Chiloscyllium plagiosum (whitespotted bambooshark): 122555765
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Entry
122555765 CDS
T08871
Name
(RefSeq) uncharacterized protein LOC122555765 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04136
Autophagy - other
cpla04140
Autophagy - animal
cpla04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122555765
04136 Autophagy - other
122555765
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122555765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122555765
03029 Mitochondrial biogenesis [BR:
cpla03029
]
122555765
Membrane trafficking [BR:
cpla04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
122555765
Others
Rab GTPases of specific organelles
Auto phagosome
122555765
Mitochondrial biogenesis [BR:
cpla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122555765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
HTH_Tnp_Tc5
CENP-B_N
Herpes_BLRF2
KASH_CCD
V_ATPase_I
Syntaxin-6_N
Fez1
HALZ
HTH_28
EXOC6_Sec15_N
Phage_GPO
HAUS-augmin3
DUF4472
RACo_linker
HTH_23
DUF641
Motif
Other DBs
NCBI-GeneID:
122555765
NCBI-ProteinID:
XP_043557816
LinkDB
All DBs
Position
13:complement(11732674..11752719)
Genome browser
AA seq
603 aa
AA seq
DB search
MAARSPNSCPTCRLFGNLGTLKSDNSSVFSISIPGLQSLAFVRFLPRRLNRQTIGKLGAA
VCGRTPGKMAERERLERQSLGALFGAYGKLLDKCDLQAALTDRLRVEKCDLQTIRPALQG
TPNEILLQKGTQTWIQQQDELMEFHKNRGDLTQSMIELNSRLQQKDREILTNEAKMVEYH
KRIKRLEVECQELRTNLQDLERANHVLKNEYNTLHITFSTLEERLQKMADENRELITRWM
SEKTQDTNRLSTENEKDSRYSFTVQNLIAASFCGRPFILLGGIGTLPMMPTNHKRTDLPL
AEKVKVVMALQGPKVSYASVAKMFNISKSQVGRISQNRERILEEWRQNANPNRKRKRKGK
DIEVEDALLLWFQHAVAEGVRISGPMLKTKAKEFAEELHHNDFEPTDGWLSRWKARNNIV
FKKDSNERHDCDGSVANGLTPERPEAEARVTDIGHNVTLLDAIQMLYRAYGGMEQTPCAD
SHHGDKLKKHAICLGPRIPGGDLDSANFCPHLLPAKQEEPPGLQPKSEDSCVTTKRPRLE
IKVQEREVDRRSRSIAPVITNNEVLECVSKLGNWLQLQGPSGVYEPMLCMLRDMQTAVAT
FLR
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacgaagcccaaatagttgtccaacctgccgcctgtttggaaatttgggtact
ttaaaaagcgacaactcttcagttttttctatctcaatcccggggctgcagtctctagct
tttgtacgattcttgccccgacgcctcaacaggcagacaatcgggaagctcggcgccgct
gtgtgtggaaggaccccggggaagatggcggagcgggagcgattggagcggcagtcgctg
ggagcgctgtttggggcctatggtaagctgctggacaaatgcgatctgcaggcagctctg
accgacagacttcgagttgaaaaatgtgacctccagactatcagaccagccctgcagggg
acaccgaatgaaatactgctgcaaaaaggcactcagacctggattcagcaacaggatgag
ttgatggagtttcacaaaaatcgcggagatctcacacaaagcatgatcgaactcaatagc
agactgcagcaaaaagatagagaaatcttgaccaacgaggcaaaaatggtggagtaccac
aaacggattaagaggctggaggtggaatgccaggagctgcggactaacctgcaggacttg
gagcgagccaatcacgtactgaaaaatgaatacaacactctccacatcacattcagcacc
cttgaagaacgactgcagaagatggctgatgagaaccgtgagctaatcacacggtggatg
agtgagaaaacacaggacacaaacaggctgagtacagagaatgaaaaggactccaggtac
tcattcactgtacaaaatctcattgctgcttctttttgtggcagaccatttatcctcctg
ggaggaattggaaccttgcccatgatgccgacgaatcacaagcgcacggatctgccgctt
gctgagaaggtgaaggttgtcatggctctgcaaggcccaaaagtctcctacgcctcggtg
gccaagatgttcaacatctccaagagccaggtgggacgcatcagccagaacagggagagg
atcctggaagaatggcgacagaacgccaatcccaatcgcaagaggaagaggaaggggaag
gatattgaggtggaggacgctcttctcttgtggttccagcatgctgtggctgaaggagtc
cgcatctctggccccatgctaaagacaaaggccaaggagtttgcggaggagctacatcac
aatgactttgagccaactgatggatggctctcgcgatggaaagctcggaacaacattgtc
tttaagaaggactccaacgagcggcacgattgtgatggctctgtagcaaatgggctgact
cctgagagacctgaagccgaggccagagtcactgatattggccacaatgtgaccttgctc
gatgcaatccaaatgctgtatcgggcctatgggggcatggagcagactccctgtgctgac
tcacaccatggagacaagttgaaaaagcatgcaatctgtctgggtcccagaatccccggg
ggcgaccttgactcggctaatttctgtcctcacttgctcccagcaaaacaggaggagcct
cctggcttgcagcccaaatctgaggacagttgtgtgacaaccaagaggccccgcctggag
atcaaagtgcaagagcgtgaggttgacagaaggtcacgaagcatagcccctgtcatcacc
aataacgaggtgttagagtgtgtgagcaagctgggaaactggcttcagctgcaaggaccg
tcgggagtttacgagccaatgctgtgcatgctacgggacatgcagactgcagtggcaact
ttcttgaggtag
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