Chiloscyllium plagiosum (whitespotted bambooshark): 122555944
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Entry
122555944 CDS
T08871
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpla01002
]
122555944 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122555944 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpla04147
]
122555944 (usp13)
Enzymes [BR:
cpla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122555944 (usp13)
Peptidases and inhibitors [BR:
cpla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122555944 (usp13)
Ubiquitin system [BR:
cpla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122555944 (usp13)
Exosome [BR:
cpla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122555944 (usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
UBA_9
UBA_3
UBA_8
Motif
Other DBs
NCBI-GeneID:
122555944
NCBI-ProteinID:
XP_043558174
LinkDB
All DBs
Position
13:39707916..39813534
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AA seq
843 aa
AA seq
DB search
MAADIGELLVPYMPTIRVPRSGDRVYKSECAFSFDSPESEGGLYVCMSTFLGFGREHVER
HYRKTGQCVYMHLKRTIKEKATGASGGGVPKKKSQVIFELEKNEDLNNEDYEYEDEAKLV
IFPDHYEIPLPNIEELPALVTIACDAVLAARSPFEKQDSESWEEELKDSKHENNLQQLDN
GVRIPPSGWKCAWCDLRENLWLNLTDGTILCGKWFFDGSGGNGHALQHYRETGYPLAVKL
GTITPDGADVYSFDEEEAVLDANLAEHLMHFGIDMLTMQKSENVNPVEIKPRISEWEMVQ
ESGMKLKPMYGSGYTGIKNLGNSCYLSSVMQIIFSIPDFQRRYVGNLQRIFDYSPLDPTQ
DFDTQMAKLGHGLLSGQYSKPPMKSEVIEQVMKEECKPHPQGMAPRMFKALIGKGHPEFS
SNRQQDALEFFLHLINLINRNNNGSDDPSEVFRFMVEDRVQCCQSRKVKYKQRVDYIMQL
PIVIEAASNKEELLAYELRRREAEIAKRPLREVVRAKVPFSACLQAFQEPENVTDFWSSA
LQAKSAAVKTIHFASFPEYLVIQLKKFTFGVDWVPKKLDVSIDMPDLLDISHLKATGLQP
GEEELPDISPPIIMPDQPKGSLLNHFMESPEIDESAVMQLAEMGFPLEACRKAVYYTGNL
GAELAFNWIIAHMEEPDFAEPLLPTGYNDVSHSEVGLAGGASSTENQPPEEIVAIITSMG
FPRNKAIHALKATNNNLERALDWIFTHANNEDENETASDIDTQSQIETNAETEPVGPRIK
DGPGRYELFAFISHVGPSTMSGHYVCHIRKEGRWIIYNDHKVCASEKPPKDLGYIYFYQR
MPY
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacatcggagaactgctggtgccgtacatgccaaccatccgagtccctaga
tcaggggacagggtttacaagagcgaatgcgccttctcctttgactccccagaatctgaa
ggtggtctttatgtgtgtatgagtacttttctcgggtttggaagggaacatgtagaaaga
cattatcgcaaaacagggcaatgtgtctacatgcatctgaaacgtaccattaaggagaaa
gccactggagcttctggtggaggtgtacctaagaagaaatctcaggtcatttttgaactg
gagaagaatgaagacctcaacaatgaagattatgaatatgaagatgaagctaaacttgtt
atatttcctgaccactatgaaattcctttgccaaacatagaggagttgccagcactggta
acaatagcatgtgatgctgtcctagctgcaaggtctccatttgaaaaacaggattccgaa
tcatgggaagaggaacttaaagactcaaaacatgagaataatcttcaacaactggataat
ggagtccgtattccacccagtggctggaaatgtgcctggtgtgacctgagggagaatctt
tggctaaatctgacagatggcaccatattatgtgggaaatggttctttgacggcagtggt
ggaaatggacatgctctccaacattaccgtgagacaggttaccctttggcagttaaatta
ggaaccatcactccagatggcgcagatgtatactcatttgatgaagaggaagcagtgcta
gatgcaaatcttgcagaacacttgatgcattttggtattgacatgttgacaatgcaaaag
tcagaaaatgttaatcctgtcgaaatcaaaccacgaatcagtgagtgggagatggttcaa
gaatccggtatgaagttgaagccaatgtatggttctggatacactggaatcaagaacctt
ggaaacagctgctacctcagctctgttatgcagataatcttcagcatacccgactttcag
cggagatacgttggaaacctccaaagaatatttgattactcccctctagatccaactcaa
gattttgatacacagatggccaaactgggtcatggacttctctcaggccagtactccaaa
cctccaatgaaatcagaagtgattgaacaggtgatgaaagaagaatgcaagcctcatcca
caaggaatggcacccagaatgtttaaagcattaattggaaaaggacatccagaattttca
tcaaatcggcagcaggacgcattagaattctttttgcacttgatcaaccttataaataga
aacaacaatggctcagatgatcccagtgaagtctttcgttttatggtagaagaccgggtc
cagtgttgccagtccaggaaagtcaagtacaagcagagagtggattacatcatgcaactt
cctattgtcatagaggctgctagtaataaagaggagcttttagcatatgaattaaggagg
agagaggctgagatagcaaagagacctttacgagaagttgtccgtgccaaggttccattt
agtgcctgccttcaagcttttcaagagccagaaaacgtcactgacttctggagcagtgca
ctccaagcaaagtcagcagcagtaaaaacaatccattttgcttcatttcctgaatatttg
gttattcaactaaagaaattcactttcggtgtagactgggtaccaaagaaattagacgtc
tccatagatatgccagatctcctggatatctcccacttgaaggcaacaggtttacagcct
ggagaagaggaactgcctgatatttccccacccatcatcatgcctgatcaacccaaaggc
agtctgctgaaccatttcatggagtctcctgaaattgatgaatcggcagtgatgcagctg
gctgagatgggttttccgcttgaggcgtgtcgcaaagcagtctactacacaggaaacctg
ggggctgagttggcctttaactggatcatagcacacatggaggaacctgattttgctgaa
ccactattaccaacaggatataatgatgttagtcatagtgaagttggcctagcaggaggg
gcctcttcaacggaaaaccagccaccagaagaaattgttgccatcattacgtcaatggga
tttcccaggaacaaggccattcatgcactgaaagcaactaataacaatctggagagagca
ttggactggatcttcacacatgcaaacaatgaggatgagaacgagacagcctcggatatt
gatacacagtcacaaattgaaacaaatgcagaaacagaaccagtagggcccagaatcaag
gatggacctggaagatatgagctgtttgcctttattagccatgtgggaccatctacaatg
tctggtcattatgtctgccatattcggaaggagggaaggtggataatctataatgaccat
aaagtctgtgcttcagagaaaccccctaaagacctgggatacatttacttttatcagcgg
atgccctactaa
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