Chiloscyllium plagiosum (whitespotted bambooshark): 122555711
Help
Entry
122555711 CDS
T08871
Name
(RefSeq) histone deacetylase complex subunit SAP130-like isoform X1
KO
K19192
histone deacetylase complex subunit SAP130
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122555711
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
122555711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP130_C
Motif
Other DBs
NCBI-GeneID:
122555711
NCBI-ProteinID:
XP_043557692
LinkDB
All DBs
Position
13:5779110..5835999
Genome browser
AA seq
1085 aa
AA seq
DB search
MSTQQFPRPSAPTSGLGAGQSSVTSMQNSSGPGVSGNNAVTAPNEEMNRDVEHLPREHSN
PIPSLPFRDEKQETVVVRPYPQVQTHAQPLPAAQHHLQQSGVPVTLGAPPTHLTQGTQLS
FPEGLMKTTLKPPLPSRPIAPAPSSGLGHLAVPPKVSGHVPVSMDASVAQASAIPVATIS
GQQGHPNIPHLMGTNVQMSIIRNSVPASLHIGPSTAQPQMFSSHVPRGAAVAAAISSSKV
TTVLRPAPAPLPTAGNPQTAVQHSLHLPIQSRPPSTTSTAIPPAVVATVSATRAQSPVIT
TAAAHGTDVAHSRPALTIQPHPSAATISIQRTQQSRDTTARITLPSHPAVAAQKPQLHIT
QKTMFSTGTPVAAATVAPILSTNSIPSTTSQGAVSHAQVTSSTIVNMTMASHTPHAPVVT
TSTIPVAKVVPQPITHTSPRIQPDYTTERGNLIPIPGHRASPNPVTMETRTENRQVSMQF
QYYLPAYPPSAAIPGYSTLAHTFPISSTVSTIRQYPVSAQTQSSVSAAAIAAQAGVGVAS
TVHLNPMQLMTVDTTHARHIQGLQPASIGAQGLQPTSIGPQGIQPAPLGTQGIQSTSIST
QAMQPAPLGPQQTTENKPPVVLADGATIVANPISTFSATPAVTTVIQTHTQSSSTTAPAQ
GSSPRPSILRKKPACDGLAVRKSLIPPQPTETTSPRLDGTMRTASGSPRPVGSKSKPEIH
VSMTAPVAVAMEAVSSQSMEQMSVLGQPNSQQPQPPIPTLIAAAAPHAQPTALSTVTAAV
SATPSSSVSMATVVAPPSQPVAISVPVSMSSALPDSKIKQESELVDSLQPVSVTVSSSQP
MSVSSAALTPMVNNLGLPGNELLPGASPRKKPRKQQHVISTEESEMMETNSTDEEKNSSS
KPVLLKAEKRKSPPKEYIDEEGVRYVPVRPRPPVTLLRHYRNPWKAAYHHFQRYSDVKVK
EEKKPTLQEIANQKGIVCKAQGWKVHLCAAQLMQLTSLEHDVYSRLASLQEGLIPKKKAA
ADDDMHRINELIQGNMQRCKLVIDQITEAKDTMMKVLDHKDRVLKLLNKNGTVKKVSKLK
RKEKS
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcaacagtttccacgacctagcgcacccacatcaggcctgggagcaggtcag
tcttccgtcaccagcatgcagaacagcagtggtccgggggtgtcaggcaacaacgctgta
acagcccccaacgaggagatgaatcgggatgtggagcacttgccccgtgagcattctaat
ccgatcccttcacttccattccgagatgagaaacaggagactgttgtggttcggccttac
ccacaggtgcagactcatgcacagccgctaccagctgcacagcaccatctacagcagtct
ggggtgcctgtaactctgggtgctcctcccacacacctcacacaaggcacccagctctcc
ttccctgaaggactaatgaagaccaccctgaagccccccttgcccagtcggcccattgct
ccggctccgtcatctggccttggacatttggctgttcctccgaaggtttcaggacatgtg
cctgttagcatggacgcgagtgtagcgcaggcctctgcaatccctgtggcaacgattagt
gggcagcaggggcatcctaacatccctcatctgatgggtaccaacgtgcaaatgtcaatc
atccgaaactctgttccagcttcgctccatattggaccttccacagcacagccacagatg
ttctcatcgcatgtgccaagaggtgcagcagtagcagcagcaatatcgagttccaaagta
actacagttttgcgtcctgctccagcaccattaccaacagctggaaatcctcagactgct
gtgcagcattctctgcacctacctatacagtctcgtcctccttcaaccacctctacagca
attcctccagcagtggtagcaacggtatctgcaacacgagcccagtctccggtcattaca
acagctgcagctcatgggacagatgtggcacacagtcgaccagcgctgaccatccaacct
cacccatctgctgctacaattagcatccagcgcacacagcagtccagggatacaacagct
cgaattacattaccttcccaccctgcagtggctgcccagaaaccacagctccacattaca
cagaaaacaatgttcagtaccgggacgccagttgctgctgccactgtggcacccatactc
tccacaaattcaatcccctctactacaagtcagggtgcagtttcccatgctcaagtgacc
agcagtacaattgttaacatgacaatggcctctcacacaccacacgctcccgtggtcacc
acttctactattccagtcgcaaaagttgttcctcaaccaataacccacacgtccccacgg
atccagcctgactatacaacagaaagaggaaacctgatccccatccctggtcacagggcc
tcgcctaaccctgttaccatggaaacacgaactgagaacagacaagtatctatgcagttc
cagtattatctgccagcttacccaccatcggctgccattcctggctactcaacactggca
catacctttccaataagcagtacagtgtctacaatacgccagtacccagtttcagcacaa
acacagagttccgtgtctgcagcagccattgcagctcaggcgggtgtgggtgtggcctcc
actgtccatctgaaccccatgcagctgatgacagtcgacaccacccatgcacgtcacatt
caggggcttcagcctgcgtcaattggtgcccagggccttcagcctacttcaatcggtccc
caagggattcagccagctccactggggacacaggggattcagtcaacatctatcagcact
caagctatgcaacctgcaccacttggccctcaacagaccactgagaacaaaccaccagtg
gtgctagcagatggagccaccatagtagcgaatcctatcagcactttcagtgcaacgcct
gctgtgaccacagtgatccagacccacactcagagcagcagtacgactgcaccagcacag
ggatcgtctccgcgacccagcattctacgcaagaagcctgcctgtgatggcttggctgtc
cggaaaagcctcattcctccacagccaacagagactacaagccctcgactagatggcacg
atgcgaactgcatcgggatccccacgaccagttggttccaaatccaaaccagaaatccac
gtttccatgactgcgccagtggctgtcgccatggaggcggtcagcagccagagtatggag
caaatgtctgtgctgggacagccaaattcccagcagcctcagccaccaatcccaaccctc
attgcagcagcagcccctcatgctcaaccgactgcgttgtcaactgttacagcggctgtc
tcagccacgccttcaagctcagtctccatggccacagtggtagctcctccgtcacagccg
gtcgccatttctgttcctgtctccatgagctcagcattaccagattctaaaatcaaacaa
gagagcgagcttgtggactcgctgcagccagtgtctgttacagtctcgtcatcacagccc
atgtcagtgagctcagctgctctgactccaatggtaaacaaccttggtcttcctggtaat
gagctgctgcctggtgcatcccctcggaagaaaccccgcaaacagcagcacgtcatctcc
acagaagagagtgaaatgatggaaacaaacagcacagatgaagaaaagaacagcagtagc
aagccggttctcctcaaagcagagaaaaggaaatcacctcccaaagaatatatagatgaa
gagggtgtgaggtacgttcctgttcgccctcgacctccagttacattgcttcgtcattac
aggaacccttggaaggcagcataccatcatttccagagatacagtgatgtgaaagtcaaa
gaggagaagaagcccacattgcaggagatagccaatcagaaaggaattgtctgcaaggcc
cagggttggaaagtgcatctctgcgctgcacaactcatgcagctgacaagtttggaacat
gatgtgtacagccgcttggcttcattacaagaaggactgattccaaagaagaaggcggct
gcagatgatgacatgcatcgaatcaatgagctgatccagggaaacatgcaacgctgcaaa
ctggttattgaccagatcaccgaggccaaagataccatgatgaaggttctggatcataag
gatagagttctgaagctcctcaacaaaaatggcacagtcaaaaaagtgtctaaattgaag
aggaaagaaaagtcctaa
DBGET
integrated database retrieval system
