Chiloscyllium plagiosum (whitespotted bambooshark): 122555236
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Entry
122555236 CDS
T08871
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122555236 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122555236 (pou2f1b)
03021 Transcription machinery [BR:
cpla03021
]
122555236 (pou2f1b)
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
122555236 (pou2f1b)
Transcription machinery [BR:
cpla03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
122555236 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Ntox15
Homeobox_KN
T6_Ig_like
Motif
Other DBs
NCBI-GeneID:
122555236
NCBI-ProteinID:
XP_043556951
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All DBs
Position
12:complement(49808982..49922189)
Genome browser
AA seq
626 aa
AA seq
DB search
MSDVTNRCLYVQLAGTTLQPTASQTLNLQVKSEESGDSSSQQTTTQPSLQPSLQTTLPQT
QLMLAGGQITGLTLTTAQQQLLLQQAQAQLLAAAVQHSANQQHNTTGAAISATAATPMAQ
IPITQPIQIQDLQQLQQLQQQNLNLQQFVLVQPGHPITTNLQPTQFIISQTPQGQQGLVQ
AQNLLQQLPQQSQANLLQSQPNITFTQPATPTRTTIATTPIQSVQQSQSTPKRVDTPNIE
EPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMC
KLKPLLEKWLNDAENLSVDSALSNPSSLASPGLGIEGLSRRRKKRTSIETNVRVALEKSF
LENQKPTSEEIMMIADQLQMEKEVIRVWFCNRRQKEKRINPPSSNSGTTTSTKTIFHNPT
SMVASTSNLVTSSTPTTLAVNAMQMPASSAGVTNFSISGTTASGTAPTNVASVITGLSSA
VSTSSVTSPSLTPSPSASISVTESSSSSDANTTQSTSTGLVNPLCTSQITVSASGLQTGA
TALQAAAAQVSTGAGLATNPGLAAMAAAAGLANPSLMSAPQFAAGGALLSLNPGSLGGAL
GPALMSNSTLATIQGCRLAPVRWSSW
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgtgacgaacagatgtttatatgtacaacttgctggaacaactttgcagcca
actgcttcacaaacattaaatttacaggtaaaaagtgaagaatcaggggattcttcatcc
cagcaaacgacaacccagccttcgctgcaaccatctttacagaccacccttccacagaca
cagcttatgcttgctggcgggcagatcactgggcttacattgacaacggcgcagcaacag
ttattgctccagcaagcacaggcccagctcttggctgctgcagttcaacactcagcaaat
cagcagcataataccacaggagccgccatctctgccacagcagcaactcctatggcacaa
atacccatcactcagccaatccaaatacaagatctgcaacagttacaacagttacagcaa
cagaacttaaatctgcagcagtttgttctggtgcagccaggtcaccctattaccaccaac
ttgcaaccaacgcagttcatcatctcgcaaacgccacaggggcaacaaggtctcgtacaa
gcccagaatcttctacaacaactacctcagcaaagccaagccaacctcctgcagtctcag
ccaaacatcaccttcacgcagccagcaacaccgacacgcacaacgatagcaacaactcct
atccagtcggttcagcagagccagtcgacaccaaagcgcgtagatactccaaacatagaa
gagcccagtgatctagaggaacttgaacagtttgccaagacgtttaaacagagacgtatc
aaactcgggttcactcagggtgatgtaggacttgccatgggaaaactctatggaaatgat
tttagccaaactacaatctctcgttttgaagccttgaacctcagctttaagaacatgtgc
aagctcaaaccattgcttgaaaagtggttgaatgatgcagaaaatttgtcagtagactct
gcactgtcaaatcccagctccttggcttctccaggtctgggaatcgaagggctgagccgc
aggagaaagaaacgcaccagcatagagaccaatgttcgagtggccttagaaaagagtttc
ctggagaaccaaaagcctacctcggaggagatcatgatgattgccgatcagctgcagatg
gagaaggaggtgatccgagtctggttctgtaacagacgccagaaagagaagcggattaat
ccacccagcagtaacagcggcactaccacttctaccaaaacaatttttcacaaccccacc
tccatggtggccagcactagtaacctcgtgacgagtagtacaccgactactctggctgta
aatgcaatgcagatgcctgcatccagtgctggtgtgaccaacttcagcatttcaggtaca
actgcatcagggacagctcctacaaacgtggcatctgtaatcaccggcttatcttctgca
gtttctacgtcatcagtcacttctccatctctaaccccttcaccgtcagcgtccatttca
gtgactgagtcatctagcagcagtgatgcaaataccacacagtcaacctcaactggctta
gtaaacccgctgtgcacaagccaaatcacggtgtcagcatctggactgcagacaggtgcc
actgcgctgcaagcagcagctgcacaggtatccactggtgctggtcttgccaccaatcca
ggcctagctgccatggctgctgctgcaggactagccaatcctagcttaatgtcagcccct
caatttgcagctggaggtgccttactaagtctgaatccagggagtcttggtggtgctctt
ggtccagcattaatgagtaatagcacactggcaaccattcaaggatgcaggttagctcct
gtacggtggtcttcctggtga
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