Chiloscyllium plagiosum (whitespotted bambooshark): 122555982
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Entry
122555982 CDS
T08871
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4 gamma 1-like
KO
K03260
translation initiation factor 4G
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122555982
03012 Translation factors [BR:
cpla03012
]
122555982
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122555982
mRNA cycle factors
Stress granule specific factors
122555982
Translation factors [BR:
cpla03012
]
Eukaryotic type
Initiation factors
eIF-4
122555982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
Motif
Other DBs
NCBI-GeneID:
122555982
NCBI-ProteinID:
XP_043558257
LinkDB
All DBs
Position
13:complement(48185819..48296612)
Genome browser
AA seq
1719 aa
AA seq
DB search
MNKGPQPIGGPPAAPHPSPSGISQTAYPSSQTTAPVVFAPQQTPQMNTQPQPRQFAAGPR
ALHQQYYPNRAQQQSSASRVQSSATTRPVASATHVYPPGSQTIMMMAQQIPTYPSSGPYY
VPNQFRSSFVQPAQQYPVPPGTGFYSNPNPGDYPFGTYYPATQGVQQYSTPVAPPTVMIN
PAQPQMPPKRERKQIRIRDPNQGGKDITEEIMSGGRSGSTPTPPQSAVGNMEGGGNVQTN
GENPHPVPVIIRPDKPKSPAVATKPVEELNKPEKSITPESVESKPELNTNLTDSEELSKV
PVTEPDDTKPTVVCYDVAVTDPVQSDHDNEINPLPEPVSLPPVANEMQESEAENVRELQK
EEEVIVDESSSKDLENMESNGVIAGQVDEPCQNSETPLEPSLEPPLEPPLEPSLEPSLGP
PLGPPLGPPLGHLDLHLDLHLDLHLDLHLDLHLNLHLDLHLNLHLNLHLDFHLDFHLDFH
LDLHLDLHLDLHLDLHLDLHLDLHLDLHLDLHLDLHLINHQIVMDSPIAQPEELKVSNGP
ELSTEQDSEVLEAQQESDISPISEPEATKTEESAVGLTSEEKEEEDIVEIECQDASPTAA
ALSQMNDNPMQAAAVSVPKKKRKLKDLNKKEAVGDLLDAFKESQVKEPVAESDAQPAAVS
VEVTETIASTRDEPEETWEEKEDKQDVENIKPDGIKLLDQKYQYKEENWKPLNPEDKKKY
DREFLLGFQFIFASMQKPEGLPAISDVVLDKANKTPLRPLDPSRLTGMNCGPDFTPPFAN
LGRQPIGRGLPSGVGPRRSQQGPRKEPRKIIATVSLNDDIQLKKAEHAWKPSVKKPTEED
DPEMIKTQELFRKVRSILNKLTPQMFQQLMKQVADLTIDNEERLKGVIDLVFEKAISEPN
FSVAYANMCRCLTTLKVPIPDKPGATVNFRKLLLNRCQKEFEKDKDDDAVIDKKQKEIDA
AVMSEEKARLQEELKDARDKARRRSLGNIKFIGELFKLKMLTEPIMHDCIVKLLKNHDEE
SLECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEKIIKERKTSSRIRFMVQDVIDLRQNNW
VPRRGDQGPKTLEQIHRDAQIEEHQQQLRVQQQLLSKQDKRRVAPGTSCAGVRGSQGIDE
AGWNTVPIAKNSRPIDTNRLSKITKPGAMDYNNQVLAPAGRLGGWVKGSSGGSGSKSSDT
GVDSGRPATATLNRFSALQQSSSTDSFDARRVVPRSSSSRDRSEKGERERGDRFERSERH
DRNEKSDHGEKSDKSDRAEKLERSDRNRPQLTKRSYSKEVDDRSRERERRSSQEPVRRVA
SMTEERDRGHVRDQSRESVKLEPVSVTPDKPALSEEEFEKKSKAIIEEYLHINDIKEASQ
CVQELESPKTLHIFVRSGIESTLERSALAREHMGILLYHLVKAGTLSKEQYCKGLHEILE
VAEDMEIDIPHIWQYLAELIVHMLYDGGLPMGDLFREVAKPLIPIGKAGLLLADLLCLLC
KGMSRKKVGSLWREGGLSWKEFLPEEKDINQFVTEKKVEFTLGNESNHEESSSKTEISFN
DLCEQFDKLIKEKADNQRIFDWIEANIDEKQIVSSVFIRALMKSVCHSAVVFENPIRVDT
EVVQNRVKVLTKYLDSDPQRELQALYALQGLMAKLEQPPNLLRTFFDVLYDEDVISEEAF
YKWESSKDPAEQQGKGVALKSVTAFFTWLREAEEESEGN
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagggccccagcctattggaggacctccagctgccccacatccctccccttct
gggatttctcagactgcctatccctctagccagacaactgctccagtagtttttgcacca
cagcaaactccacaaatgaacactcaaccacaaccacggcagtttgctgcaggtcctcga
gctttacatcagcaatactacccaaacagagcccagcaacagagtagtgcttccagggtt
cagagtagtgcaacgactcgacctgtggcctctgctactcatgtctacccacctggttca
cagaccattatgatgatggcgcaacagatacccacctatccatcatcaggaccttattat
gttcccaatcagtttcgttcttcatttgtacaaccagcacaacagtatcctgttccacct
ggaactggattttattcaaacccaaatcctggggattacccttttggaacctattaccca
gcaacacagggtgtgcaacaatattctacaccagtggcacctcccactgttatgataaat
cctgcacagccacaaatgcctcctaaaagagaacgtaaacagatccggataagggatcca
aaccagggtggaaaagacatcacagaagagattatgtctggaggaagatcaggctctaca
ccaacaccaccacagtctgcagtaggaaatatggagggaggtggaaacgtacagactaac
ggggaaaatcctcatccagtgccagtcattatccgaccagataagccaaagtctcctgca
gtggcaactaaaccagtagaagagttgaacaaacctgaaaaatctattacacctgaaagt
gtggaaagcaagcctgaactcaacactaacttaacagactctgaggaattatcaaaagta
ccggtcactgagccagatgacactaaacccactgtagtctgttatgatgtggctgtgaca
gatcctgtacaatctgatcatgataatgaaattaatcctttgcctgaacctgtgtctttg
cctcccgtagcaaatgaaatgcaggaaagtgaagcagagaatgtacgagaactacaaaaa
gaggaggaagtgattgtagatgaatcgagctcaaaggatttggagaacatggagagtaat
ggtgttatagcaggacaagtagatgaaccttgtcaaaattctgaaactccacttgaacct
tcacttgaacctccacttgaacctccacttgaaccttcacttgaaccttcacttggacct
ccacttggacctccacttggacctccacttggacacttggacctccacttggacctccac
ttggacctccacttggacctccacttggacctccacttgaacctccacttggacctccac
ttgaacctccacttgaacctccacttggacttccacttggacttccacttggacttccac
ttggaccttcacttggaccttcacttggaccttcacttggaccttcacttggaccttcac
ttggacctccacttggacctccacttggacctccacttggaccttcacttgataaaccac
caaattgtaatggattcacccattgcacaacctgaagaactgaaggtatccaatggtccg
gagctttcaacagagcaggattcagaagttttagaagctcagcaggaatctgacatcagc
ccaatttctgaacctgaagcaacaaaaactgaagagagtgctgtaggcttgacatctgag
gagaaggaagaagaggacattgtagaaattgaatgtcaagatgcttcaccaacagcagca
gctttatcccagatgaatgacaatcctatgcaagctgcagctgtatctgtgccaaagaag
aaaaggaagttgaaggacttaaataagaaagaagcagttggtgatcttctagatgctttt
aaagagtctcaagtaaaagaacctgtagcagagtctgatgcccagcctgctgctgtatct
gttgaagtgactgaaacaattgcttccacccgtgacgagccagaggaaacatgggaagaa
aaggaagacaagcaagatgtagagaacatcaagccagatggaatcaaattgttagatcaa
aaatatcaatataaggaagagaattggaaaccacttaatcctgaagacaagaagaaatac
gaccgcgaatttctcttggggttccaattcatctttgccagcatgcagaaacctgaaggc
ctgcctgctattagtgatgttgtgttggataaggcaaacaagactccacttcgtcccctt
gacccaagcagactgactggaatgaactgtggcccagacttcacaccaccttttgcaaat
ctaggaagacagccaattgggagaggcctaccttcaggtgtgggtccaagaagatctcag
caaggcccaagaaaagagccacgcaaaattattgcaactgtctctctaaatgatgacata
caacttaagaaggcagaacatgcctggaaaccttctgtaaaaaaaccaactgaggaggat
gaccctgaaatgataaaaactcaggagctgttccgaaaggttcgcagtattttgaacaaa
ttgacccctcagatgttccagcagttgatgaaacaggtggcagatttgacaattgacaat
gaagagcggttaaagggagtaattgatctggtctttgaaaaagctatttctgaaccaaac
ttctccgttgcctatgccaacatgtgccgctgtcttacaacacttaaagttccaatacca
gataaacctggagcaacagtgaattttcggaagttgctgttgaacagatgtcaaaaggag
tttgaaaaagacaaagatgatgatgcagtaatagataaaaaacagaaagaaattgatgct
gctgttatgtcagaggagaaagcccgcctccaagaagagctaaaggatgcaagagataaa
gctagacgtcgatcactaggcaatatcaaattcattggtgaacttttcaaactgaaaatg
ttaacagaaccaattatgcatgactgtatagtgaagctgctaaagaatcatgatgaagaa
tcacttgaatgcctatgtaggttattaacaacaataggcaaagacttggattttgaaaaa
gccaaacctagaatggatcaatattttaatcagatggaaaaaattattaaagaaaggaaa
acttcatctcggattcgctttatggtacaggatgtgatcgatcttcgacaaaataactgg
gtgccgcgaagaggagatcagggacccaagacattagaacagattcaccgagatgctcag
atagaagaacatcaacagcagttaagagtacaacagcagctcctatccaaacaggataaa
aggagggttgctccaggcaccagttgtgctggtgtccgaggaagtcaaggcattgatgaa
gctggatggaatactgtgccaattgccaaaaatagtagaccaattgatactaatcggcta
agcaagattactaagccaggggccatggattacaataatcaagtgttggcaccagcaggt
cgacttggcggctgggttaaaggaagcagtggtggatctggaagcaagtctagtgataca
ggtgtggattcaggaaggccagccacagcgacattgaacagattttcagcgctccaacag
tcgtcatctacagacagttttgatgcacggagagttgtccccaggagcagttcaagtcgt
gatagaagtgaaaaaggcgagcgtgagagaggagacagatttgaaaggagcgaacgtcac
gacagaaatgagaaaagtgatcatggtgaaaagagtgataaaagtgatcgtgctgagaaa
ctggagagaagtgatcgtaacagacctcaacttactaagagaagctacagcaaagaagta
gatgaccgaagcagggagcgagagcgacgaagttctcaagaaccagtcagacgtgtagcc
agcatgacagaagaaagagatcgaggacatgtgcgagatcagagcagagaatctgttaag
cttgagcctgtctctgtgacacctgataaacctgccctgtccgaggaagagtttgaaaag
aaatccaaggcaatcattgaagagtatttgcatatcaatgatataaaggaagcatcgcag
tgcgtgcaggagcttgaatcaccgaagactttgcacatctttgttcgaagtggcattgaa
tcaactttggagagaagtgcacttgcaagagaacacatgggaattctgttatatcacctt
gtaaaagctggtactctatcaaaggaacagtactgcaaaggactacatgaaatccttgaa
gtagctgaagatatggaaattgatatcccacatatatggcaatatcttgctgaactaatt
gttcacatgctatatgatggaggcttaccaatgggagatcttttcagagaagtggccaaa
ccactgatccctattggaaaggctggccttctgcttgctgatctactgtgtttactttgc
aaaggaatgagccgtaaaaaggtaggctctttgtggagagaaggtggtctcagctggaag
gaattccttcctgaggaaaaagacatcaaccaatttgtcacagagaagaaagtggagttt
actctgggaaatgaatctaatcatgaggaatcatcaagcaaaactgaaatatcttttaat
gacctgtgtgaacagtttgataagttgatcaaggagaaagctgacaaccaaagaatattt
gactggattgaagccaacattgatgaaaagcaaattgtttcatcagtgttcattagagca
ttaatgaaatcggtttgtcattctgctgttgtatttgaaaacccaattcgtgtggataca
gaggttgtccaaaatagagtcaaggtcctaacgaaatacttggattctgatccccagcgt
gaactgcaagcactctatgcccttcagggcttaatggccaaattagagcagccaccaaac
ttattaaggacatttttcgatgttttgtatgatgaggatgttatatccgaagaagccttt
tacaagtgggagtcaagtaaagacccagctgagcaacaaggcaaaggagtagctttgaaa
tctgtgacagctttcttcacttggttaagagaagctgaagaagaatcagaaggaaattag
DBGET
integrated database retrieval system
