Chiloscyllium plagiosum (whitespotted bambooshark): 122555850
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Entry
122555850 CDS
T08871
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122555850 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cpla01007
]
122555850 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpla03016
]
122555850 (farsb)
Enzymes [BR:
cpla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
122555850 (farsb)
Amino acid related enzymes [BR:
cpla01007
]
Aminoacyl-tRNA synthetase
Class II (U)
122555850 (farsb)
Transfer RNA biogenesis [BR:
cpla03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122555850 (farsb)
Prokaryotic type
122555850 (farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
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GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Glyco_hydro_77
Motif
Other DBs
NCBI-GeneID:
122555850
NCBI-ProteinID:
XP_043557989
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All DBs
Position
13:complement(25282312..25346520)
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AA seq
589 aa
AA seq
DB search
MPTVSVKRDLLFEALGQVYTDEEFDALCFEFGLELDEVTSEKEIISREQGDGKAEGASDM
ILYKIDVPANRYDLLCLEGLTRGLQVFKDRIEAPKYTRVGPPSGDMQKLIITKETAQVRP
HAVAAVLRNIKFTKDRYDSFIDLQEKLHQNICRKRALVAIGTHDLDTLVGPFTYTAKPPS
EIKFKPLNQSKEYTASEIMDLYKTDSHLRHYLHIIEDKPVYPVIYDSNGIVLSMPPIING
DHSKITLNTQNVFIECTATDRTKAKIVLDMIVTMFSEYCEKSFTVEAAQVIYPNEETCIY
PEMRYRKEILSADFINKHVGVTETPESIAKLLSRMYLKSKVIGNGEEIEIEIPPTRADII
HPCDIVEDAAIAYGYNNIKMTVPKAYTVANQFSLNKLAELLRQDMAAGGFTEALTFALCS
QDDIAGKLGKDISETKAVHIANPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISD
VVLKDSSKDVGARNSRRLCAVYYNKNPGFEVIHGMLDRVMQLLELNPEKENGYYIQAVED
STFFPGRCAEIFAKGQSIGKLGVLHPDVITKFELTMPCSTLEIDIEPFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgtcagtgtgaagagggatttgctgtttgaagctttgggtcaagtatacact
gatgaagagtttgatgcactatgttttgagtttggtttggaactggatgaagtgacatct
gaaaaggaaattataagcagagaacaaggagatggaaaagcagagggtgcatccgatatg
atattgtataaaatcgatgttcctgccaaccgttatgatctcttgtgcctggaaggattg
acccgtggtttgcaggtctttaaagacagaattgaagctccaaagtacacaagagtgggg
ccacctagtggagacatgcagaaattaattatcaccaaagagactgcacaagttcgccca
catgctgtagcagctgtccttcgtaacattaagtttaccaaggatcgctatgacagtttc
attgatctacaggagaagctgcatcaaaacatttgcaggaagcgagctttggttgcaatt
ggaacccatgatctggacacactggtaggaccttttacctatactgcaaaaccaccttct
gaaattaagtttaaacccttaaaccagtcaaaggaatacactgcttcagaaataatggat
ctttacaagacggacagtcaccttcgccattatttgcacatcattgaagataaaccagtt
tatcctgttatctatgatagcaatggcatcgtcctttctatgccacctattataaatggc
gatcatagtaaaataacactcaacacacaaaatgtttttattgaatgtacggcaactgat
cgcacaaaagcaaaaatagtgctggatatgattgtcacaatgtttagtgagtactgtgag
aaatcatttacagttgaagcagctcaggtaatatatccaaatgaagaaacatgcatttac
ccagagatgaggtatagaaaagaaattctaagtgcagattttattaacaagcatgtagga
gtcactgaaacacctgaatctattgctaaactgctgagtcggatgtacttaaagtccaag
gtaataggaaatggagaagaaatagaaattgaaattccccccacaagggcagatatcatc
catccatgtgacattgtagaagatgcagcaatagcctatggttacaacaatatcaagatg
accgttccaaaagcatacactgtagctaatcagttctcgttgaacaaattagctgagttg
ctgaggcaggacatggcagctggtggattcacggaggccttgacctttgccctgtgttcg
caagatgatattgctggcaagctgggcaaggacatatcagaaacgaaagcagtacatata
gccaatcctaaaacagctgaatttcaggtggctcgtaccaccctgctccctggtctgctg
aagacaattgcagccaatagaaagatgccactgcctctgaaattatttgaaatttctgat
gttgttctgaaagattcttccaaagatgttggtgcaaggaactccagacgcctctgtgct
gtgtactacaataagaatcctggctttgaagtgatccatggcatgttggaccgtgtaatg
caactacttgaattgaatccagaaaaagagaatgggtactacattcaggcagtagaagat
tccactttcttcccgggtcgatgtgccgagatctttgctaaaggtcagagcattggcaag
ctgggagttcttcaccctgatgttatcaccaaatttgaactgaccatgccctgctccact
ctcgaaatcgacattgagccctttctttaa
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