KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122555954
Entry
122555954         CDS       T08871                                 
Symbol
polr2h
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03020  RNA polymerase
cpla03420  Nucleotide excision repair
cpla04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    122555954 (polr2h)
  09124 Replication and repair
   03420 Nucleotide excision repair
    122555954 (polr2h)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    122555954 (polr2h)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpla03021]
    122555954 (polr2h)
   03400 DNA repair and recombination proteins [BR:cpla03400]
    122555954 (polr2h)
Transcription machinery [BR:cpla03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     122555954 (polr2h)
  RNA polymerase III system
   RNA polymerase III
     122555954 (polr2h)
  RNA polymerase I system
   RNA polymerase I
     122555954 (polr2h)
DNA repair and recombination proteins [BR:cpla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      122555954 (polr2h)
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 122555954
NCBI-ProteinID: XP_043558190
LinkDB
Position
13:complement(44033675..44046365)
AA seq 150 aa
MAGILFEDIFDVKDIDPEGIKFDRVSRLHCESESFKMDLILDVNIQIYPVELGDKFRLVI
ASTLYEDGTPDDGEYNPTDDRPSRADQFEYVMYGKVYRIEGDESSTEAATRLSAYVSYGG
LLMRLQGDANNLHGFEVDSRVYLLMKKLAF
NT seq 453 nt   +upstreamnt  +downstreamnt
atggcaggaattttatttgaggatatctttgatgtgaaggatattgacccggaaggtata
aagtttgacagagtttctcgcttacactgtgaaagtgaatcctttaaaatggatctaata
cttgatgtaaacattcagatttaccctgttgaactaggtgacaagtttcgtcttgtgata
gcaagtactctttatgaagatggaacgccagatgatggagagtataatcccacagatgac
cggccatcgagggctgaccaatttgagtatgtcatgtatggaaaggtttatagaatagaa
ggcgatgagagttcaactgaagcagccaccagactatcagcctatgtatcatatggaggt
ctactgatgaggcttcaaggtgatgcaaataacttacacggctttgaagtagattccaga
gtctacctgttaatgaagaagcttgctttttaa

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