KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122555936
Entry
122555936         CDS       T08871                                 
Symbol
tbl1xr1a
Name
(RefSeq) F-box-like/WD repeat-containing protein TBL1XR1a
  KO
K04508  transducin (beta)-like 1
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    122555936 (tbl1xr1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cpla03036]
    122555936 (tbl1xr1a)
Chromosome and associated proteins [BR:cpla03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    SMART complex
     122555936 (tbl1xr1a)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_Aladin WDR55 WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_IFT122_1st NBCH_WD40 WD40_RFWD3 Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st Beta-prop_WDR41 eIF2A Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_SPT8 LisH Beta-prop_DCAF12 Beta-prop_EIPR1 WD_LRWD1 Beta-prop_HPS5 Beta-prop_ACSF4 Tricorn_2nd B-prop_COPA_B_2nd RMC1_N Beta-prop_WDR75_2nd Beta-prop_NWD2_C PD40 K_channel_TID
Other DBs
NCBI-GeneID: 122555936
NCBI-ProteinID: XP_043558164
LinkDB
Position
13:complement(38712928..38752537)
AA seq 513 aa
MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLQQQQAAAAAAAAAVSQQ
GAAKNGENTANGEENGGHTVTNNHTDMMEVDVDVDIPSNKAMVLRGHESEVFICAWNPVS
DLLASGSGDSTARIWNLSENSSGGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLA
TGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAK
QQFPFHSAPALDVDWQNNNTFASCSTDMCIHVCKLGADRPIKTFQGHTNEVNAIKWDPTG
NLLASCSDDMTLKIWSMKQDACVHDLQAHNKEIYTIKWSPTGPGTNNPTANLMLASASFD
STVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYR
GTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgagtattagcagtgatgaggtcaactttctggtatatagatatttgcaagagtctggt
ttttcccattcagcattcacgtttggtatagagagtcacatcagtcagtccaatattaat
ggtgcccttgtgccaccagcagctctcatctcgatcatacagaaaggtttgcagtatgtg
gaggccgaagtcagtatcaatgaggatggcacactatttgatgggcgacccattgagtcc
ctttctttaattgatgctgtaatgcctgacgtggtgcaaacaaggcagcaagcttataga
gacaagttgcagcaacaacaagcagcagcagccgctgctgcagctgcagtcagtcaacaa
ggggctgcaaagaatggagagaatactgcaaatggagaggagaatggaggacacacagtg
actaataaccatacagatatgatggaagttgatgtagatgtggatataccatccaataaa
gctatggtattgcgtggacatgaatcagaggttttcatatgtgcctggaatccagtcagt
gatctcttggcatctggatcaggagactcaacagcacggatatggaatcttagtgaaaat
agtagtggtggccccactcagctcgtacttaggcactgcataagggaaggagggcaagat
gtaccaagcaacaaagatgtcacatctttagactggaatagtgaaggcacacttctagca
acaggttcgtatgatggatttgcaagaatatggacaaaagatggtaaccttgctagtacc
ttgggtcagcacaaaggacctatatttgcattaaaatggaacaagaaaggaaattttatc
cttagtgcaggagtggacaagacaactattatttgggacgcacatactggagaggccaag
cagcagttccctttccactctgctccagcactagatgttgactggcaaaataataacaca
tttgcctcttgcagcacagacatgtgcatccatgtctgtaaattaggtgcagacaggccc
atcaagacattccagggacacacgaatgaagtaaatgcaatcaagtgggatccaacaggg
aatctacttgcatcttgttctgatgacatgaccttgaagatctggagtatgaagcaagat
gcatgtgttcatgatttacaagcgcacaacaaggaaatctatactattaagtggagtcct
acaggacctggtactaacaatccaactgccaatcttatgttagcaagtgcttcatttgat
tccactgtacggttatgggatgtggaccgaggtatctgcatccatactttgaccaaacac
caggaacctgtatacagtgtagcattcagcccagatggcaggtacttggctagtggctcc
tttgacaaatgtgttcacatctggaacacacagacaggtgctcttgtccatagctacagg
ggaacaggaggcatctttgaagtgtgctggaatgcagctggggataaagtgggtgcaagt
gcatcagatggttcagtttgtgtgttagacctgcggaaatag

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