Chiloscyllium plagiosum (whitespotted bambooshark): 122555694
Help
Entry
122555694 CDS
T08871
Symbol
atg4b
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04136
Autophagy - other
cpla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122555694 (atg4b)
04136 Autophagy - other
122555694 (atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpla01002
]
122555694 (atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122555694 (atg4b)
03029 Mitochondrial biogenesis [BR:
cpla03029
]
122555694 (atg4b)
Peptidases and inhibitors [BR:
cpla01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
122555694 (atg4b)
Membrane trafficking [BR:
cpla04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
122555694 (atg4b)
Mitochondrial biogenesis [BR:
cpla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122555694 (atg4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
122555694
NCBI-ProteinID:
XP_043557657
LinkDB
All DBs
Position
13:complement(5073823..5155074)
Genome browser
AA seq
453 aa
AA seq
DB search
MTTPTRGAVRCSQRCEPIGRWRLSISGAGWMPSSVIVDGAQWMQKTLGKVFHRTLVSRIK
VHATLTYDTLRFGDFEDFPETTEPVWILGTKYSALTDKDEIFSDVTSRLWFTYRKNFSPI
GGTGPTSDNGWGCMLRCGQMIFAQALICRHLGRDWRWVNGKQQRDEYYNILNAFLDKKDS
YYSIHQIAQMGVGEGKSIGQWYGPNTAAQVLKKLTFFDNWSSLAVHVAMDNTVIIDDIKM
LCKSESPCAGAAAAAFPPSVGQRRFNGYPSGANCSEDTLAWKPLVLLIPLRLGLSEINEA
YIKTLKKCFMMPQSLGVIGGKPNSAHYFIGYVDDELIYLDPHTTQPAVEPFDDFSIPDES
FHCQHPPCRMSICDLDPSIAVGFFCSTEEDFNDWCKRMKMISQEKDALLMFELMDYQTAR
FPDVHCLTPDFTDSERLERFFDSEDEDFEILSL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcctacccgaggggcggtgcgttgttcgcagcgctgtgagccgattggtcgg
tggcggctgtcgatcagcggtgcggggtggatgccaagctccgtgatagtggatggtgca
caatggatgcagaagactcttggtaaggtcttccacaggacgttggtcagcagaattaag
gtacatgctactctaacgtacgacaccttgaggtttggcgattttgaagattttccagaa
acaacagagccagtttggattttaggaacaaaatacagtgcactcacagataaagatgag
atcttttcagatgtcacctcacggctctggtttacatacaggaagaatttctctcccatt
ggtggcacaggaccaacctctgataatggctggggttgcatgttgcgatgtggtcaaatg
atctttgctcaggcgctcatatgcagacatctgggtcgagattggagatgggtaaatggg
aaacagcaaagagatgaatattataatatattgaatgcttttcttgacaaaaaggacagc
tactactccattcatcagatagctcaaatgggagttggagaaggaaagtcgattggtcag
tggtatggtccaaacactgcagcacaagtattgaagaaactcacattctttgacaactgg
agctcgttagcagttcatgtggcgatggataacacagtaataattgatgacatcaagatg
ttgtgcaagtctgagagtccgtgtgcgggggcagcagcagcagcattccctccatctgtt
ggtcaaaggcgattcaatgggtatccatcaggtgcaaattgctcagaagacacattagcg
tggaaaccactagtgttactaatacctctaaggttgggactcagcgagatcaatgaagca
tacatcaaaacattgaagaaatgcttcatgatgccacaatctcttggagtcatcggtggc
aaacccaacagtgctcattatttcatcggatatgtagatgatgagttaatctaccttgat
ccacacacaacacagcctgcagtggagccatttgatgatttctctataccagatgagagt
ttccactgtcaacatcctccttgtaggatgagcatctgtgacttggacccatccatcgct
gtgggctttttctgcagcacagaggaggattttaacgactggtgtaaacgaatgaaaatg
atttcacaagagaaggatgcgttactgatgtttgaattgatggattatcagactgctcgc
ttcccagatgtccactgtcttactcctgattttacagattctgaaagactggaacgattc
tttgattctgaagatgaagattttgaaatcctctcattataa
DBGET
integrated database retrieval system
