Chiloscyllium plagiosum (whitespotted bambooshark): 122555219
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Entry
122555219 CDS
T08871
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122555219 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpla03021
]
122555219 (gtf2e1)
Transcription machinery [BR:
cpla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
122555219 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
122555219 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
122555219
NCBI-ProteinID:
XP_043556918
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All DBs
Position
12:47570086..47619633
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AA seq
431 aa
AA seq
DB search
MTDPDVVTEVPAALKRLAKYVVRGFYGLEHALALDILIRNPCVKEEDMLELLKFDRKQLR
AVLNTLKNDKFIKSRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFKCPTCFNTFTDLEANQLFDPMTGTFRCTFCHTEVEEDESALPKKDARTLLARF
NEQIEPIYALLRETEDINLAYEILEPEPTEIPSLRASQRALGAGSGATHLQKESWANKGP
TYEDLYTQNVIINMEEHDAQHKIVSDSKPAKERPIWMRESTVRGSFKDLEEVEGNNDVES
YHDREGKGNPLEANEEVMQTLLIHEKKSTSATVAATAAIPTSNASDSESDTSESEDESPR
PQAPTVSFPAAAAEEDEEFEEVEDEPIVMVAGQPYSYSQVSQCVELVTQMTAEEKEVYIA
MGQRMFQEMYD
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgactgatccagatgttgtgactgaggtccctgcagctttgaaacgtcttgccaaatat
gttgtgagaggattttatgggctggaacatgcactggccttggatattctcattagaaac
ccctgtgtcaaagaggaggacatgctggagctgctgaaattcgaccgcaaacaactgcga
gcagtcttgaacacactgaaaaatgacaaatttattaaaagtagaatgcgagttgaaact
gctccagatggtaaaactacaaggcataattattacttcataaactaccgccttctggtc
aatgtggtgaagtacaaacttgaccacatgaggcgtaggattgaaactgatgaacgcgat
tccaccaacagagcctcttttaaatgtcccacctgtttcaacacattcacagatctggag
gcaaatcaactatttgacccaatgacaggaacattccgatgcaccttctgtcacactgag
gtggaagaggatgaatctgcattaccaaagaaggatgccagaacactgttggcaagattt
aatgaacagattgaaccaatctatgctctactgcgagaaactgaagatattaatttggcc
tatgaaatcctggagccagaaccaacagaaattccatcacttcgggcaagtcaacgagca
cttggtgctggcagtggagctacacaccttcaaaaagaatcatgggcaaacaaaggacct
acatatgaggatctctacactcaaaatgtcatcattaatatggaagaacatgatgctcag
cataaaattgtatctgatagcaagccagctaaagagagaccaatctggatgagggagagc
actgtccgaggaagctttaaagatttagaagaagtggaaggtaataacgatgttgagtca
taccatgaccgtgagggaaaagggaatccattggaagcaaatgaagaagtcatgcaaacc
ttgctcatccatgaaaagaagagtacatctgcaactgtggctgcaactgctgcaatccca
acttcaaatgccagtgattcagagagtgatactagtgaatcagaggatgaatcacctcga
ccacaggcacctacagtgtcattcccagcggcagcagcagaagaggatgaagaatttgaa
gaagtggaggatgagccaattgtgatggtagcaggtcagccatattcatatagccaggtc
agccagtgcgttgagctagtgacacagatgactgctgaagagaaagaagtatatattgcc
atggggcaaagaatgttccaggagatgtatgactga
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