Chiloscyllium plagiosum (whitespotted bambooshark): 122555796
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Entry
122555796 CDS
T08871
Name
(RefSeq) cohesin subunit SA-1 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122555796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122555796
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
122555796
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
122555796
NCBI-ProteinID:
XP_043557875
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Position
13:18251482..18365477
Genome browser
AA seq
1265 aa
AA seq
DB search
MITPELPVLQEPTNETTIHSDVTGEFDDPEGKGRKRRARGPGRPPTAKKARRIPGEKSRV
GTGGRTSLGKANGHHQQNGDIEPVTLFEVVKMGKSAMQSVVDDWIESYKQDRDIALLDLI
NFFIQCSGCKGTVRIEMFRNMQNTEIIRKMTEEFDEDSGDYPLTMPGPQWKKFRSNFCEF
IGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLS
IHQDNTQRQYEAERNKMIGKRANDRLELLLQKRKELQENQDEIENMMNSVFKGIFVHRYR
DAISEIRAICIEEIGVWMKSYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYTNK
ELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILQLHDCYRGSEEALSNEDCEN
VYHLVYSAHRPVAVAAGEFLNKKLFSRHDPQAEEAYAKSRGRHSPNGNLIKMLVLFFLES
ELHEHAAYLVDSLWESSQELLKDWECMVELLLEEPIQGEEGMTDRQETALIELMVCTIRQ
AAEAHPPVGRGTGKRVLTAKERKMQIDDRTKLTEQFIVALPMMLGKYSADSEKVANLLQI
PQFFDLELYSTGRMEKHLDALLKQTKFVVEKHIESDVLESCSKTYNILCSDEYTIQNRVN
IARSQMIDELVERFSQSVEDLLQEGEEADDDDIYNVLSTLKRLTAFHNAHDLTKWELFGN
CYRLLKSGIELGSMPEQIVVQALQCCHYSILWQLVKIAEGSPTKDEQLGLRKTLKAFCIV
CQHCLTNVNPSVKEQAFMLLCDLLMIFSHQLTTGGRDGLKPIVYSPDTGLQSELLSFVMD
HVFIDQDEENQSMEGDEEDEANKIEALHKRRNLLAGFCKLIIYDVVDMNAAADIFKHYMK
YYNDYGDIIKETLSKTRQIDKIQCAKTLILSLQQLFNELVQEQGPNLDRSSAHVSGIKEL
ARRFALTFGLDQIKTREAVATLHKDGIEFAFKYPNPNGPEYPPPNLAFLEILGEFSSKLL
RQDKKTVHAYLEKFMSEQMMERREDIWLPLISYRNSLLTGGEDDRMSVISGGSSSKASSI
RSKKGRPPLNKRRTEEENVDNSWMNRNDAVQTPGVLHPPQLTSTVMRENPRQPAEHNMED
QESERGSESDYVQNPQMQMPWLGQHKLEEAHRKDRVAMNYMKARGGVRQSVRSHSLMEDD
AEPIFEDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSTAIMEDDSGF
GMPMF
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgatcactccagagttaccagtgttacaggagccaactaacgaaacgactattcattct
gatgttactggtgaatttgatgatccagaggggaaaggacggaagcgcagagctcgtggt
cctggcaggccaccgactgctaagaaggcaaggcgtattccaggagagaagagtcgagtc
ggaacaggtggtagaacaagtttgggaaaggctaatggacaccatcaacaaaatggagac
attgaaccagtcacactttttgaggtggtgaaaatgggcaagagtgccatgcagtctgtg
gttgatgactggatagaatcgtacaaacaggatagggacatcgcacttttggacctaatc
aattttttcatccagtgctcaggatgtaaaggcactgtaagaattgagatgtttcgaaat
atgcagaatacagaaataattaggaaaatgactgaagagtttgatgaggacagtggagat
taccctctaactatgcctggtcctcaatggaagaaattccgatcaaatttctgtgagttt
attggagtgctcatccggcaatgtcagtacagtattatttatgatgagtacatgatggat
acagtgatttctctcctaactgggctttcagattcacaagttcgagccttcaggcacacc
agcaccttggctgctatgaagctgatgacagcattggtgaatgtggccttaaacttaagt
atacatcaagataacacacaaagacagtatgaggctgagaggaacaaaatgataggcaaa
cgagctaatgacagattggaattgctgttacaaaaaagaaaggagcttcaagaaaatcaa
gatgagatagaaaacatgatgaattctgtttttaagggtatatttgtacacagatatcgt
gacgcaatttcagagattcgagctatctgtattgaagaaattggtgtatggatgaagagt
tacagtgatgcctttctcaatgacagttatttaaagtatgtgggatggacactacatgac
cggcaaggtgaagtgaggctgaaatgtcttaaagctctgcagtcactgtacactaataag
gaactcttcccaaaactggaactcttcaccaataggttcaaggatcgtattgtatccatg
acattagacaaagagtatgacgttgctgtggaagctattcgattggtcactttgatattg
cagcttcatgattgttataggggaagtgaggaggcattatccaatgaagattgtgagaat
gtgtatcaccttgtatattctgcacatcgtcctgttgctgtggcagctggggaattccta
aataaaaagttgttcagtcgacatgatccacaagcagaagaagcctatgctaaaagtagg
ggaaggcatagtccaaatggaaatcttattaagatgttggtacttttcttcctagaaagt
gagttgcatgagcatgctgcctacctggtggatagtttatgggaaagctcccaagaactt
ctcaaggattgggaatgtatggtggaactgctgctggaagagcctatacaaggggaagaa
ggtatgactgacaggcaggaaactgcacttatcgagcttatggtgtgtacaattcggcaa
gctgcagaagcacatcctccagttgggagaggaacaggcaaaagggttttgactgcaaag
gagagaaaaatgcagatagatgatcgcactaaattgacagaacagttcatagtggcactt
ccaatgatgttaggaaagtactcagctgattctgagaaagtggcaaatctgttgcaaatc
cctcagttctttgacttggagctgtacagtacaggaagaatggaaaagcacctcgatgca
ttgctaaaacaaaccaagtttgttgttgaaaagcacatagagtcagatgtcttagaatca
tgcagcaaaacatataacatcctgtgtagtgacgaatacacaattcagaaccgtgttaac
attgcacgcagtcagatgattgatgagctggtagagcgattcagtcagtcagttgaagac
ttattacaggagggagaagaagcagatgatgatgacatttataatgttctctctactttg
aagaggttaactgccttccacaatgctcacgatcttacaaaatgggaactgtttggaaac
tgctacaggcttttaaaaagtgggattgaacttggatctatgccagaacagatagtggtc
caggcgctccagtgctgtcactactccattctgtggcaacttgtcaaaatagctgaaggt
tctccaactaaggatgaacaactaggattgagaaaaacattgaaagcattttgtattgtc
tgtcagcactgtttgacaaatgtcaacccatctgtcaaagagcaggcattcatgttgctt
tgtgatctgttaatgatattcagtcaccaattgacaactggtggcagggatgggctcaag
ccgattgtttacagcccagatactggactgcagtcagagttgctcagctttgtaatggat
catgtatttattgatcaagatgaggagaaccaaagcatggaaggagatgaagaggatgaa
gccaacaagattgaagcccttcataaaagaagaaacctcttggcaggcttttgcaagctt
ataatttatgatgttgtggatatgaatgctgctgctgacattttcaagcattatatgaag
tattacaatgactatggagacatcataaaggaaacgttaagtaaaaccagacaaattgac
aaaattcagtgtgccaagacacttattctcagtttacagcagctcttcaatgagcttgtc
caggagcaaggtccaaatcttgacaggtcatcagcccatgtcagtggtattaaagaactt
gctcgtcggtttgccctcacttttggtctggatcagatcaagacgagagaagctgttgct
actttacacaaggatggcatagagtttgcttttaaatatcctaacccaaatggaccagag
taccctccaccaaatcttgccttccttgagattcttggtgaattctcctctaaacttctg
cgccaggacaaaaaaactgtccatgcatacctggagaaattcatgtctgagcagatgatg
gaacgaagagaggatatctggctgcccctgatctcctatcgcaactcattacttactggt
ggggaggacgataggatgtctgtgattagtggaggcagcagtagtaaagcttcctcaata
cgtagtaaaaaagggcgtccaccacttaacaaaaggaggaccgaagaggagaatgtggat
aattcatggatgaacaggaatgacgctgttcaaactccaggagtcctgcatccaccacag
ttgacttcaacagtcatgcgggaaaatcctcggcaaccggcagaacacaacatggaagat
caggaatctgaacggggctccgaatctgattatgtacagaaccctcaaatgcaaatgcct
tggttgggtcaacacaagcttgaagaggcacaccgaaaagacagagtggccatgaactac
atgaaagcacgaggtggtgtaaggcaatcagtccgcagtcacagtttaatggaggatgat
gctgaaccaatttttgaagatgtaatgatgtcatcaaggggtcagttggaggatatgaat
gaagaatttgaagacactatggttattgatctgcctccgtcacgaaacagacgtgaacga
gctgagctcagaccagatttcttcgactctactgccataatggaagatgattcgggcttt
gggatgcctatgttctga
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