Chiloscyllium plagiosum (whitespotted bambooshark): 122555555
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Entry
122555555 CDS
T08871
Symbol
nyx
Name
(RefSeq) nyctalopin isoform X1
KO
K08129
nyctalopin
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cpla00535
]
122555555 (nyx)
Proteoglycans [BR:
cpla00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
122555555 (nyx)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRRNT
LRR_At5g56370
Salyut
LRRCT
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
122555555
NCBI-ProteinID:
XP_043557517
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Position
12:39497205..39501057
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AA seq
490 aa
AA seq
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MCSSLPIWTTSSGQEVAMKAICPKMNVVLFVTLRASAPWACSRLCPTVCTCSAERNCVVL
CDRAGLQQVLSEFPCEASLISLEKNNIKFLSEKAFGTLPALRSLSLNHNNISFITPGAFK
GLPHLSELQLAHNEFIKYLHTRTFTNLKRLKKLDLSNCNLFNIPDRIFVAVPSLQELAMW
QNNFRRIPAAVRATETLRLLYLERNRIEAVAYNSLQGLRRLKYLNLQNNKIAVIHEKGFK
DCVELEYLYLNDNLLRNLPEFAFQELRLLKMLNLGGNALVNVSSTWFSQLVELEVLYLDR
NAISYIEEGTFENLTSLISLHLNSNNLTSLPFSVFQPVYFLGRLYVFRNPWGCDCKMEWL
KEWMENYKLVRDIPCASPPSVAGMDLSQVLFPKSSEGTCVDPVQQNETVYTPIPTQRARS
TADNRFSNLISKLLFPKMYEDAENTTEIFRNVSVPGGVNRETSTAVTINSNLDPHIQVVF
IPIIMLCYNI
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagttcacttcctatatggaccaccagctcagggcaggaggtggcgatgaaagca
atttgccccaaaatgaatgtggttttgttcgtgactctgcgtgcctctgctccctgggcc
tgctctcgcctctgtcctacagtgtgcacttgttctgctgagagaaactgtgtcgttctc
tgtgaccgagccggattgcagcaagtcctcagcgagttcccatgtgaggcctcccttatc
agtttggagaaaaataacatcaaatttttgtcagagaaggccttcggtactcttcccgcc
ctccgctctttatccttaaaccacaacaatatctctttcattaccccaggcgcatttaaa
gggctgccccatctcagcgaactccaactcgcccacaacgagtttattaagtatctgcac
actagaacgttcactaatctcaaacgacttaagaagctcgatttgtctaattgcaatcta
tttaatatcccagaccggatctttgtagcagttccctctctgcaagagttagctatgtgg
cagaataacttcaggagaatccctgcagcagtgagggccacagagactctcaggctgttg
tatctggagcggaacagaattgaagcagtggcttataactctctccaaggattacgccgt
ttgaaatatttaaatttacaaaacaacaaaattgcggtaatccacgagaaaggatttaaa
gactgcgtggaattggaatatctctatcttaatgataacctcctgaggaaccttcccgag
tttgcttttcaagaactcaggctcctgaagatgttaaacctgggaggtaatgctttggtg
aacgtctccagtacttggttcagtcagctagttgagctagaggttctctatctcgacaga
aacgccatcagttacatcgaggaagggacttttgaaaacctgaccagtttgatctcctta
catctgaatagcaataacctgacctcactgccgttttccgtttttcaacctgtatatttc
ctcggcaggctctatgtcttcaggaacccatgggggtgtgattgcaagatggaatggttg
aaagagtggatggaaaactacaaacttgtccgggacatcccgtgtgcctctccaccgtca
gtagcgggtatggatctgagtcaagtactcttccccaaatcttcagaagggacttgtgtc
gatccagtgcaacagaatgagacagtttacactccaattccgacacagcgtgcccggtcc
accgctgacaatagattcagtaaccttatctcgaaattacttttccccaaaatgtacgag
gatgcggagaacaccaccgaaatcttcaggaatgtgtcagtcccgggcggagttaaccgg
gaaacgtctacagcagttactatcaacagtaatctggatccacacatccaggttgtgttc
atacccattataatgttatgctacaatatctga
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