Chiloscyllium plagiosum (whitespotted bambooshark): 122555445
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Entry
122555445 CDS
T08871
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122555445 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpla03041
]
122555445 (u2af1)
Spliceosome [BR:
cpla03041
]
Complex A
U2 snRNP components
U2 related factors
122555445 (u2af1)
Complex B
122555445 (u2af1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
122555445
NCBI-ProteinID:
XP_043557389
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Position
12:complement(85431319..85478779)
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AA seq
262 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNLYRNPQNCTQ
TADGFHCAVGDVEMQEHYDEFFEEVFTEMEEKYGEIEEMNVCDNLGDHLVGNVYVKFRHE
EDAEKAVNDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKSQQQGSRVTSSGDKRLLTITPKHLMAAIRHRSRSRSRERKRSRSRERGG
RAGRDRDRDRRRSKDRERSGRF
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatctggcctcgatcttcggcaccgaaaaggacaaggtcaactgttcattt
tattttaaaattggagcctgtcgtcatggagatagatgttctcgtttgcacaacaagcca
actttcagtcagaccattgcgctcttgaacttataccgtaaccctcaaaactgtacccag
acagcagacggtttccactgtgctgttggtgatgttgaaatgcaggaacattatgatgaa
ttctttgaggaggtttttacagaaatggaggaaaagtatggtgaaattgaagagatgaat
gtctgtgacaatctgggtgatcacctggttggaaatgtctatgtaaagtttcgccatgaa
gaagatgcagaaaaggctgtgaatgacctgaacaatcgctggttcaatggacaaccaatt
catgcagagctatcaccggtaactgacttcagagaggcttgttgcaggcagtatgaaatg
ggtgagtgtacacgaggaggcttttgcaacttcatgcacctcaagccaatttcacgggag
ttacgtcgtgaactgtatggacggcgtcgtaagagccagcagcagggtagccgtgtgacc
tcgtctggtgacaaacggctgctaaccatcaccccaaaacacttaatggctgctatcaga
cacaggtcaaggtcaagatctcgtgagcgtaagcgatctcggtcacgggaacgtggaggt
cgtgcaggacgggatcgagatcgtgatcggaggcgatccaaggatcgggaaagatctgga
aggttctga
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