Chiloscyllium plagiosum (whitespotted bambooshark): 122555689
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Entry
122555689 CDS
T08871
Name
(RefSeq) transforming growth factor beta activator LRRC33-like
KO
K26317
transforming growth factor beta activator LRRC33
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122555689
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRR_5
LRR_NXF1-5
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
122555689
NCBI-ProteinID:
XP_043557648
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Position
13:complement(4931229..4965379)
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AA seq
683 aa
AA seq
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MGLRICSMSLTLTALMMLAGASLVRCLGNCTMVDMMAFCVARRLNCVPVDLPLTTEALFL
NGNEIKAIQNQSLSTYRWLHTLDLSGNQLELIEPAAFSHNKNLQDLNLMNNRIDLNYTRT
RLALRSLSALTRLDLSGNRLSEVIVSYIVQNLTTLEYLSLARNFIMRLEPSTLEGLAQLQ
ELNLENNYIYEIESGTFEGLKRLTRLNLAHNHIPCVVDFSLYRVQTLNVSHNVVELFLAR
ETETEFQLETLDLSNNKLLFFPLLPKRNKLKLLLLADNEMNFYNDLMNDSASEVQFVQIV
GNVTNVTSVNLWDEVISVNLPELQLLDMSRNSFRHLPPGFLRGITSLSALLLDQNCLKTF
SLTEQDSLLFLQAIDLSHNQLSHLNFNISRLENLNYFNLSFNHLESVPSDLFTKMPRITT
IDLSHNRVSVCDDPLGNRRRALSRGCVALAQIKSLRQLYLSNCDLVTLPPNAFVASPLTH
LDLSSNSGIRLEASMFQAVAKSLQSLSLRNNGLDSGQIGSGLQGTFGNLKTLDLSENSMT
SLHPVLKNLRLRSLDLRKNRLSALQPDVLHSLLQSLRTLSLGGNAFDCCGLEWWSFLVNA
ESLTIRDRSVITCNTSSKLEPIDRISQSTKANCKFDNTVLKYFLLLLPTVLCILSVCVMV
LFSLSSKLLPKYVKAKCRSGAQY
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggggctcagaatctgttcgatgtcactcaccctcacagctctcatgatgcttgctgga
gcgagtttggtgaggtgtctggggaactgcaccatggttgacatgatggcattttgtgtg
gcacgcaggttgaattgtgtgccagtagatctgcccttaacaactgaagcgctctttctc
aatggaaatgaaattaaagcaatccaaaaccagtcactgtctacgtacaggtggctgcac
acactggacctgagcgggaaccaacttgaactcattgaacctgcagccttttcccacaac
aagaacctgcaagatttgaacctaatgaacaacaggattgatttaaactacacaagaacc
cgactggcactaagatccctctcagcgttaacgagactggatttatctgggaatagactc
agtgaagtcatagtgagctacattgtacaaaatctaaccacactggaatatctatctctg
gccaggaatttcatcatgagattggaacctagcacgttagaggggcttgcccagcttcaa
gaattaaatttggagaacaattatatctatgaaattgaaagtgggacatttgagggtttg
aaaaggctaaccaggttgaaccttgcccacaatcacatcccgtgcgttgtagatttcagc
ttgtaccgagtgcaaacattaaatgtcagtcacaatgtcgtggaactgtttttagccaga
gagaccgagactgaattccagctggaaactctggacctttccaataacaaactgctgttt
ttcccgctcttacccaaacgcaacaagctcaaattgctgttgctggcagacaatgagatg
aatttttacaatgacctgatgaacgactcagcttctgaggtccaatttgtacaaattgtt
ggaaatgtgaccaacgttacttccgtaaatctatgggatgaggtgatttccgtaaatttg
cctgaactgcagttgctggatatgagccggaattcatttcggcacctccctcctggattc
ctccgggggataacgtcgctgtcagctctgctcctcgaccagaactgtttaaagaccttc
tcgctgacagagcaggactctctcctttttcttcaggcgatcgatctcagtcacaaccaa
ttgtcccatttgaatttcaacattagcaggctggagaacctgaactatttcaatcttagc
ttcaatcatttagaatcggtgccttcagatctttttacgaagatgcctcggattacaaca
atagacctcagtcacaacagggtctctgtttgtgacgatcctttaggaaataggaggagg
gctttgagcagaggttgtgttgccctggcgcagatcaaatcgttgcgacaactttatctc
tccaactgtgacttggtcacactacctcccaatgcttttgtggcttcgcccttaacccat
ctggatttatcatccaattcgggaatccgactggaagcgagcatgtttcaagccgtggcc
aagtcattgcaatccttatctcttaggaacaatgggttagattctggccagatcggttct
gggttgcaagggacttttggcaacctaaagactttggacttgtctgagaattccatgaca
agcctacatcctgtcctcaaaaaccttcgcctgagatcgctggacttacggaagaacagg
ttgtctgcgcttcagccagacgtgctgcacagcctgttgcaaagtcttcgaactttgtcc
ctgggcggcaatgcctttgactgctgcgggttggaatggtggagcttcctcgtcaacgcc
gagtcactgaccattcgcgatagatctgtgatcacttgcaacacgtcttccaaactggag
cccatcgacaggatttcccagtcgaccaaagctaactgcaaatttgacaacactgtttta
aaatacttcttgctgttgctgccgacagttctgtgcatcctcagtgtttgtgtgatggtt
ctattctctttgagttccaagttgttgcccaagtatgtcaaagccaaatgcaggtcgggg
gctcagtattag
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