Chiloscyllium plagiosum (whitespotted bambooshark): 122555221
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Entry
122555221 CDS
T08871
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like
KO
K08518
syntaxin-binding protein 5
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122555221 (stxbp5l)
Membrane trafficking [BR:
cpla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122555221 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
122555221 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40
Beta-prop_IFT140_1st
ANAPC4_WD40
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
EIF3I
Lgl_C
Synaptobrevin
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
122555221
NCBI-ProteinID:
XP_043556925
LinkDB
All DBs
Position
12:47898085..48444679
Genome browser
AA seq
1300 aa
AA seq
DB search
MKKFNFRKVLDGLTAASSPAHSGGGLGSGTGAGGGSSAGAVSGGSGAASGGGGGGAMGGG
RGGAGDSEIPETLTSEHFQICKTVRHGFPCQPSALAFDPVQKILAIGCRTGALRILGRPG
VDCYCQHESGAAVLQLQFLINEGALVSACADDTLHLWNLRQKRPAILHSLKFNRERITFC
HLPFQSKWLYVGTERGNTYVVNIESFVLSGYVIMWNKAIELSTKTHPGPVVHLSDSPRDE
GKLLMGFESGTVVLWDIRSKRADFRFYYDEAIHSVSWHHEGRQFMCSHSDGSLTLWNLKN
PSKPFQIIVPHGKVQRDGKKPEPCKPILKVDHKTCRYSEPFIIFSGGLSYDKGCRRPSLT
IMHGKSITVLEMDYPIVDFLALCETPYPNEFQEPYAVVVLLEKDLIVVDLTQSNFPIFEN
PYSMDLHESPVTCSAYFADCPPDLIPALYSVGAKQQKKQGYSTKEWPIAGGTWNLGAQTY
PEIIITGHADGSLKFWDASAITLQVLYKLKTSKVFEKQKVKDAKQIAEIVEEDPYAIQMI
SWCPESRMFCVAGISAHVIVYRFSKHEITVELVALELRLQYDVEDIVTPEPESVQPITDT
SSQLSISKTSALSGSANALTSEGLKDNIPCLKVKTRPVRMAPGYQADLVIQMVWVDGEPP
QQITSLAVSSAYGLVAFGNCNGLAIVDFMQKTTLLSMGTIELYGTNDPFQRHLRSPRKSK
QLNAETLCMRGLSSFYSLKRLRASYQTAVTALSLGCCEGLTELLDNPVSQEIERCKSPTS
GKVKGPRKLSLPTDLKTDLGSVKSSCIEGKATISRNSMKAFERTRTIYEDHVNGVCTSPV
SQPCNTGKRLSIADTSKLNRRGPGRPPFRKAQSAACMEISLPVTQTEVGHTSRRAMLQQL
HGISIFSHDEHHASSYSWSEKESKENSFNRSRSSSVSSIDKESKEAITALYFMESFSRKM
DSTLSPCLWVGTSLGTVLVISLNLPPEEQRYSEPLMVSPSGTVLMLKGALLTFSFLDSLG
GLIHPPYEVWRDPNNEDKDDKGRKRKLVTFSPSSSQEMGDHQYVVLCSEKQAKVYSLPSQ
SCLYVHNITETSFVLRADVVTLCNSICLACFCANGHIMTLSLPSLRPLLDVNYLPLTDMR
IARTFCFTNGGQALYLSSPTEIQRITYSQDMCENLQEMLGDLFSPIETPEAQNRGFLKGL
FGGSGQTFDREELFGEASAGKASRTLAQHIPGPGGIEGVKGAASGVVGDLARARIALDER
GQRLGELEDRTAAMMASAETFSKHAHELMLKCRDKKWYQF
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatttaatttccgaaaggtgttagacggtttgacagccgcgtcttccccggct
cattctggcggcgggctcggatctgggacaggcgccggtggcggtagcagtgctggcgct
gtcagcggaggcagtggcgctgccagcggcggcggtggcggcggtgccatgggaggaggg
agaggaggagctggggactcggagataccggagacactcacttccgaacactttcagatc
tgtaagacggtacgtcatggcttcccctgtcaaccttctgccttagcttttgatccagtg
caaaaaatcctggctattggatgccgtacaggagcactacgaattttaggtcgtcctggg
gttgattgttactgtcaacatgaaagtggggcagctgtgctgcagcttcagttcctaatc
aatgagggagctttagtaagtgcttgcgcagatgacacacttcatttatggaacctccgc
caaaagcgtccagcaatccttcattcactgaaattcaatcgagagcggattaccttctgc
catctccctttccagagtaaatggttgtatgtgggcacagagcgaggaaatacatacgtt
gtgaatatcgagtcatttgtcctatcgggatatgtcataatgtggaataaagcaatagaa
ctgtctacaaaaactcaccctggccctgttgttcatttaagtgacagtccaagggacgag
gggaaactgctcatgggatttgaaagtggaacagttgtgctgtgggacataaggtcaaag
agagcagatttcagattttattatgatgaggccatccattctgtcagctggcatcatgaa
gggaggcagttcatgtgtagccattcagatggtagtttaaccctttggaacttgaaaaac
ccaagcaaaccttttcagatcatagtaccacatggaaaagtccaaagggatggaaaaaag
cctgagccgtgtaaaccaatcctaaaagtagatcataagacgtgtagatatagtgaacca
tttatcatattttctggaggactttcctatgataaagggtgcagaagacccagcctgaca
attatgcatggcaaatctattacagttttggaaatggattatccaatagtggacttccta
gctctttgtgaaacaccgtatccaaatgaatttcaagaaccttatgcagttgttgtgcta
cttgaaaaagatttgattgttgtcgatctgacgcaaagcaattttcctatctttgaaaat
ccatattcaatggatctgcatgagtctccagtgacttgctctgcgtattttgccgattgt
cctcctgatttgatacctgcactttattctgtgggagcaaaacaacaaaaaaaacaggga
tatagcacaaaggaatggccgattgctggtggcacatggaatttgggtgcacaaacgtac
cctgaaatcatcataactgggcatgcagatggctcattgaaattttgggatgcttctgcc
attactcttcaagtattatacaagttgaaaacctccaaagtatttgaaaagcagaaagtg
aaagatgcaaagcaaattgcagagattgtagaagaggatccgtatgctatacaaatgatc
agttggtgtccagagagcagaatgttctgtgtcgcaggcatttcagcacatgtgattgtt
taccgattcagcaaacatgaaattactgttgagttagtggctctggaactacgattacag
tatgatgttgaagatattgttacccctgaacctgagtctgtacagccaatcactgatact
tcttcacaactttccatttcaaagacttctgcattatctggtagtgcaaatgcattaaca
tcagaaggattaaaggacaacatcccatgtctcaaggtcaaaacccgacctgtcagaatg
gctccagggtaccaagctgatcttgtcattcagatggtctgggtcgatggagaaccacct
caacaaatcaccagcttagcagtgagctctgcctatggccttgtggcatttggaaactgt
aatggtttggcaattgtggactttatgcaaaagaccactctactcagcatgggaactatt
gaactttatggtacaaatgacccatttcaacggcatcttagatcacctcgaaaaagcaaa
cagctcaatgcagaaactctttgcatgcgtggcctctctagtttttactcactgaaacgg
ctccgtgcgtcttatcagactgctgttacagcattaagccttggctgctgtgaaggtttg
accgaacttctcgataaccctgtatcacaggagattgaacgctgcaaatctcccacttca
ggtaaagtaaaaggaccaagaaagttaagtctgccgacagatcttaagactgatctcgga
tctgtgaaaagttcctgtatagaaggaaaagcaactatttcaagaaactcaatgaaagct
tttgagaggactagaaccatttatgaagatcatgtcaatggagtttgcacaagtcctgtt
tcccaaccatgcaataccgggaagcgtctttccattgctgatacttcaaagctgaatcgc
cgagggccaggccgaccaccatttcgaaaagcacaatcagcagcctgcatggaaatctca
ttgcctgtcacccagacagaagtaggccacacttccagacgggcaatgcttcagcaattg
catggcatcagtattttctctcacgatgagcaccatgcttcctcatattcatggagcgaa
aaagaaagtaaagaaaattcttttaaccggtcccgaagttccagtgtctccagcattgac
aaagaatcaaaggaggctataactgctctgtattttatggagtcctttagccgaaagatg
gactcgaccctttcaccttgtctatgggttggtaccagtttgggtacagtgctcgtcatc
tccttgaatttacctccagaggaacaaagatattcggaaccacttatggtctctcccagt
ggaacagtgttaatgttgaaaggagctctactaacattttccttcttggactctctgggt
ggtctaatacaccctccatacgaagtgtggagggatccaaacaatgaagataaagatgat
aaaggacggaaaaggaaacttgtgacattttcaccatcttcctctcaggagatgggggat
caccagtacgtagtgctctgctcagagaaacaggctaaagtttattccctcccttctcaa
agctgtctctacgtacacaatattactgagacatcttttgtattacgagcagatgtcgta
actttgtgcaacagcatctgcctggcctgcttctgtgctaatggacatattatgacccta
agcttgccaagtcttcgccctttgttggatgtaaactatttgcctttaactgatatgaga
atagcacgaactttctgttttacaaatggtggacaagctctgtatctaagctcccccact
gaaatccagcgaattacctacagccaagatatgtgtgaaaaccttcaggaaatgcttgga
gatttgtttagccctattgaaactccagaagcccaaaacagaggcttcttaaaggggcta
tttggtggaagtggacaaacatttgacagagaagagctatttggtgaagcttcagcaggc
aaggcatctcggactcttgcccagcatatccctggacctggtggaattgagggagttaag
ggtgcagcatctggagttgttggagatctagcccgtgctcggattgctttggatgaacgt
ggacagagactgggtgaactggaagaccgaactgcagccatgatggcgagtgcagagaca
ttctctaaacatgcacatgagttgatgctgaaatgcagagataagaaatggtatcagttc
tga
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