Chiloscyllium plagiosum (whitespotted bambooshark): 122555304
Help
Entry
122555304 CDS
T08871
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122555304 (chd1l)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122555304 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
LIG3_BRCT
SWI2_SNF2
BRCT_2
Selenoprotein_S
BRCT
AAA_22
ERCC3_RAD25_C
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
122555304
NCBI-ProteinID:
XP_043557095
LinkDB
All DBs
Position
12:57902733..58011870
Genome browser
AA seq
1007 aa
AA seq
DB search
MTHFVQNLRNLLSNQPEEFEQVEEEDVRRWGLTGIRLRPYQLIGLNWLIRCHSIQHGSIL
ADEMGLGKTCQSICFLLCLTGRQKEKGPFLILCPLSVLKNWTEELAGFAPRLSVVVYTGD
RDTRQALQQDLKNCNFHVLLTTYEICLKDASFLSRSNWSVLIVDEAHRLKNQNSLLHKTL
KSFSVRFTLLLTGTPAQNNLHELYSLLSFVEPKVFSGDEVDEFIKYYSNVEEDAVNAKEL
HSLMHPFLLRRIKADVAAELPKRMDIILYHGMSVLQKKYYKAILMKDLDAFENEMGKKTR
LMNILIQLRKCVDHPYLFDGVEPEPFQIGDHLVEASGKLHLLDKLLAFLHSRGHRVLVFS
QMARMLDILQDYMEYRGYSYERLDGSVRGEERYLAIKNFNQHDIFVFLLSTRAGGVGMNL
TAADTVIFVDSDFNPQNDLQAAARAHRIGQKKPVKIIRLIGRDTVEELIYRRAMSKLKLT
NTLIEGGQFSMKEGEELPATFDMQLSDILKFGLDKLLSTEESTIEDVDMENILGETRNGL
WITKEQSVQTIEEESKGTSHMYQYEGKDYSKEPSAADQKTFEQLLDLHKMVLEEASKGGR
SLRTKSNVLLTAPLDLSIRKKRILSPEELEQRRQKRQEAAAKRAKLLSEKKQQREEEEHK
KKMAWWESHGYRSPCLPSLSSESEDESEEDGNDLPGDLDSTDTEQTSIHYVLGDVTHPMA
ADKEDAIIVHCVDDSGRWGKGGLFTALEARSDEPRKHYGRAGKMKDLSLGSVLLFPIDDK
ESRNTGQDLLALIVAQQRDRSNNLSGIKLTALEEGLQKLYRAAKKRNASVHLPRIGHTTK
GFNWYGTERLIRKYLSSRGISTYIYYFKRYSASASGSSDSADNISTKQDKANKSRTEGDA
AEQSAESSAILPDFMSGVNVYFFNISEKKRLSRYLITYNGDVDQNFCAETTHIVAQVDDS
SQMQELQSYLQENPTAVVVQARWLEVCFSKQQKVDTFSYEIKLTNSE
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgactcactttgtacaaaatcttcgcaacttactcagtaaccagccggaagagtttgaa
caagttgaggaggaggatgttaggaggtgggggttgacaggtatacgtcttcgtccatac
caacttattggtttaaattggctgattagatgccacagtattcaacatggcagcatcctt
gcagatgaaatgggtcttggtaaaacatgtcagtcaatatgctttcttctctgcctaacc
ggaagacaaaaggagaaaggtccttttttgatcctgtgcccactgtcagtactgaagaac
tggacagaagaactggcagggtttgctccacgactttcagtggttgtttacacaggagat
agggatacaagacaagctttgcaacaagacttgaaaaattgcaatttccatgtacttctc
accacttatgagatttgcttgaaagatgcttctttcctgagtagatcgaattggagtgta
ctgattgtggatgaggcccacaggttgaagaaccagaactctttactgcataagactctg
aaatcgttttcagtacgattcacactgctgctaactggaacaccagcacagaacaacctt
catgagctctattcgctgctaagctttgtggaaccaaaggtgttctcaggggatgaagtg
gatgaatttattaaatattacagcaacgtagaagaggatgcagtaaacgctaaagagttg
cacagtcttatgcatccattcctcctgagaagaattaaagctgatgttgctgcagagtta
cctaagaggatggacattattctatatcatgggatgtctgtactgcagaaaaagtattat
aaagccattctaatgaaggacttggatgcatttgagaatgaaatgggcaagaaaacacga
ttgatgaatatcttaatccaactcagaaaatgtgttgatcatccttatctttttgatggt
gtggaaccggaaccattccagattggggatcatcttgtggaagcaagtggcaaacttcac
ttactggacaaattgctagcattcctgcattccagaggtcatcgtgtgttggtgttttct
cagatggcaagaatgctggatatcttgcaggattacatggaatatcgaggttacagctat
gaacgcttggatggatcagtacgaggggaggagcgatatcttgctatcaaaaactttaat
caacacgatatttttgtttttcttttaagcacccgagcaggtggtgttggaatgaatctt
actgctgctgacactgtgatatttgtggacagtgattttaatcctcaaaatgatctccag
gcagcagcacgggctcacaggattggccagaaaaagccagtcaaaattattcggctaatt
ggaagagacaccgtcgaagaattgatttacagacgagctatgtcgaaactgaaattgaca
aacacattgattgaaggtggtcagttctctatgaaggagggagaagaattacctgcaact
tttgatatgcagttaagtgacatcctgaaatttggtctggataaattactgtctactgaa
gagagcacgattgaagatgttgatatggaaaatattttaggtgaaaccaggaatggattg
tggatcaccaaggagcaatcagtgcagacaatagaagaagagtcaaagggaacaagccac
atgtatcaatatgaggggaaagattattctaaagaacccagtgcagcagatcagaaaact
tttgagcaacttctggatcttcacaaaatggtacttgaagaagccagtaaaggaggaaga
tcactccgcacaaagtctaatgtgcttttgactgctccactggatctgtccattaggaaa
aaacgaatattgtcacctgaagaacttgagcaacggcgtcagaaacgtcaagaggcagca
gctaaacgagcaaaattactatctgaaaagaaacagcagcgagaagaggaagaacacaaa
aaaaaaatggcttggtgggaatctcatggctacagatctccctgtcttccatcgttgagt
agtgagagtgaggatgaatccgaggaggatggaaatgaccttcctggtgatctcgattct
acagatacagaacagacatccattcattatgttcttggggatgtcactcacccaatggct
gctgataaagaggatgcaataatagtgcattgtgttgatgactctggaagatggggaaaa
ggaggtttgtttacagctttggaagctaggtcagatgaaccaagaaagcattatggacga
gcagggaaaatgaaagacctttctctgggaagtgttcttctatttcccattgatgacaag
gagtcaagaaatacagggcaagacctgttagcattgatagttgcacagcaaagagatcgt
tccaacaatctttctggaatcaagctgaccgctttagaagaagggctacaaaaactttac
agagctgccaagaaaaggaatgcaagtgtgcatctcccacgaatagggcatacaaccaaa
ggatttaactggtatggcactgaaagacttattcggaagtacctttcctcgagaggcata
tcaacctacatctactatttcaaaaggtatagtgcatctgcttctggatcctccgattct
gctgacaacatatcaacaaagcaggataaagcaaacaaaagtaggactgagggagatgct
gccgaacaatccgcagaaagttcagctattctaccagatttcatgtctggtgtaaatgtt
tacttcttcaatatatcagaaaagaagaggctaagccgttatttgattacttataatggt
gatgtggatcagaatttctgtgctgaaaccactcatattgtggcacaagtggatgattct
agccaaatgcaggagttacagagctacctacaggagaatcctacagcagttgtagtccaa
gctcgatggcttgaagtttgtttctcaaaacagcagaaggttgacacattttcgtatgaa
attaaactaactaactctgagtga
DBGET
integrated database retrieval system
