtatttccaatttattaagaaactactgacctgtaacagtgtctacctgaatcctcca
cctgggcaagatcatctcttaccagaagctgaagaactggctatgatcagtattcaactt
gctgcgagatttttgtttaatactgggtttcacacaaagaaaatagtccgtggtccagca
agtgaatggtatgatgcattgtgtatcctgctccgtcacagcaagaatgtacgctgttgg
tttgcacataatgttctttttgcctatccaaatcgcttctcagagtaccttctggaatgc
cccagtacagaagtgaggagtgcttttgctaagctcattgtatttattgcacatttctcc
ttgcaagatggaccatgcccctccccttttgcatccccaggaccatccactcagaaatct
tcagcaatttttcattttgaatacagagcggtgagtttttattcagatatgcaaagtttt
gcacaatgttttgaaagttttttgtaa
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integrated database retrieval system
